RNA–Protein interactions for RNA: ENST00000453744.6

UBE2D3-210, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 3,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-210ENST00000453744 GADD45BO75293 160 aaPredicted RBP16.73■□□□□ 0.27
UBE2D3-210ENST00000453744 HS1BP3Q53T59 392 aa16.73■□□□□ 0.27
UBE2D3-210ENST00000453744 ANKRD44Q8N8A2 993 aa16.73■□□□□ 0.27
UBE2D3-210ENST00000453744 NAP1L2Q9ULW6 460 aaPredicted RBP16.73■□□□□ 0.27
UBE2D3-210ENST00000453744 NSD2O96028 1365 aa16.72■□□□□ 0.27
UBE2D3-210ENST00000453744 USP48Q86UV5 1035 aa16.72■□□□□ 0.27
UBE2D3-210ENST00000453744 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.72■□□□□ 0.276e-33■□□□□ 10.7
UBE2D3-210ENST00000453744 GOLGA6L6A8MZA4 724 aa16.72■□□□□ 0.27
UBE2D3-210ENST00000453744 RAPGEF3O95398 923 aa16.72■□□□□ 0.27
UBE2D3-210ENST00000453744 MCM2P49736 904 aa16.72■□□□□ 0.27
UBE2D3-210ENST00000453744 HMGN5P82970 282 aaKnown RBP16.72■□□□□ 0.27
UBE2D3-210ENST00000453744 ZNF771Q7L3S4 317 aaPredicted RBP16.72■□□□□ 0.27
UBE2D3-210ENST00000453744 NUTM1Q86Y26 1132 aa16.72■□□□□ 0.27
UBE2D3-210ENST00000453744 LRRCC1Q9C099 1032 aa16.72■□□□□ 0.27
UBE2D3-210ENST00000453744 RTEL1-TNFRSF6BF6WH68 1400 aa16.72■□□□□ 0.27
UBE2D3-210ENST00000453744 WDR33Q9C0J8 1336 aaKnown RBP16.72■□□□□ 0.27
UBE2D3-210ENST00000453744 PPP4R3BQ5MIZ7 849 aa16.71■□□□□ 0.27
UBE2D3-210ENST00000453744 CEP85Q6P2H3 762 aa16.71■□□□□ 0.27
UBE2D3-210ENST00000453744 TTC37Q6PGP7 1564 aa16.71■□□□□ 0.27
UBE2D3-210ENST00000453744 CD109Q6YHK3 1445 aa16.71■□□□□ 0.27
UBE2D3-210ENST00000453744 NOLC1Q14978 699 aaKnown RBP eCLIP16.71■□□□□ 0.27
UBE2D3-210ENST00000453744 GIMAP6Q6P9H5 292 aa16.71■□□□□ 0.27
UBE2D3-210ENST00000453744 SURF6O75683 361 aaKnown RBP16.7■□□□□ 0.26
UBE2D3-210ENST00000453744 GNAI2P04899 355 aa16.7■□□□□ 0.26
UBE2D3-210ENST00000453744 PDE1AP54750 535 aa16.7■□□□□ 0.26
UBE2D3-210ENST00000453744 CYB5RLQ6IPT4 315 aa16.7■□□□□ 0.26
UBE2D3-210ENST00000453744 AEBP1Q8IUX7 1158 aa16.7■□□□□ 0.26
UBE2D3-210ENST00000453744 EIF2S2P20042 333 aaKnown RBP16.7■□□□□ 0.26
UBE2D3-210ENST00000453744 MCM5P33992 734 aa16.7■□□□□ 0.26
UBE2D3-210ENST00000453744 CNPY2Q9Y2B0 182 aa16.7■□□□□ 0.26
UBE2D3-210ENST00000453744 ZNF500O60304 480 aaPredicted RBP16.7■□□□□ 0.26
UBE2D3-210ENST00000453744 FGD1P98174 961 aa16.7■□□□□ 0.26
UBE2D3-210ENST00000453744 FERMT3Q86UX7 667 aa16.7■□□□□ 0.26
UBE2D3-210ENST00000453744 MX1P20591 662 aa16.69■□□□□ 0.26
UBE2D3-210ENST00000453744 CAMK4Q16566 473 aa16.69■□□□□ 0.26
UBE2D3-210ENST00000453744 MADDQ8WXG6 1647 aa16.69■□□□□ 0.26
UBE2D3-210ENST00000453744 MYO5CQ9NQX4 1742 aa16.69■□□□□ 0.26
UBE2D3-210ENST00000453744 FBXW7Q969H0 707 aa16.69■□□□□ 0.26
UBE2D3-210ENST00000453744 ATP6V1DQ9Y5K8 247 aa16.69■□□□□ 0.26
UBE2D3-210ENST00000453744 RPGRIP1LQ68CZ1 1315 aa16.68■□□□□ 0.26
UBE2D3-210ENST00000453744 PDCL2Q8N4E4 241 aa16.68■□□□□ 0.26
UBE2D3-210ENST00000453744 DIAPH3Q9NSV4 1193 aa16.68■□□□□ 0.26
UBE2D3-210ENST00000453744 TXNDC2Q86VQ3 553 aa16.67■□□□□ 0.26
UBE2D3-210ENST00000453744 PALD1Q9ULE6 856 aa16.67■□□□□ 0.26
UBE2D3-210ENST00000453744 IQGAP3Q86VI3 1631 aa16.67■□□□□ 0.26
UBE2D3-210ENST00000453744 ADGRL1O94910 1474 aa16.67■□□□□ 0.26
UBE2D3-210ENST00000453744 NPHP1O15259 732 aa16.67■□□□□ 0.26
UBE2D3-210ENST00000453744 CWC27Q6UX04 472 aaKnown RBP16.67■□□□□ 0.26
UBE2D3-210ENST00000453744 ZDHHC9Q9Y397 364 aa16.67■□□□□ 0.26
UBE2D3-210ENST00000453744 AK9Q5TCS8 1911 aa16.66■□□□□ 0.26
UBE2D3-210ENST00000453744 FOSBP53539 338 aa16.66■□□□□ 0.26
UBE2D3-210ENST00000453744 CCDC183Q5T5S1 534 aa16.66■□□□□ 0.26
UBE2D3-210ENST00000453744 CCDC83Q8IWF9 413 aa16.66■□□□□ 0.26
UBE2D3-210ENST00000453744 ESYT1Q9BSJ8 1104 aa16.66■□□□□ 0.26
UBE2D3-210ENST00000453744 TRIM5Q9C035 493 aa16.66■□□□□ 0.26
UBE2D3-210ENST00000453744 FANCAO15360 1455 aa16.66■□□□□ 0.26
UBE2D3-210ENST00000453744 NCKAP5LQ9HCH0 1330 aa16.65■□□□□ 0.26
UBE2D3-210ENST00000453744 PREX2Q70Z35 1606 aa16.65■□□□□ 0.26
UBE2D3-210ENST00000453744 CDC42BPBQ9Y5S2 1711 aa16.65■□□□□ 0.26
UBE2D3-210ENST00000453744 UNC13BO14795 1591 aa16.65■□□□□ 0.26
UBE2D3-210ENST00000453744 LAMC1P11047 1609 aa16.65■□□□□ 0.26
UBE2D3-210ENST00000453744 AMPHP49418 695 aa16.65■□□□□ 0.26
UBE2D3-210ENST00000453744 FAM184AQ8NB25 1140 aa16.65■□□□□ 0.26
UBE2D3-210ENST00000453744 UBTFL1P0CB47 393 aaPredicted RBP16.64■□□□□ 0.25
UBE2D3-210ENST00000453744 CPA1P15085 419 aa16.64■□□□□ 0.25
UBE2D3-210ENST00000453744 CDK11BP21127 795 aaKnown RBP16.64■□□□□ 0.25
UBE2D3-210ENST00000453744 SPG7Q9UQ90 795 aa16.64■□□□□ 0.25
UBE2D3-210ENST00000453744 SBNO2Q9Y2G9 1366 aa16.64■□□□□ 0.25
UBE2D3-210ENST00000453744 G2E3Q7L622 706 aa16.64■□□□□ 0.25
UBE2D3-210ENST00000453744 TRPM2O94759 1503 aa16.64■□□□□ 0.25
UBE2D3-210ENST00000453744 NCOA3Q9Y6Q9 1424 aa16.64■□□□□ 0.25
UBE2D3-210ENST00000453744 CLTCL1P53675 1640 aa16.64■□□□□ 0.25
UBE2D3-210ENST00000453744 BICD2Q8TD16 824 aa16.64■□□□□ 0.25
UBE2D3-210ENST00000453744 ABCC4O15439 1325 aa16.64■□□□□ 0.25
UBE2D3-210ENST00000453744 TERF1P54274 439 aa16.63■□□□□ 0.25
UBE2D3-210ENST00000453744 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.63■□□□□ 0.25
UBE2D3-210ENST00000453744 FBXO31Q5XUX0 539 aaPredicted RBP16.63■□□□□ 0.25
UBE2D3-210ENST00000453744 CKAP2LQ8IYA6 745 aa16.63■□□□□ 0.25
UBE2D3-210ENST00000453744 CCDC94Q9BW85 323 aaPredicted RBP16.63■□□□□ 0.25
UBE2D3-210ENST00000453744 ZRSR1Q15695 479 aaKnown RBP16.63■□□□□ 0.25
UBE2D3-210ENST00000453744 MSH6P52701 1360 aa16.63■□□□□ 0.25
UBE2D3-210ENST00000453744 C16orf45Q96MC5 204 aaPredicted RBP16.62■□□□□ 0.25
UBE2D3-210ENST00000453744 GNAI3P08754 354 aa16.62■□□□□ 0.25
UBE2D3-210ENST00000453744 LRRFIP2Q9Y608 721 aaKnown RBP16.62■□□□□ 0.25
UBE2D3-210ENST00000453744 CASTP20810 708 aaKnown RBP16.62■□□□□ 0.25
UBE2D3-210ENST00000453744 CCT4P50991 539 aaKnown RBP16.62■□□□□ 0.25
UBE2D3-210ENST00000453744 PDLIM2Q96JY6 352 aa16.62■□□□□ 0.25
UBE2D3-210ENST00000453744 CCDC9Q9Y3X0 531 aaKnown RBP16.62■□□□□ 0.25
UBE2D3-210ENST00000453744 IBTKQ9P2D0 1353 aaPredicted RBP16.61■□□□□ 0.25
UBE2D3-210ENST00000453744 BRD1O95696 1058 aa16.61■□□□□ 0.25
UBE2D3-210ENST00000453744 CEBPZQ03701 1054 aaKnown RBP16.61■□□□□ 0.25
UBE2D3-210ENST00000453744 SRCIN1Q9C0H9 1055 aa16.61■□□□□ 0.25
UBE2D3-210ENST00000453744 STK3Q13188 491 aa16.61■□□□□ 0.25
UBE2D3-210ENST00000453744 TPD52L1Q16890 204 aaPredicted RBP16.61■□□□□ 0.25
UBE2D3-210ENST00000453744 JAKMIP1Q96N16 626 aaKnown RBP16.61■□□□□ 0.25
UBE2D3-210ENST00000453744 STX6O43752 255 aa16.6■□□□□ 0.25
UBE2D3-210ENST00000453744 CCDC192P0DO97 292 aa16.6■□□□□ 0.25
UBE2D3-210ENST00000453744 IQSEC2Q5JU85 1478 aa16.6■□□□□ 0.25
UBE2D3-210ENST00000453744 NUTM2GQ5VZR2 741 aa16.6■□□□□ 0.25
UBE2D3-210ENST00000453744 MYRIPQ8NFW9 859 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms