RNA–Protein interactions for RNA: ENST00000453341.1

TNFRSF25-208, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 1 (best)

Gene TNFRSF25, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-208ENST00000453341 ANKRD36BQ8N2N9 1353 aa31.02■■■□□ 2.56
TNFRSF25-208ENST00000453341 YBX3P16989 372 aaKnown RBP eCLIP31.01■■■□□ 2.55
TNFRSF25-208ENST00000453341 HDGFL2Q7Z4V5 671 aaPredicted RBP31.01■■■□□ 2.55
TNFRSF25-208ENST00000453341 LTV1Q96GA3 475 aaPredicted RBP31.01■■■□□ 2.55
TNFRSF25-208ENST00000453341 IFFO2Q5TF58 517 aa30.99■■■□□ 2.55
TNFRSF25-208ENST00000453341 A0A1W2PP64 1363 aa30.99■■■□□ 2.55
TNFRSF25-208ENST00000453341 NEUROD1Q13562 356 aa30.98■■■□□ 2.55
TNFRSF25-208ENST00000453341 RGPD2P0DJD1 1756 aa30.96■■■□□ 2.55
TNFRSF25-208ENST00000453341 CCNL1Q9UK58 526 aaPredicted RBP30.94■■■□□ 2.54
TNFRSF25-208ENST00000453341 COL23A1Q86Y22 540 aaPredicted RBP30.93■■■□□ 2.54
TNFRSF25-208ENST00000453341 MEGF6O75095 1541 aa30.93■■■□□ 2.54
TNFRSF25-208ENST00000453341 GRIN3BO60391 1043 aa30.92■■■□□ 2.54
TNFRSF25-208ENST00000453341 TERF2IPQ9NYB0 399 aa30.92■■■□□ 2.54
TNFRSF25-208ENST00000453341 MAP3K19Q56UN5 1328 aa30.91■■■□□ 2.54
TNFRSF25-208ENST00000453341 HOXC9P31274 260 aa30.9■■■□□ 2.54
TNFRSF25-208ENST00000453341 ZCRB1Q8TBF4 217 aaKnown RBP30.9■■■□□ 2.54
TNFRSF25-208ENST00000453341 CARD11Q9BXL7 1154 aa30.9■■■□□ 2.54
TNFRSF25-208ENST00000453341 MSH5O43196 834 aa30.89■■■□□ 2.54
TNFRSF25-208ENST00000453341 FBLN1P23142 703 aa30.89■■■□□ 2.54
TNFRSF25-208ENST00000453341 MSL1Q68DK7 614 aa30.89■■■□□ 2.54
TNFRSF25-208ENST00000453341 ATP10DQ9P241 1426 aa30.89■■■□□ 2.53
TNFRSF25-208ENST00000453341 USP47Q96K76 1375 aa30.85■■■□□ 2.53
TNFRSF25-208ENST00000453341 C5P01031 1676 aa30.84■■■□□ 2.53
TNFRSF25-208ENST00000453341 AMPHP49418 695 aa30.83■■■□□ 2.53
TNFRSF25-208ENST00000453341 COG3Q96JB2 828 aa30.82■■■□□ 2.52
TNFRSF25-208ENST00000453341 PUS7Q96PZ0 661 aaKnown RBP30.82■■■□□ 2.52
TNFRSF25-208ENST00000453341 NBPF6Q5VWK0 638 aa30.8■■■□□ 2.52
TNFRSF25-208ENST00000453341 NBPF4Q96M43 638 aa30.8■■■□□ 2.52
TNFRSF25-208ENST00000453341 TAF1LQ8IZX4 1826 aa30.79■■■□□ 2.52
TNFRSF25-208ENST00000453341 ADCY9O60503 1353 aa30.79■■■□□ 2.52
TNFRSF25-208ENST00000453341 USHBP1Q8N6Y0 703 aa30.78■■■□□ 2.52
TNFRSF25-208ENST00000453341 CD2APQ9Y5K6 639 aa30.78■■■□□ 2.52
TNFRSF25-208ENST00000453341 RTL1A6NKG5 1358 aa30.76■■■□□ 2.51
TNFRSF25-208ENST00000453341 GPBP1L1Q9HC44 474 aaPredicted RBP30.75■■■□□ 2.51
TNFRSF25-208ENST00000453341 RRS1Q15050 365 aaKnown RBP30.74■■■□□ 2.51
TNFRSF25-208ENST00000453341 CGNL1Q0VF96 1302 aa30.73■■■□□ 2.51
TNFRSF25-208ENST00000453341 PALLDQ8WX93 1383 aa30.72■■■□□ 2.51
TNFRSF25-208ENST00000453341 TESK2Q96S53 571 aa30.72■■■□□ 2.51
TNFRSF25-208ENST00000453341 TOGARAM1Q9Y4F4 1720 aa30.72■■■□□ 2.51
TNFRSF25-208ENST00000453341 AMIGO3Q86WK7 504 aa30.71■■■□□ 2.51
TNFRSF25-208ENST00000453341 FLAD1Q8NFF5 587 aa30.7■■■□□ 2.51
TNFRSF25-208ENST00000453341 ZNF526Q8TF50 670 aaPredicted RBP30.7■■■□□ 2.51
TNFRSF25-208ENST00000453341 RAPGEF4Q8WZA2 1011 aa30.7■■■□□ 2.51
TNFRSF25-208ENST00000453341 C4BP0C0L5 1744 aa30.7■■■□□ 2.5
TNFRSF25-208ENST00000453341 HSPA6P17066 643 aa30.69■■■□□ 2.5
TNFRSF25-208ENST00000453341 TATP17735 454 aaPredicted RBP30.67■■■□□ 2.5
TNFRSF25-208ENST00000453341 UBR3Q6ZT12 1888 aa30.66■■■□□ 2.5
TNFRSF25-208ENST00000453341 MPRIPQ6WCQ1 1025 aa30.66■■■□□ 2.5
TNFRSF25-208ENST00000453341 SMIM5Q71RC9 77 aa30.66■■■□□ 2.5
TNFRSF25-208ENST00000453341 WWC3Q9ULE0 1092 aa30.66■■■□□ 2.5
TNFRSF25-208ENST00000453341 PCDH11XQ9BZA7 1347 aa30.66■■■□□ 2.5
TNFRSF25-208ENST00000453341 PCDH11YQ9BZA8 1340 aa30.66■■■□□ 2.5
TNFRSF25-208ENST00000453341 ITGB4P16144 1822 aa30.66■■■□□ 2.5
TNFRSF25-208ENST00000453341 IGSF1Q8N6C5 1336 aa30.65■■■□□ 2.5
TNFRSF25-208ENST00000453341 SMG6Q86US8 1419 aaKnown RBP30.64■■■□□ 2.5
TNFRSF25-208ENST00000453341 ST20-MTHFSA0A0A6YYL1 179 aa30.64■■■□□ 2.5
TNFRSF25-208ENST00000453341 CYP27B1O15528 508 aa30.64■■■□□ 2.5
TNFRSF25-208ENST00000453341 GGNBP2Q9H3C7 697 aa30.64■■■□□ 2.5
TNFRSF25-208ENST00000453341 FYB1O15117 783 aa30.63■■■□□ 2.49
TNFRSF25-208ENST00000453341 HSP90AB2PQ58FF8 381 aa30.62■■■□□ 2.49
TNFRSF25-208ENST00000453341 AK7Q96M32 723 aa30.62■■■□□ 2.49
TNFRSF25-208ENST00000453341 PHF14O94880 888 aa30.61■■■□□ 2.49
TNFRSF25-208ENST00000453341 INSRP06213 1382 aa30.6■■■□□ 2.49
TNFRSF25-208ENST00000453341 HMGB2P26583 209 aaKnown RBP30.59■■■□□ 2.49
TNFRSF25-208ENST00000453341 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP30.58■■■□□ 2.49
TNFRSF25-208ENST00000453341 MAP2P11137 1827 aaKnown RBP30.58■■■□□ 2.49
TNFRSF25-208ENST00000453341 PKD1L3Q7Z443 1732 aa30.57■■■□□ 2.48
TNFRSF25-208ENST00000453341 SMARCC1Q92922 1105 aaPredicted RBP30.57■■■□□ 2.48
TNFRSF25-208ENST00000453341 KIF3CO14782 793 aa30.56■■■□□ 2.48
TNFRSF25-208ENST00000453341 PIGBQ92521 554 aa30.56■■■□□ 2.48
TNFRSF25-208ENST00000453341 FLT4P35916 1363 aa30.55■■■□□ 2.48
TNFRSF25-208ENST00000453341 TONSLQ96HA7 1378 aa30.55■■■□□ 2.48
TNFRSF25-208ENST00000453341 NSD3Q9BZ95 1437 aa30.54■■■□□ 2.48
TNFRSF25-208ENST00000453341 KIF20BQ96Q89 1820 aa30.53■■■□□ 2.48
TNFRSF25-208ENST00000453341 LINC00116Q8NCU8 138 aa30.53■■■□□ 2.48
TNFRSF25-208ENST00000453341 CICQ96RK0 1608 aaPredicted RBP30.53■■■□□ 2.48
TNFRSF25-208ENST00000453341 SSFA2P28290 1259 aa30.52■■■□□ 2.48
TNFRSF25-208ENST00000453341 KIF24Q5T7B8 1368 aa30.5■■■□□ 2.47
TNFRSF25-208ENST00000453341 LOC102724428A0A0B4J2F2 783 aa30.49■■■□□ 2.47
TNFRSF25-208ENST00000453341 SIK1P57059 783 aa30.49■■■□□ 2.47
TNFRSF25-208ENST00000453341 NKX1-1Q15270 411 aaPredicted RBP30.49■■■□□ 2.47
TNFRSF25-208ENST00000453341 NCAPD2Q15021 1401 aa30.48■■■□□ 2.47
TNFRSF25-208ENST00000453341 SLC24A1O60721 1099 aa30.48■■■□□ 2.47
TNFRSF25-208ENST00000453341 KIAA1551Q9HCM1 1747 aa30.47■■■□□ 2.47
TNFRSF25-208ENST00000453341 ITPK1Q13572 414 aa30.46■■■□□ 2.47
TNFRSF25-208ENST00000453341 EMILIN1Q9Y6C2 1016 aa30.46■■■□□ 2.47
TNFRSF25-208ENST00000453341 KIF13BQ9NQT8 1826 aa30.45■■■□□ 2.47
TNFRSF25-208ENST00000453341 PXDNLA1KZ92 1463 aa30.45■■■□□ 2.47
TNFRSF25-208ENST00000453341 GNPATO15228 680 aa30.44■■■□□ 2.46
TNFRSF25-208ENST00000453341 ASAP1Q9ULH1 1129 aa30.44■■■□□ 2.46
TNFRSF25-208ENST00000453341 N4BP2Q86UW6 1770 aaPredicted RBP30.43■■■□□ 2.46
TNFRSF25-208ENST00000453341 MMP10P09238 476 aa30.42■■■□□ 2.46
TNFRSF25-208ENST00000453341 APLP1P51693 650 aa30.4■■■□□ 2.46
TNFRSF25-208ENST00000453341 TMF1P82094 1093 aa30.4■■■□□ 2.46
TNFRSF25-208ENST00000453341 TMOD3Q9NYL9 352 aa30.4■■■□□ 2.46
TNFRSF25-208ENST00000453341 SPG7Q9UQ90 795 aa30.4■■■□□ 2.46
TNFRSF25-208ENST00000453341 ATP6V1AP38606 617 aa30.39■■■□□ 2.46
TNFRSF25-208ENST00000453341 ANKRD26Q9UPS8 1709 aa30.38■■■□□ 2.45
TNFRSF25-208ENST00000453341 DNAJC5GQ8N7S2 189 aa30.37■■■□□ 2.45
TNFRSF25-208ENST00000453341 CARD14Q9BXL6 1004 aa30.37■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms