RNA–Protein interactions for RNA: ENST00000453262.2

TRBV21-1-201, Transcript of T cell receptor beta variable 21-1 (pseudogene), humanhuman

BASIC

Gene TRBV21-1, Length 348 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV21-1-201ENST00000453262 MS4A4AQ96JQ5 239 aa11.42□□□□□ -0.58
TRBV21-1-201ENST00000453262 ABCA3Q99758 1704 aa11.42□□□□□ -0.58
TRBV21-1-201ENST00000453262 AHDC1Q5TGY3 1603 aaPredicted RBP11.42□□□□□ -0.58
TRBV21-1-201ENST00000453262 BRD4O60885 1362 aaPredicted RBP11.41□□□□□ -0.58
TRBV21-1-201ENST00000453262 NLRP6P59044 892 aa11.41□□□□□ -0.58
TRBV21-1-201ENST00000453262 COG3Q96JB2 828 aa11.41□□□□□ -0.58
TRBV21-1-201ENST00000453262 TNS3Q68CZ2 1445 aa11.41□□□□□ -0.58
TRBV21-1-201ENST00000453262 CRYBG1Q9Y4K1 1723 aa11.4□□□□□ -0.58
TRBV21-1-201ENST00000453262 ERBB3P21860 1342 aa11.4□□□□□ -0.58
TRBV21-1-201ENST00000453262 MYBBP1AQ9BQG0 1328 aaKnown RBP11.4□□□□□ -0.58
TRBV21-1-201ENST00000453262 RGPD5Q99666 1765 aa11.4□□□□□ -0.58
TRBV21-1-201ENST00000453262 OVOS2A0A0J9YW53 1432 aa11.4□□□□□ -0.58
TRBV21-1-201ENST00000453262 OVOS2Q6IE36 1432 aa11.4□□□□□ -0.58
TRBV21-1-201ENST00000453262 COL16A1Q07092 1604 aaPredicted RBP11.39□□□□□ -0.59
TRBV21-1-201ENST00000453262 SBNO1A3KN83 1393 aa11.39□□□□□ -0.59
TRBV21-1-201ENST00000453262 ZBTB7CA1YPR0 619 aa11.38□□□□□ -0.59
TRBV21-1-201ENST00000453262 RIMBP2O15034 1052 aa11.38□□□□□ -0.59
TRBV21-1-201ENST00000453262 SPATA31A3Q5VYP0 1347 aa11.37□□□□□ -0.59
TRBV21-1-201ENST00000453262 FBLN1P23142 703 aa11.37□□□□□ -0.59
TRBV21-1-201ENST00000453262 PPP2R1AP30153 589 aa11.37□□□□□ -0.59
TRBV21-1-201ENST00000453262 USP31Q70CQ4 1352 aa11.37□□□□□ -0.59
TRBV21-1-201ENST00000453262 MED1Q15648 1581 aaPredicted RBP11.37□□□□□ -0.59
TRBV21-1-201ENST00000453262 SOS2Q07890 1332 aaPredicted RBP11.36□□□□□ -0.59
TRBV21-1-201ENST00000453262 PEAK1Q9H792 1746 aa11.36□□□□□ -0.59
TRBV21-1-201ENST00000453262 PPM1GO15355 546 aaPredicted RBP11.36□□□□□ -0.59
TRBV21-1-201ENST00000453262 NLRP13Q86W25 1043 aa11.36□□□□□ -0.59
TRBV21-1-201ENST00000453262 MRS2Q9HD23 443 aa11.36□□□□□ -0.59
TRBV21-1-201ENST00000453262 ARHGEF10O15013 1369 aa11.36□□□□□ -0.59
TRBV21-1-201ENST00000453262 SLIT3O75094 1523 aa11.35□□□□□ -0.59
TRBV21-1-201ENST00000453262 HAP1P54257 671 aaPredicted RBP11.35□□□□□ -0.59
TRBV21-1-201ENST00000453262 CCDC184Q52MB2 194 aa11.35□□□□□ -0.59
TRBV21-1-201ENST00000453262 SHPRHQ149N8 1683 aa11.35□□□□□ -0.59
TRBV21-1-201ENST00000453262 NFAT5O94916 1531 aa11.35□□□□□ -0.59
TRBV21-1-201ENST00000453262 RGPD2P0DJD1 1756 aa11.34□□□□□ -0.59
TRBV21-1-201ENST00000453262 RRS1Q15050 365 aaKnown RBP11.34□□□□□ -0.59
TRBV21-1-201ENST00000453262 VARS2Q5ST30 1063 aaKnown RBP11.34□□□□□ -0.59
TRBV21-1-201ENST00000453262 CABLES1Q8TDN4 633 aa11.34□□□□□ -0.59
TRBV21-1-201ENST00000453262 COL22A1Q8NFW1 1626 aaPredicted RBP11.34□□□□□ -0.59
TRBV21-1-201ENST00000453262 CCER2I3L3R5 266 aa11.33□□□□□ -0.6
TRBV21-1-201ENST00000453262 MTHFSP49914 203 aa11.33□□□□□ -0.6
TRBV21-1-201ENST00000453262 EMILIN1Q9Y6C2 1016 aa11.33□□□□□ -0.6
TRBV21-1-201ENST00000453262 USP19O94966 1318 aa11.33□□□□□ -0.6
TRBV21-1-201ENST00000453262 LRRC59Q96AG4 307 aaKnown RBP11.32□□□□□ -0.6
TRBV21-1-201ENST00000453262 AATKQ6ZMQ8 1374 aa11.31□□□□□ -0.6
TRBV21-1-201ENST00000453262 GCP02774 474 aa11.31□□□□□ -0.6
TRBV21-1-201ENST00000453262 AMPHP49418 695 aa11.31□□□□□ -0.6
TRBV21-1-201ENST00000453262 ZC3H6P61129 1189 aaKnown RBP11.31□□□□□ -0.6
TRBV21-1-201ENST00000453262 KCNH5Q8NCM2 988 aa11.31□□□□□ -0.6
TRBV21-1-201ENST00000453262 CFAP53Q96M91 514 aa11.31□□□□□ -0.6
TRBV21-1-201ENST00000453262 ZSWIM6Q9HCJ5 1215 aa11.31□□□□□ -0.6
TRBV21-1-201ENST00000453262 POLKQ9UBT6 870 aa11.31□□□□□ -0.6
TRBV21-1-201ENST00000453262 MAP3K19Q56UN5 1328 aa11.31□□□□□ -0.6
TRBV21-1-201ENST00000453262 CDK12Q9NYV4 1490 aaPredicted RBP11.31□□□□□ -0.6
TRBV21-1-201ENST00000453262 PNPLA6Q8IY17 1366 aa11.3□□□□□ -0.6
TRBV21-1-201ENST00000453262 GPR153Q6NV75 609 aa11.3□□□□□ -0.6
TRBV21-1-201ENST00000453262 COL18A1P39060 1754 aa11.29□□□□□ -0.6
TRBV21-1-201ENST00000453262 SMG6Q86US8 1419 aaKnown RBP11.29□□□□□ -0.6
TRBV21-1-201ENST00000453262 FAM9BQ8IZU0 186 aa11.29□□□□□ -0.6
TRBV21-1-201ENST00000453262 BCL11BQ9C0K0 894 aaPredicted RBP11.29□□□□□ -0.6
TRBV21-1-201ENST00000453262 PLCH1Q4KWH8 1693 aa11.29□□□□□ -0.6
TRBV21-1-201ENST00000453262 COL3A1P02461 1466 aaPredicted RBP11.28□□□□□ -0.6
TRBV21-1-201ENST00000453262 NUTM2BA6NNL0 878 aaPredicted RBP11.28□□□□□ -0.6
TRBV21-1-201ENST00000453262 NUTM2EB1AL46 878 aaPredicted RBP11.28□□□□□ -0.6
TRBV21-1-201ENST00000453262 HSPA1LP34931 641 aa11.28□□□□□ -0.6
TRBV21-1-201ENST00000453262 WDR43Q15061 677 aaKnown RBP eCLIP11.28□□□□□ -0.6
TRBV21-1-201ENST00000453262 NUTM2AQ8IVF1 878 aaPredicted RBP11.28□□□□□ -0.6
TRBV21-1-201ENST00000453262 FLT4P35916 1363 aa11.28□□□□□ -0.6
TRBV21-1-201ENST00000453262 COL14A1Q05707 1796 aaKnown RBP11.27□□□□□ -0.61
TRBV21-1-201ENST00000453262 CHRNA2Q15822 529 aa11.27□□□□□ -0.61
TRBV21-1-201ENST00000453262 FBXO22Q8NEZ5 403 aa11.27□□□□□ -0.61
TRBV21-1-201ENST00000453262 LTV1Q96GA3 475 aaPredicted RBP11.27□□□□□ -0.61
TRBV21-1-201ENST00000453262 YTHDC1Q96MU7 727 aaKnown RBP11.27□□□□□ -0.61
TRBV21-1-201ENST00000453262 KIAA0232Q92628 1395 aa11.27□□□□□ -0.61
TRBV21-1-201ENST00000453262 FAM208AQ9UK61 1670 aaKnown RBP11.27□□□□□ -0.61
TRBV21-1-201ENST00000453262 U2SURPO15042 1029 aaKnown RBP11.26□□□□□ -0.61
TRBV21-1-201ENST00000453262 PRDM11Q9NQV5 511 aa11.26□□□□□ -0.61
TRBV21-1-201ENST00000453262 STK24Q9Y6E0 443 aa11.26□□□□□ -0.61
TRBV21-1-201ENST00000453262 RTL1A6NKG5 1358 aa11.26□□□□□ -0.61
TRBV21-1-201ENST00000453262 JCADQ9P266 1359 aa11.26□□□□□ -0.61
TRBV21-1-201ENST00000453262 LMO7Q8WWI1 1683 aa11.25□□□□□ -0.61
TRBV21-1-201ENST00000453262 DIAPH1O60610 1272 aaKnown RBP11.25□□□□□ -0.61
TRBV21-1-201ENST00000453262 ADAMTS2O95450 1211 aa11.25□□□□□ -0.61
TRBV21-1-201ENST00000453262 HOXC9P31274 260 aa11.25□□□□□ -0.61
TRBV21-1-201ENST00000453262 HSP90AB2PQ58FF8 381 aa11.25□□□□□ -0.61
TRBV21-1-201ENST00000453262 ARSIQ5FYB1 569 aa11.25□□□□□ -0.61
TRBV21-1-201ENST00000453262 ARHGEF25Q86VW2 580 aa11.25□□□□□ -0.61
TRBV21-1-201ENST00000453262 RGPD1P0DJD0 1748 aa11.25□□□□□ -0.61
TRBV21-1-201ENST00000453262 ZNF687Q8N1G0 1237 aa11.24□□□□□ -0.61
TRBV21-1-201ENST00000453262 PNISRQ8TF01 805 aaKnown RBP11.24□□□□□ -0.61
TRBV21-1-201ENST00000453262 IP6K1Q92551 441 aa11.24□□□□□ -0.61
TRBV21-1-201ENST00000453262 TAOK2Q9UL54 1235 aa11.24□□□□□ -0.61
TRBV21-1-201ENST00000453262 NUDCQ9Y266 331 aa11.24□□□□□ -0.61
TRBV21-1-201ENST00000453262 DLG5Q8TDM6 1919 aa11.23□□□□□ -0.61
TRBV21-1-201ENST00000453262 U2AF1L5P0DN76 240 aaPredicted RBP11.23□□□□□ -0.61
TRBV21-1-201ENST00000453262 U2AF1Q01081 240 aaKnown RBP eCLIP11.23□□□□□ -0.61
TRBV21-1-201ENST00000453262 EIF4A2Q14240 407 aaKnown RBP11.23□□□□□ -0.61
TRBV21-1-201ENST00000453262 CPDO75976 1380 aa11.23□□□□□ -0.61
TRBV21-1-201ENST00000453262 INSRP06213 1382 aa11.23□□□□□ -0.61
TRBV21-1-201ENST00000453262 KIF24Q5T7B8 1368 aa11.23□□□□□ -0.61
TRBV21-1-201ENST00000453262 ABCC6O95255 1503 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms