RNA–Protein interactions for RNA: ENST00000455144.6

XPC-204, Transcript of XPC complex subunit, DNA damage recognition and repair factor, humanhuman

TSL 4

Gene XPC, Length 958 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPC-204ENST00000455144 HOXC9P31274 260 aa9.64□□□□□ -0.87
XPC-204ENST00000455144 TNS1Q9HBL0 1735 aaKnown RBP9.64□□□□□ -0.87
XPC-204ENST00000455144 DISP2A7MBM2 1401 aa9.64□□□□□ -0.87
XPC-204ENST00000455144 FLT4P35916 1363 aa9.63□□□□□ -0.87
XPC-204ENST00000455144 KNSTRNQ9Y448 316 aa9.63□□□□□ -0.87
XPC-204ENST00000455144 BCL9O00512 1426 aa9.63□□□□□ -0.87
XPC-204ENST00000455144 RGPD3A6NKT7 1758 aaPredicted RBP9.63□□□□□ -0.87
XPC-204ENST00000455144 RGPD4Q7Z3J3 1758 aa9.63□□□□□ -0.87
XPC-204ENST00000455144 APBA3O96018 575 aa9.62□□□□□ -0.87
XPC-204ENST00000455144 HMGB2P26583 209 aaKnown RBP9.62□□□□□ -0.87
XPC-204ENST00000455144 CARD14Q9BXL6 1004 aa9.62□□□□□ -0.87
XPC-204ENST00000455144 INSRP06213 1382 aa9.62□□□□□ -0.87
XPC-204ENST00000455144 TRIM37O94972 964 aa9.61□□□□□ -0.87
XPC-204ENST00000455144 NBPF14Q5TI25 921 aa9.61□□□□□ -0.87
XPC-204ENST00000455144 PANK3Q9H999 370 aa9.61□□□□□ -0.87
XPC-204ENST00000455144 TNS2Q63HR2 1409 aa9.61□□□□□ -0.87
XPC-204ENST00000455144 PEAK1Q9H792 1746 aa9.61□□□□□ -0.87
XPC-204ENST00000455144 RGPD2P0DJD1 1756 aa9.6□□□□□ -0.87
XPC-204ENST00000455144 FAM182BQ5T319 152 aa9.6□□□□□ -0.87
XPC-204ENST00000455144 DEFB132Q7Z7B7 95 aa9.6□□□□□ -0.87
XPC-204ENST00000455144 RAPGEF4Q8WZA2 1011 aa9.6□□□□□ -0.87
XPC-204ENST00000455144 LTV1Q96GA3 475 aaPredicted RBP9.6□□□□□ -0.87
XPC-204ENST00000455144 BCL11BQ9C0K0 894 aaPredicted RBP9.6□□□□□ -0.87
XPC-204ENST00000455144 SSUH2Q9Y2M2 353 aa9.6□□□□□ -0.87
XPC-204ENST00000455144 PLSCR1O15162 318 aa9.59□□□□□ -0.87
XPC-204ENST00000455144 TATP17735 454 aaPredicted RBP9.59□□□□□ -0.87
XPC-204ENST00000455144 EN1Q05925 392 aaPredicted RBP9.59□□□□□ -0.87
XPC-204ENST00000455144 RRS1Q15050 365 aaKnown RBP9.59□□□□□ -0.87
XPC-204ENST00000455144 WASHC2AQ641Q2 1341 aa9.58□□□□□ -0.88
XPC-204ENST00000455144 EP400Q96L91 3159 aa9.58□□□□□ -0.88
XPC-204ENST00000455144 MORC1Q86VD1 984 aa9.58□□□□□ -0.88
XPC-204ENST00000455144 REM2Q8IYK8 340 aaPredicted RBP9.58□□□□□ -0.88
XPC-204ENST00000455144 MARCH10Q8NA82 808 aaPredicted RBP9.58□□□□□ -0.88
XPC-204ENST00000455144 ZCRB1Q8TBF4 217 aaKnown RBP9.58□□□□□ -0.88
XPC-204ENST00000455144 PLEKHG2Q9H7P9 1386 aa9.58□□□□□ -0.88
XPC-204ENST00000455144 RREB1Q92766 1687 aa9.58□□□□□ -0.88
XPC-204ENST00000455144 PPM1GO15355 546 aaPredicted RBP9.57□□□□□ -0.88
XPC-204ENST00000455144 IFNLR1Q8IU57 520 aaPredicted RBP9.57□□□□□ -0.88
XPC-204ENST00000455144 CAMKK2Q96RR4 588 aa9.57□□□□□ -0.88
XPC-204ENST00000455144 NHSQ6T4R5 1651 aa9.57□□□□□ -0.88
XPC-204ENST00000455144 KIF7Q2M1P5 1343 aa9.56□□□□□ -0.88
XPC-204ENST00000455144 HSP90AB2PQ58FF8 381 aa9.56□□□□□ -0.88
XPC-204ENST00000455144 EZH2Q15910 746 aaKnown RBP9.55□□□□□ -0.88
XPC-204ENST00000455144 NBPF6Q5VWK0 638 aa9.55□□□□□ -0.88
XPC-204ENST00000455144 DDX54Q8TDD1 881 aaKnown RBP9.55□□□□□ -0.88
XPC-204ENST00000455144 NBPF4Q96M43 638 aa9.55□□□□□ -0.88
XPC-204ENST00000455144 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.55□□□□□ -0.881e-6■■□□□ 11.6
XPC-204ENST00000455144 POLKQ9UBT6 870 aa9.55□□□□□ -0.88
XPC-204ENST00000455144 SPG7Q9UQ90 795 aa9.55□□□□□ -0.88
XPC-204ENST00000455144 EMILIN1Q9Y6C2 1016 aa9.55□□□□□ -0.88
XPC-204ENST00000455144 BTAF1O14981 1849 aa9.54□□□□□ -0.88
XPC-204ENST00000455144 NUP188Q5SRE5 1749 aa9.54□□□□□ -0.88
XPC-204ENST00000455144 NPC1L1Q9UHC9 1359 aa9.54□□□□□ -0.88
XPC-204ENST00000455144 FBLN1P23142 703 aa9.54□□□□□ -0.88
XPC-204ENST00000455144 PCDH11XQ9BZA7 1347 aa9.54□□□□□ -0.88
XPC-204ENST00000455144 PCDH11YQ9BZA8 1340 aa9.54□□□□□ -0.88
XPC-204ENST00000455144 TNNT2P45379 298 aaPredicted RBP9.53□□□□□ -0.88
XPC-204ENST00000455144 PKD1L3Q7Z443 1732 aa9.53□□□□□ -0.88
XPC-204ENST00000455144 NCAPD2Q15021 1401 aa9.52□□□□□ -0.89
XPC-204ENST00000455144 DOT1LQ8TEK3 1739 aa9.52□□□□□ -0.89
XPC-204ENST00000455144 SHANK3Q9BYB0 1731 aa9.52□□□□□ -0.89
XPC-204ENST00000455144 HSP90AB1P08238 724 aaKnown RBP9.51□□□□□ -0.89
XPC-204ENST00000455144 SLC27A3Q5K4L6 730 aa9.51□□□□□ -0.89
XPC-204ENST00000455144 EYA1Q99502 592 aa9.51□□□□□ -0.89
XPC-204ENST00000455144 STK32BQ9NY57 414 aa9.51□□□□□ -0.89
XPC-204ENST00000455144 MEGF6O75095 1541 aa9.51□□□□□ -0.89
XPC-204ENST00000455144 LRP5O75197 1615 aa9.5□□□□□ -0.89
XPC-204ENST00000455144 ITGB4P16144 1822 aa9.5□□□□□ -0.89
XPC-204ENST00000455144 PER1O15534 1290 aaPredicted RBP9.5□□□□□ -0.89
XPC-204ENST00000455144 ZEB1P37275 1124 aaPredicted RBP9.5□□□□□ -0.89
XPC-204ENST00000455144 EIF4A2Q14240 407 aaKnown RBP9.5□□□□□ -0.89
XPC-204ENST00000455144 R3HDM1Q15032 1099 aaKnown RBP9.5□□□□□ -0.89
XPC-204ENST00000455144 TXNRD1Q16881 649 aa9.5□□□□□ -0.89
XPC-204ENST00000455144 AMOTQ4VCS5 1084 aa9.5□□□□□ -0.89
XPC-204ENST00000455144 PLEKHO1Q53GL0 409 aaPredicted RBP9.5□□□□□ -0.89
XPC-204ENST00000455144 IFNL2Q8IZJ0 200 aa9.5□□□□□ -0.89
XPC-204ENST00000455144 USHBP1Q8N6Y0 703 aa9.5□□□□□ -0.89
XPC-204ENST00000455144 SYTL4Q96C24 671 aaPredicted RBP9.5□□□□□ -0.89
XPC-204ENST00000455144 ACSBG1Q96GR2 724 aa9.5□□□□□ -0.89
XPC-204ENST00000455144 SMARCC1Q92922 1105 aaPredicted RBP9.49□□□□□ -0.89
XPC-204ENST00000455144 CFAP53Q96M91 514 aa9.49□□□□□ -0.89
XPC-204ENST00000455144 IGSF1Q8N6C5 1336 aa9.49□□□□□ -0.89
XPC-204ENST00000455144 LY75O60449 1722 aa9.48□□□□□ -0.89
XPC-204ENST00000455144 PSDA5PKW4 1024 aaPredicted RBP9.48□□□□□ -0.89
XPC-204ENST00000455144 KCNQ2O43526 872 aa9.48□□□□□ -0.89
XPC-204ENST00000455144 PRIM1P49642 420 aaKnown RBP9.48□□□□□ -0.89
XPC-204ENST00000455144 NKX1-1Q15270 411 aaPredicted RBP9.48□□□□□ -0.89
XPC-204ENST00000455144 QSER1Q2KHR3 1735 aa9.48□□□□□ -0.89
XPC-204ENST00000455144 PITPNM1O00562 1244 aa9.47□□□□□ -0.89
XPC-204ENST00000455144 DIAPH1O60610 1272 aaKnown RBP9.47□□□□□ -0.89
XPC-204ENST00000455144 MTHFSP49914 203 aa9.47□□□□□ -0.89
XPC-204ENST00000455144 CC2D1BQ5T0F9 858 aaKnown RBP9.47□□□□□ -0.89
XPC-204ENST00000455144 SLC15A2Q16348 729 aa9.46□□□□□ -0.9
XPC-204ENST00000455144 C1orf141Q5JVX7 400 aa9.46□□□□□ -0.9
XPC-204ENST00000455144 SPON1Q9HCB6 807 aa9.46□□□□□ -0.9
XPC-204ENST00000455144 NUDCQ9Y266 331 aa9.46□□□□□ -0.9
XPC-204ENST00000455144 CYP27B1O15528 508 aa9.45□□□□□ -0.9
XPC-204ENST00000455144 SLC16A10Q8TF71 515 aa9.45□□□□□ -0.9
XPC-204ENST00000455144 DCAF5Q96JK2 942 aa9.45□□□□□ -0.9
XPC-204ENST00000455144 TMOD3Q9NYL9 352 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms