RNA–Protein interactions for RNA: ENST00000453260.6

TNFRSF25-207, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 2

Gene TNFRSF25, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-207ENST00000453260 INSRP06213 1382 aa25.49■■□□□ 1.67
TNFRSF25-207ENST00000453260 FLT4P35916 1363 aa25.49■■□□□ 1.67
TNFRSF25-207ENST00000453260 PRIM1P49642 420 aaKnown RBP25.49■■□□□ 1.67
TNFRSF25-207ENST00000453260 HSP90AB2PQ58FF8 381 aa25.48■■□□□ 1.67
TNFRSF25-207ENST00000453260 MTFR1LQ9H019 292 aa25.48■■□□□ 1.67
TNFRSF25-207ENST00000453260 NSD3Q9BZ95 1437 aa25.47■■□□□ 1.67
TNFRSF25-207ENST00000453260 TATP17735 454 aaPredicted RBP25.47■■□□□ 1.67
TNFRSF25-207ENST00000453260 USHBP1Q8N6Y0 703 aa25.46■■□□□ 1.67
TNFRSF25-207ENST00000453260 PTGER2P43116 358 aa25.45■■□□□ 1.66
TNFRSF25-207ENST00000453260 LRRC4BQ9NT99 713 aa25.45■■□□□ 1.66
TNFRSF25-207ENST00000453260 MEGF6O75095 1541 aa25.45■■□□□ 1.66
TNFRSF25-207ENST00000453260 MYOM1P52179 1685 aa25.45■■□□□ 1.66
TNFRSF25-207ENST00000453260 POLR3GLQ9BT43 218 aa25.44■■□□□ 1.66
TNFRSF25-207ENST00000453260 PPM1GO15355 546 aaPredicted RBP25.42■■□□□ 1.66
TNFRSF25-207ENST00000453260 EIF4G2P78344 907 aaKnown RBP eCLIP25.42■■□□□ 1.66
TNFRSF25-207ENST00000453260 CCER1Q8TC90 406 aaPredicted RBP25.42■■□□□ 1.66
TNFRSF25-207ENST00000453260 EMILIN1Q9Y6C2 1016 aa25.41■■□□□ 1.66
TNFRSF25-207ENST00000453260 PAPPAQ13219 1627 aa25.41■■□□□ 1.66
TNFRSF25-207ENST00000453260 DOT1LQ8TEK3 1739 aa25.4■■□□□ 1.66
TNFRSF25-207ENST00000453260 SHANK3Q9BYB0 1731 aa25.4■■□□□ 1.66
TNFRSF25-207ENST00000453260 ZNF827Q17R98 1081 aa25.4■■□□□ 1.66
TNFRSF25-207ENST00000453260 PCDH11XQ9BZA7 1347 aa25.39■■□□□ 1.66
TNFRSF25-207ENST00000453260 PCDH11YQ9BZA8 1340 aa25.39■■□□□ 1.66
TNFRSF25-207ENST00000453260 HMGB2P26583 209 aaKnown RBP25.39■■□□□ 1.66
TNFRSF25-207ENST00000453260 AKT1S1Q96B36 256 aa25.39■■□□□ 1.66
TNFRSF25-207ENST00000453260 YY1P25490 414 aa25.38■■□□□ 1.65
TNFRSF25-207ENST00000453260 SLC16A10Q8TF71 515 aa25.38■■□□□ 1.65
TNFRSF25-207ENST00000453260 TFCP2L1Q9NZI6 479 aa25.38■■□□□ 1.65
TNFRSF25-207ENST00000453260 MAP2P11137 1827 aaKnown RBP25.37■■□□□ 1.65
TNFRSF25-207ENST00000453260 ARXQ96QS3 562 aa25.36■■□□□ 1.65
TNFRSF25-207ENST00000453260 SGIP1Q9BQI5 828 aa25.36■■□□□ 1.65
TNFRSF25-207ENST00000453260 CCNL1Q9UK58 526 aaPredicted RBP25.36■■□□□ 1.65
TNFRSF25-207ENST00000453260 WASHC2AQ641Q2 1341 aa25.36■■□□□ 1.65
TNFRSF25-207ENST00000453260 NSD2O96028 1365 aa25.35■■□□□ 1.65
TNFRSF25-207ENST00000453260 SYT17Q9BSW7 474 aa25.35■■□□□ 1.65
TNFRSF25-207ENST00000453260 FHDC1Q9C0D6 1143 aaPredicted RBP25.35■■□□□ 1.65
TNFRSF25-207ENST00000453260 KCNQ4P56696 695 aa25.34■■□□□ 1.65
TNFRSF25-207ENST00000453260 LY75O60449 1722 aa25.34■■□□□ 1.65
TNFRSF25-207ENST00000453260 HSPA5P11021 654 aaKnown RBP25.33■■□□□ 1.65
TNFRSF25-207ENST00000453260 QSER1Q2KHR3 1735 aa25.32■■□□□ 1.64
TNFRSF25-207ENST00000453260 POLKQ9UBT6 870 aa25.32■■□□□ 1.64
TNFRSF25-207ENST00000453260 SPG7Q9UQ90 795 aa25.32■■□□□ 1.64
TNFRSF25-207ENST00000453260 POLD1P28340 1107 aa25.31■■□□□ 1.64
TNFRSF25-207ENST00000453260 CYP27B1O15528 508 aa25.3■■□□□ 1.64
TNFRSF25-207ENST00000453260 MPRIPQ6WCQ1 1025 aa25.3■■□□□ 1.64
TNFRSF25-207ENST00000453260 PNPLA7Q6ZV29 1317 aa25.3■■□□□ 1.64
TNFRSF25-207ENST00000453260 EYA1Q99502 592 aa25.29■■□□□ 1.64
TNFRSF25-207ENST00000453260 ANKRD26Q9UPS8 1709 aa25.29■■□□□ 1.64
TNFRSF25-207ENST00000453260 TNNT2P45379 298 aaPredicted RBP25.28■■□□□ 1.64
TNFRSF25-207ENST00000453260 PANK3Q9H999 370 aa25.28■■□□□ 1.64
TNFRSF25-207ENST00000453260 SMARCC1Q92922 1105 aaPredicted RBP25.27■■□□□ 1.64
TNFRSF25-207ENST00000453260 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.27■■□□□ 1.64
TNFRSF25-207ENST00000453260 MSH5O43196 834 aa25.26■■□□□ 1.63
TNFRSF25-207ENST00000453260 NCAPD2Q15021 1401 aa25.26■■□□□ 1.63
TNFRSF25-207ENST00000453260 NKX1-1Q15270 411 aaPredicted RBP25.25■■□□□ 1.63
TNFRSF25-207ENST00000453260 MAP3K5Q99683 1374 aa25.25■■□□□ 1.63
TNFRSF25-207ENST00000453260 PKD1L3Q7Z443 1732 aa25.24■■□□□ 1.63
TNFRSF25-207ENST00000453260 PALLDQ8WX93 1383 aa25.23■■□□□ 1.63
TNFRSF25-207ENST00000453260 ITGB4P16144 1822 aa25.22■■□□□ 1.63
TNFRSF25-207ENST00000453260 TUBGCP6Q96RT7 1819 aa25.22■■□□□ 1.63
TNFRSF25-207ENST00000453260 EIF4A2Q14240 407 aaKnown RBP25.22■■□□□ 1.63
TNFRSF25-207ENST00000453260 FLAD1Q8NFF5 587 aa25.22■■□□□ 1.63
TNFRSF25-207ENST00000453260 IFNL2Q8IZJ0 200 aa25.21■■□□□ 1.63
TNFRSF25-207ENST00000453260 KLHL34Q8N239 644 aa25.21■■□□□ 1.63
TNFRSF25-207ENST00000453260 COL23A1Q86Y22 540 aaPredicted RBP25.2■■□□□ 1.62
TNFRSF25-207ENST00000453260 PIGBQ92521 554 aa25.2■■□□□ 1.62
TNFRSF25-207ENST00000453260 UTRNP46939 3433 aa25.2■■□□□ 1.62
TNFRSF25-207ENST00000453260 MORC1Q86VD1 984 aa25.19■■□□□ 1.62
TNFRSF25-207ENST00000453260 KNSTRNQ9Y448 316 aa25.19■■□□□ 1.62
TNFRSF25-207ENST00000453260 C5P01031 1676 aa25.18■■□□□ 1.62
TNFRSF25-207ENST00000453260 TMOD3Q9NYL9 352 aa25.18■■□□□ 1.62
TNFRSF25-207ENST00000453260 COL24A1Q17RW2 1714 aa25.17■■□□□ 1.62
TNFRSF25-207ENST00000453260 PLEKHG2Q9H7P9 1386 aa25.17■■□□□ 1.62
TNFRSF25-207ENST00000453260 PHKG2P15735 406 aa25.16■■□□□ 1.62
TNFRSF25-207ENST00000453260 GPR162Q16538 588 aa25.16■■□□□ 1.62
TNFRSF25-207ENST00000453260 TOGARAM1Q9Y4F4 1720 aa25.16■■□□□ 1.62
TNFRSF25-207ENST00000453260 TAF1LQ8IZX4 1826 aa25.15■■□□□ 1.62
TNFRSF25-207ENST00000453260 AK7Q96M32 723 aa25.15■■□□□ 1.62
TNFRSF25-207ENST00000453260 CHD4Q14839 1912 aa25.14■■□□□ 1.62
TNFRSF25-207ENST00000453260 IGSF1Q8N6C5 1336 aa25.13■■□□□ 1.61
TNFRSF25-207ENST00000453260 LOC102724428A0A0B4J2F2 783 aa25.12■■□□□ 1.61
TNFRSF25-207ENST00000453260 HSP90AB1P08238 724 aaKnown RBP25.12■■□□□ 1.61
TNFRSF25-207ENST00000453260 SIK1P57059 783 aa25.12■■□□□ 1.61
TNFRSF25-207ENST00000453260 PLEKHO1Q53GL0 409 aaPredicted RBP25.12■■□□□ 1.61
TNFRSF25-207ENST00000453260 AMOTQ4VCS5 1084 aa25.1■■□□□ 1.61
TNFRSF25-207ENST00000453260 MSL1Q68DK7 614 aa25.1■■□□□ 1.61
TNFRSF25-207ENST00000453260 C4BP0C0L5 1744 aa25.09■■□□□ 1.61
TNFRSF25-207ENST00000453260 PELP1Q8IZL8 1130 aaKnown RBP25.09■■□□□ 1.61
TNFRSF25-207ENST00000453260 ASAP1Q9ULH1 1129 aa25.09■■□□□ 1.61
TNFRSF25-207ENST00000453260 ERVV-2B6SEH9 535 aa25.08■■□□□ 1.61
TNFRSF25-207ENST00000453260 ATP6V1AP38606 617 aa25.08■■□□□ 1.61
TNFRSF25-207ENST00000453260 DCAF5Q96JK2 942 aa25.08■■□□□ 1.61
TNFRSF25-207ENST00000453260 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.05■■□□□ 1.6
TNFRSF25-207ENST00000453260 PHF14O94880 888 aa25.05■■□□□ 1.6
TNFRSF25-207ENST00000453260 SSFA2P28290 1259 aa25.05■■□□□ 1.6
TNFRSF25-207ENST00000453260 ZNF530Q6P9A1 599 aaPredicted RBP25.05■■□□□ 1.6
TNFRSF25-207ENST00000453260 ZNF784Q8NCA9 323 aaPredicted RBP25.05■■□□□ 1.6
TNFRSF25-207ENST00000453260 NLGN2Q8NFZ4 835 aa25.05■■□□□ 1.6
TNFRSF25-207ENST00000453260 ATG3Q9NT62 314 aa25.05■■□□□ 1.6
TNFRSF25-207ENST00000453260 C1orf141Q5JVX7 400 aa25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms