RNA–Protein interactions for RNA: ENST00000455999.5

UBE2F-219, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 5

Gene UBE2F, Length 760 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-219ENST00000455999 ITGB4P16144 1822 aa20.99■□□□□ 0.95
UBE2F-219ENST00000455999 GPR162Q16538 588 aa20.99■□□□□ 0.95
UBE2F-219ENST00000455999 C5P01031 1676 aa20.99■□□□□ 0.95
UBE2F-219ENST00000455999 ANKRD36BQ8N2N9 1353 aa20.98■□□□□ 0.95
UBE2F-219ENST00000455999 HOXC9P31274 260 aa20.98■□□□□ 0.95
UBE2F-219ENST00000455999 SLC16A10Q8TF71 515 aa20.98■□□□□ 0.95
UBE2F-219ENST00000455999 KIF20BQ96Q89 1820 aa20.98■□□□□ 0.95
UBE2F-219ENST00000455999 PUS7Q96PZ0 661 aaKnown RBP20.97■□□□□ 0.95
UBE2F-219ENST00000455999 TFCP2L1Q9NZI6 479 aa20.97■□□□□ 0.95
UBE2F-219ENST00000455999 AMPHP49418 695 aa20.96■□□□□ 0.95
UBE2F-219ENST00000455999 PELP1Q8IZL8 1130 aaKnown RBP20.96■□□□□ 0.95
UBE2F-219ENST00000455999 COG3Q96JB2 828 aa20.96■□□□□ 0.95
UBE2F-219ENST00000455999 TESK2Q96S53 571 aa20.96■□□□□ 0.95
UBE2F-219ENST00000455999 TONSLQ96HA7 1378 aa20.96■□□□□ 0.95
UBE2F-219ENST00000455999 POLD1P28340 1107 aa20.95■□□□□ 0.94
UBE2F-219ENST00000455999 C1QTNF8P60827 252 aa20.95■□□□□ 0.94
UBE2F-219ENST00000455999 NLGN2Q8NFZ4 835 aa20.95■□□□□ 0.94
UBE2F-219ENST00000455999 ZCRB1Q8TBF4 217 aaKnown RBP20.95■□□□□ 0.94
UBE2F-219ENST00000455999 SENP3-EIF4A1A0A087X0R7 540 aa20.94■□□□□ 0.94
UBE2F-219ENST00000455999 ST20-MTHFSA0A0A6YYL1 179 aa20.93■□□□□ 0.94
UBE2F-219ENST00000455999 TOGARAM1Q9Y4F4 1720 aa20.92■□□□□ 0.94
UBE2F-219ENST00000455999 RRS1Q15050 365 aaKnown RBP20.92■□□□□ 0.94
UBE2F-219ENST00000455999 USHBP1Q8N6Y0 703 aa20.92■□□□□ 0.94
UBE2F-219ENST00000455999 CCNL1Q9UK58 526 aaPredicted RBP20.92■□□□□ 0.94
UBE2F-219ENST00000455999 NBPF6Q5VWK0 638 aa20.91■□□□□ 0.94
UBE2F-219ENST00000455999 NBPF4Q96M43 638 aa20.91■□□□□ 0.94
UBE2F-219ENST00000455999 GOLGB1Q14789 3259 aaKnown RBP20.91■□□□□ 0.94
UBE2F-219ENST00000455999 COL23A1Q86Y22 540 aaPredicted RBP20.9■□□□□ 0.94
UBE2F-219ENST00000455999 UBR3Q6ZT12 1888 aa20.89■□□□□ 0.93
UBE2F-219ENST00000455999 MSH5O43196 834 aa20.88■□□□□ 0.93
UBE2F-219ENST00000455999 GGNBP2Q9H3C7 697 aa20.88■□□□□ 0.93
UBE2F-219ENST00000455999 MAP2P11137 1827 aaKnown RBP20.88■□□□□ 0.93
UBE2F-219ENST00000455999 RTL1A6NKG5 1358 aa20.87■□□□□ 0.93
UBE2F-219ENST00000455999 USP47Q96K76 1375 aa20.87■□□□□ 0.93
UBE2F-219ENST00000455999 YBX3P16989 372 aaKnown RBP eCLIP20.87■□□□□ 0.931e-6■■□□□ 11.6
UBE2F-219ENST00000455999 MSL1Q68DK7 614 aa20.87■□□□□ 0.93
UBE2F-219ENST00000455999 FYB1O15117 783 aa20.86■□□□□ 0.93
UBE2F-219ENST00000455999 PKD1L3Q7Z443 1732 aa20.86■□□□□ 0.93
UBE2F-219ENST00000455999 C4BP0C0L5 1744 aa20.85■□□□□ 0.93
UBE2F-219ENST00000455999 GIGYF1O75420 1035 aaPredicted RBP20.84■□□□□ 0.93
UBE2F-219ENST00000455999 HSP90AB2PQ58FF8 381 aa20.83■□□□□ 0.93
UBE2F-219ENST00000455999 RAPGEF4Q8WZA2 1011 aa20.83■□□□□ 0.93
UBE2F-219ENST00000455999 SMG6Q86US8 1419 aaKnown RBP20.83■□□□□ 0.93
UBE2F-219ENST00000455999 CGNL1Q0VF96 1302 aa20.81■□□□□ 0.92
UBE2F-219ENST00000455999 TATP17735 454 aaPredicted RBP20.81■□□□□ 0.92
UBE2F-219ENST00000455999 MPRIPQ6WCQ1 1025 aa20.8■□□□□ 0.92
UBE2F-219ENST00000455999 ANKRD26Q9UPS8 1709 aa20.8■□□□□ 0.92
UBE2F-219ENST00000455999 INSRP06213 1382 aa20.8■□□□□ 0.92
UBE2F-219ENST00000455999 PALLDQ8WX93 1383 aa20.8■□□□□ 0.92
UBE2F-219ENST00000455999 PCDH11XQ9BZA7 1347 aa20.79■□□□□ 0.92
UBE2F-219ENST00000455999 PCDH11YQ9BZA8 1340 aa20.79■□□□□ 0.92
UBE2F-219ENST00000455999 CYP27B1O15528 508 aa20.78■□□□□ 0.92
UBE2F-219ENST00000455999 GRIN3BO60391 1043 aa20.78■□□□□ 0.92
UBE2F-219ENST00000455999 AMIGO3Q86WK7 504 aa20.78■□□□□ 0.92
UBE2F-219ENST00000455999 FLT4P35916 1363 aa20.77■□□□□ 0.92
UBE2F-219ENST00000455999 TMF1P82094 1093 aa20.77■□□□□ 0.92
UBE2F-219ENST00000455999 SMIM5Q71RC9 77 aa20.77■□□□□ 0.92
UBE2F-219ENST00000455999 SLC24A1O60721 1099 aa20.76■□□□□ 0.91
UBE2F-219ENST00000455999 EMILIN1Q9Y6C2 1016 aa20.75■□□□□ 0.91
UBE2F-219ENST00000455999 ATP10DQ9P241 1426 aa20.75■□□□□ 0.91
UBE2F-219ENST00000455999 CARD14Q9BXL6 1004 aa20.73■□□□□ 0.91
UBE2F-219ENST00000455999 CD2APQ9Y5K6 639 aa20.73■□□□□ 0.91
UBE2F-219ENST00000455999 FLAD1Q8NFF5 587 aa20.72■□□□□ 0.91
UBE2F-219ENST00000455999 WWC3Q9ULE0 1092 aa20.72■□□□□ 0.91
UBE2F-219ENST00000455999 N4BP2Q86UW6 1770 aaPredicted RBP20.72■□□□□ 0.91
UBE2F-219ENST00000455999 KIF24Q5T7B8 1368 aa20.72■□□□□ 0.91
UBE2F-219ENST00000455999 NCAPD2Q15021 1401 aa20.71■□□□□ 0.91
UBE2F-219ENST00000455999 PHF14O94880 888 aa20.71■□□□□ 0.91
UBE2F-219ENST00000455999 PIGBQ92521 554 aa20.71■□□□□ 0.91
UBE2F-219ENST00000455999 AK7Q96M32 723 aa20.71■□□□□ 0.91
UBE2F-219ENST00000455999 KIF13BQ9NQT8 1826 aa20.7■□□□□ 0.9
UBE2F-219ENST00000455999 NSD3Q9BZ95 1437 aa20.7■□□□□ 0.9
UBE2F-219ENST00000455999 SMARCC1Q92922 1105 aaPredicted RBP20.69■□□□□ 0.9
UBE2F-219ENST00000455999 KIAA1551Q9HCM1 1747 aa20.69■□□□□ 0.9
UBE2F-219ENST00000455999 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.68■□□□□ 0.9
UBE2F-219ENST00000455999 PPM1GO15355 546 aaPredicted RBP20.68■□□□□ 0.9
UBE2F-219ENST00000455999 ADCY9O60503 1353 aa20.68■□□□□ 0.9
UBE2F-219ENST00000455999 LINC00116Q8NCU8 138 aa20.67■□□□□ 0.9
UBE2F-219ENST00000455999 ZNF526Q8TF50 670 aaPredicted RBP20.67■□□□□ 0.9
UBE2F-219ENST00000455999 IGSF1Q8N6C5 1336 aa20.67■□□□□ 0.9
UBE2F-219ENST00000455999 NKX1-1Q15270 411 aaPredicted RBP20.66■□□□□ 0.9
UBE2F-219ENST00000455999 MYH14Q7Z406 1995 aaKnown RBP20.65■□□□□ 0.9
UBE2F-219ENST00000455999 LOC102724428A0A0B4J2F2 783 aa20.65■□□□□ 0.9
UBE2F-219ENST00000455999 SIK1P57059 783 aa20.65■□□□□ 0.9
UBE2F-219ENST00000455999 EYA1Q99502 592 aa20.65■□□□□ 0.9
UBE2F-219ENST00000455999 GPBP1L1Q9HC44 474 aaPredicted RBP20.65■□□□□ 0.9
UBE2F-219ENST00000455999 BRCA1P38398 1863 aaKnown RBP20.64■□□□□ 0.9
UBE2F-219ENST00000455999 COL5A3P25940 1745 aaPredicted RBP20.64■□□□□ 0.9
UBE2F-219ENST00000455999 ITPK1Q13572 414 aa20.64■□□□□ 0.89
UBE2F-219ENST00000455999 ASAP1Q9ULH1 1129 aa20.64■□□□□ 0.89
UBE2F-219ENST00000455999 HMGB2P26583 209 aaKnown RBP20.63■□□□□ 0.89
UBE2F-219ENST00000455999 CDCA8Q53HL2 280 aa20.63■□□□□ 0.89
UBE2F-219ENST00000455999 SPG7Q9UQ90 795 aa20.63■□□□□ 0.89
UBE2F-219ENST00000455999 WASHC2AQ641Q2 1341 aa20.62■□□□□ 0.89
UBE2F-219ENST00000455999 CEP350Q5VT06 3117 aa20.62■□□□□ 0.89
UBE2F-219ENST00000455999 SSFA2P28290 1259 aa20.62■□□□□ 0.89
UBE2F-219ENST00000455999 TMOD3Q9NYL9 352 aa20.61■□□□□ 0.89
UBE2F-219ENST00000455999 C4AP0C0L4 1744 aa20.61■□□□□ 0.89
UBE2F-219ENST00000455999 GNPATO15228 680 aa20.6■□□□□ 0.89
UBE2F-219ENST00000455999 PHKG2P15735 406 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms