RNA–Protein interactions for RNA: ENST00000452260.6

SATB1-208, Transcript of SATB homeobox 1, humanhuman

TSL 4

Gene SATB1, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-208ENST00000452260 AMPHP49418 695 aa13.88□□□□□ -0.19
SATB1-208ENST00000452260 SLC24A1O60721 1099 aa13.87□□□□□ -0.19
SATB1-208ENST00000452260 GIGYF1O75420 1035 aaPredicted RBP13.87□□□□□ -0.19
SATB1-208ENST00000452260 ZCRB1Q8TBF4 217 aaKnown RBP13.87□□□□□ -0.19
SATB1-208ENST00000452260 GRIN3BO60391 1043 aa13.86□□□□□ -0.19
SATB1-208ENST00000452260 HMGB2P26583 209 aaKnown RBP13.86□□□□□ -0.19
SATB1-208ENST00000452260 HOXC9P31274 260 aa13.86□□□□□ -0.19
SATB1-208ENST00000452260 CCNL1Q9UK58 526 aaPredicted RBP13.86□□□□□ -0.19
SATB1-208ENST00000452260 MAP3K19Q56UN5 1328 aa13.86□□□□□ -0.19
SATB1-208ENST00000452260 UTRNP46939 3433 aa13.85□□□□□ -0.19
SATB1-208ENST00000452260 KCNQ4P56696 695 aa13.85□□□□□ -0.19
SATB1-208ENST00000452260 USP47Q96K76 1375 aa13.84□□□□□ -0.19
SATB1-208ENST00000452260 FAM208AQ9UK61 1670 aaKnown RBP13.84□□□□□ -0.19
SATB1-208ENST00000452260 CGNL1Q0VF96 1302 aa13.84□□□□□ -0.19
SATB1-208ENST00000452260 TONSLQ96HA7 1378 aa13.83□□□□□ -0.19
SATB1-208ENST00000452260 NLGN2Q8NFZ4 835 aa13.83□□□□□ -0.2
SATB1-208ENST00000452260 QSER1Q2KHR3 1735 aa13.83□□□□□ -0.2
SATB1-208ENST00000452260 RAPGEF4Q8WZA2 1011 aa13.82□□□□□ -0.2
SATB1-208ENST00000452260 NSD2O96028 1365 aa13.82□□□□□ -0.2
SATB1-208ENST00000452260 FBLN1P23142 703 aa13.81□□□□□ -0.2
SATB1-208ENST00000452260 COL23A1Q86Y22 540 aaPredicted RBP13.81□□□□□ -0.2
SATB1-208ENST00000452260 FLAD1Q8NFF5 587 aa13.81□□□□□ -0.2
SATB1-208ENST00000452260 RTL1A6NKG5 1358 aa13.81□□□□□ -0.2
SATB1-208ENST00000452260 ST20-MTHFSA0A0A6YYL1 179 aa13.8□□□□□ -0.2
SATB1-208ENST00000452260 TATP17735 454 aaPredicted RBP13.8□□□□□ -0.2
SATB1-208ENST00000452260 SMG6Q86US8 1419 aaKnown RBP13.8□□□□□ -0.2
SATB1-208ENST00000452260 MEGF6O75095 1541 aa13.8□□□□□ -0.2
SATB1-208ENST00000452260 COL24A1Q17RW2 1714 aa13.79□□□□□ -0.2
SATB1-208ENST00000452260 YBX3P16989 372 aaKnown RBP eCLIP13.79□□□□□ -0.2
SATB1-208ENST00000452260 RRS1Q15050 365 aaKnown RBP13.79□□□□□ -0.2
SATB1-208ENST00000452260 NBPF6Q5VWK0 638 aa13.79□□□□□ -0.2
SATB1-208ENST00000452260 NBPF4Q96M43 638 aa13.79□□□□□ -0.2
SATB1-208ENST00000452260 TESK2Q96S53 571 aa13.79□□□□□ -0.2
SATB1-208ENST00000452260 DOT1LQ8TEK3 1739 aa13.78□□□□□ -0.2
SATB1-208ENST00000452260 MSL1Q68DK7 614 aa13.78□□□□□ -0.2
SATB1-208ENST00000452260 CD2APQ9Y5K6 639 aa13.78□□□□□ -0.2
SATB1-208ENST00000452260 LY75O60449 1722 aa13.78□□□□□ -0.2
SATB1-208ENST00000452260 FYB1O15117 783 aa13.77□□□□□ -0.21
SATB1-208ENST00000452260 USHBP1Q8N6Y0 703 aa13.77□□□□□ -0.21
SATB1-208ENST00000452260 PCDH11XQ9BZA7 1347 aa13.77□□□□□ -0.21
SATB1-208ENST00000452260 PCDH11YQ9BZA8 1340 aa13.77□□□□□ -0.21
SATB1-208ENST00000452260 GGNBP2Q9H3C7 697 aa13.77□□□□□ -0.21
SATB1-208ENST00000452260 PPP4R3CPQ6ZMV5 832 aa13.76□□□□□ -0.21
SATB1-208ENST00000452260 SMARCC1Q92922 1105 aaPredicted RBP13.76□□□□□ -0.21
SATB1-208ENST00000452260 TUBGCP6Q96RT7 1819 aa13.76□□□□□ -0.21
SATB1-208ENST00000452260 PALLDQ8WX93 1383 aa13.75□□□□□ -0.21
SATB1-208ENST00000452260 TMF1P82094 1093 aa13.75□□□□□ -0.21
SATB1-208ENST00000452260 MPRIPQ6WCQ1 1025 aa13.75□□□□□ -0.21
SATB1-208ENST00000452260 AK7Q96M32 723 aa13.75□□□□□ -0.21
SATB1-208ENST00000452260 INSRP06213 1382 aa13.74□□□□□ -0.21
SATB1-208ENST00000452260 GPBP1L1Q9HC44 474 aaPredicted RBP13.74□□□□□ -0.21
SATB1-208ENST00000452260 SHANK3Q9BYB0 1731 aa13.73□□□□□ -0.21
SATB1-208ENST00000452260 KIF24Q5T7B8 1368 aa13.73□□□□□ -0.21
SATB1-208ENST00000452260 HSP90AB2PQ58FF8 381 aa13.73□□□□□ -0.21
SATB1-208ENST00000452260 ATP10DQ9P241 1426 aa13.73□□□□□ -0.21
SATB1-208ENST00000452260 FLT4P35916 1363 aa13.72□□□□□ -0.21
SATB1-208ENST00000452260 CDCA8Q53HL2 280 aa13.72□□□□□ -0.21
SATB1-208ENST00000452260 IFFO2Q5TF58 517 aa13.72□□□□□ -0.21
SATB1-208ENST00000452260 RGPD2P0DJD1 1756 aa13.72□□□□□ -0.21
SATB1-208ENST00000452260 NSD3Q9BZ95 1437 aa13.72□□□□□ -0.21
SATB1-208ENST00000452260 CYP27B1O15528 508 aa13.71□□□□□ -0.21
SATB1-208ENST00000452260 PHF14O94880 888 aa13.7□□□□□ -0.22
SATB1-208ENST00000452260 SPG7Q9UQ90 795 aa13.7□□□□□ -0.22
SATB1-208ENST00000452260 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.69□□□□□ -0.22
SATB1-208ENST00000452260 SSFA2P28290 1259 aa13.69□□□□□ -0.22
SATB1-208ENST00000452260 PIGBQ92521 554 aa13.69□□□□□ -0.22
SATB1-208ENST00000452260 C5P01031 1676 aa13.69□□□□□ -0.22
SATB1-208ENST00000452260 NKX1-1Q15270 411 aaPredicted RBP13.68□□□□□ -0.22
SATB1-208ENST00000452260 IGSF1Q8N6C5 1336 aa13.67□□□□□ -0.22
SATB1-208ENST00000452260 LOC102724428A0A0B4J2F2 783 aa13.67□□□□□ -0.22
SATB1-208ENST00000452260 HSPA6P17066 643 aa13.67□□□□□ -0.22
SATB1-208ENST00000452260 SIK1P57059 783 aa13.67□□□□□ -0.22
SATB1-208ENST00000452260 ZNF526Q8TF50 670 aaPredicted RBP13.67□□□□□ -0.22
SATB1-208ENST00000452260 ADCY9O60503 1353 aa13.67□□□□□ -0.22
SATB1-208ENST00000452260 PPM1GO15355 546 aaPredicted RBP13.66□□□□□ -0.22
SATB1-208ENST00000452260 TMOD3Q9NYL9 352 aa13.66□□□□□ -0.22
SATB1-208ENST00000452260 EMILIN1Q9Y6C2 1016 aa13.66□□□□□ -0.22
SATB1-208ENST00000452260 C4BP0C0L5 1744 aa13.66□□□□□ -0.22
SATB1-208ENST00000452260 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.65□□□□□ -0.22
SATB1-208ENST00000452260 GNPATO15228 680 aa13.64□□□□□ -0.23
SATB1-208ENST00000452260 ATP6V1AP38606 617 aa13.64□□□□□ -0.23
SATB1-208ENST00000452260 SMIM5Q71RC9 77 aa13.64□□□□□ -0.23
SATB1-208ENST00000452260 AMIGO3Q86WK7 504 aa13.64□□□□□ -0.23
SATB1-208ENST00000452260 IFNL2Q8IZJ0 200 aa13.64□□□□□ -0.23
SATB1-208ENST00000452260 LINC00116Q8NCU8 138 aa13.64□□□□□ -0.23
SATB1-208ENST00000452260 WWC3Q9ULE0 1092 aa13.64□□□□□ -0.23
SATB1-208ENST00000452260 TAF1LQ8IZX4 1826 aa13.64□□□□□ -0.23
SATB1-208ENST00000452260 WASHC2AQ641Q2 1341 aa13.64□□□□□ -0.23
SATB1-208ENST00000452260 GOLGB1Q14789 3259 aaKnown RBP13.63□□□□□ -0.23
SATB1-208ENST00000452260 EYA1Q99502 592 aa13.63□□□□□ -0.23
SATB1-208ENST00000452260 CARD14Q9BXL6 1004 aa13.63□□□□□ -0.23
SATB1-208ENST00000452260 NCAPD2Q15021 1401 aa13.63□□□□□ -0.23
SATB1-208ENST00000452260 ASAP1Q9ULH1 1129 aa13.62□□□□□ -0.23
SATB1-208ENST00000452260 MMP10P09238 476 aa13.61□□□□□ -0.23
SATB1-208ENST00000452260 PHKG2P15735 406 aa13.61□□□□□ -0.23
SATB1-208ENST00000452260 TGFB2P61812 414 aa13.61□□□□□ -0.23
SATB1-208ENST00000452260 ITPK1Q13572 414 aa13.61□□□□□ -0.23
SATB1-208ENST00000452260 RTCBQ9Y3I0 505 aaKnown RBP13.61□□□□□ -0.23
SATB1-208ENST00000452260 ITGB4P16144 1822 aa13.61□□□□□ -0.23
SATB1-208ENST00000452260 KIF20BQ96Q89 1820 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms