RNA–Protein interactions for RNA: ENST00000449911.2

SSU72P1-201, Transcript of SSU72 pseudogene 1, humanhuman

BASIC

Gene SSU72P1, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72P1-201ENST00000449911 ZEB1P37275 1124 aaPredicted RBP13.08□□□□□ -0.32
SSU72P1-201ENST00000449911 ANKRD24Q8TF21 1146 aa13.08□□□□□ -0.32
SSU72P1-201ENST00000449911 UPF1Q92900 1129 aaKnown RBP eCLIP13.08□□□□□ -0.32
SSU72P1-201ENST00000449911 CDCA7Q9BWT1 371 aaPredicted RBP13.08□□□□□ -0.32
SSU72P1-201ENST00000449911 CARD10Q9BWT7 1032 aa13.08□□□□□ -0.32
SSU72P1-201ENST00000449911 KIF24Q5T7B8 1368 aa13.07□□□□□ -0.32
SSU72P1-201ENST00000449911 HOXC9P31274 260 aa13.07□□□□□ -0.32
SSU72P1-201ENST00000449911 PDE3BQ13370 1112 aa13.07□□□□□ -0.32
SSU72P1-201ENST00000449911 RRS1Q15050 365 aaKnown RBP13.07□□□□□ -0.32
SSU72P1-201ENST00000449911 NLRP2Q9NX02 1062 aa13.07□□□□□ -0.32
SSU72P1-201ENST00000449911 RGPD5Q99666 1765 aa13.07□□□□□ -0.32
SSU72P1-201ENST00000449911 FLT4P35916 1363 aa13.07□□□□□ -0.32
SSU72P1-201ENST00000449911 EP400Q96L91 3159 aa13.06□□□□□ -0.32
SSU72P1-201ENST00000449911 FAM208AQ9UK61 1670 aaKnown RBP13.06□□□□□ -0.32
SSU72P1-201ENST00000449911 ANKRD26Q9UPS8 1709 aa13.06□□□□□ -0.32
SSU72P1-201ENST00000449911 TSPYL2Q9H2G4 693 aaPredicted RBP13.06□□□□□ -0.32
SSU72P1-201ENST00000449911 WASHC2AQ641Q2 1341 aa13.06□□□□□ -0.32
SSU72P1-201ENST00000449911 BRWD3Q6RI45 1802 aa13.06□□□□□ -0.32
SSU72P1-201ENST00000449911 SF3B2Q13435 895 aaKnown RBP13.05□□□□□ -0.32
SSU72P1-201ENST00000449911 CCDC125Q86Z20 511 aa13.05□□□□□ -0.32
SSU72P1-201ENST00000449911 LTV1Q96GA3 475 aaPredicted RBP13.05□□□□□ -0.32
SSU72P1-201ENST00000449911 PPM1GO15355 546 aaPredicted RBP13.04□□□□□ -0.32
SSU72P1-201ENST00000449911 FBLN1P23142 703 aa13.04□□□□□ -0.32
SSU72P1-201ENST00000449911 DDB1Q16531 1140 aa13.04□□□□□ -0.32
SSU72P1-201ENST00000449911 MORC1Q86VD1 984 aa13.04□□□□□ -0.32
SSU72P1-201ENST00000449911 PARP4Q9UKK3 1724 aaKnown RBP13.04□□□□□ -0.32
SSU72P1-201ENST00000449911 TNNT2P45379 298 aaPredicted RBP13.03□□□□□ -0.32
SSU72P1-201ENST00000449911 WNK3Q9BYP7 1800 aa13.03□□□□□ -0.32
SSU72P1-201ENST00000449911 INSRP06213 1382 aa13.03□□□□□ -0.32
SSU72P1-201ENST00000449911 FAM196AQ6ZSG2 479 aa13.02□□□□□ -0.33
SSU72P1-201ENST00000449911 PLCD3Q8N3E9 789 aa13.02□□□□□ -0.33
SSU72P1-201ENST00000449911 LRRC37A3O60309 1634 aa13.02□□□□□ -0.33
SSU72P1-201ENST00000449911 IL2RBP14784 551 aa13.01□□□□□ -0.33
SSU72P1-201ENST00000449911 MS4A3Q96HJ5 214 aa13.01□□□□□ -0.33
SSU72P1-201ENST00000449911 EMILIN1Q9Y6C2 1016 aa13.01□□□□□ -0.33
SSU72P1-201ENST00000449911 OVOS2A0A0G2JMS6 1433 aa13□□□□□ -0.33
SSU72P1-201ENST00000449911 DISP2A7MBM2 1401 aa13□□□□□ -0.33
SSU72P1-201ENST00000449911 TNS2Q63HR2 1409 aa13□□□□□ -0.33
SSU72P1-201ENST00000449911 EXOC5O00471 708 aa13□□□□□ -0.33
SSU72P1-201ENST00000449911 HSP90AB2PQ58FF8 381 aa13□□□□□ -0.33
SSU72P1-201ENST00000449911 PEAK1Q9H792 1746 aa12.99□□□□□ -0.33
SSU72P1-201ENST00000449911 AMER1Q5JTC6 1135 aaPredicted RBP12.99□□□□□ -0.33
SSU72P1-201ENST00000449911 FAM182BQ5T319 152 aa12.99□□□□□ -0.33
SSU72P1-201ENST00000449911 CC2D1BQ5T0F9 858 aaKnown RBP12.98□□□□□ -0.33
SSU72P1-201ENST00000449911 RASEFQ8IZ41 740 aa12.98□□□□□ -0.33
SSU72P1-201ENST00000449911 POLKQ9UBT6 870 aa12.98□□□□□ -0.33
SSU72P1-201ENST00000449911 RGPD1P0DJD0 1748 aa12.98□□□□□ -0.33
SSU72P1-201ENST00000449911 NPC1L1Q9UHC9 1359 aa12.97□□□□□ -0.33
SSU72P1-201ENST00000449911 BAG6P46379 1132 aa12.97□□□□□ -0.33
SSU72P1-201ENST00000449911 RAPGEF4Q8WZA2 1011 aa12.97□□□□□ -0.33
SSU72P1-201ENST00000449911 PER1O15534 1290 aaPredicted RBP12.96□□□□□ -0.33
SSU72P1-201ENST00000449911 ZBTB47Q9UFB7 747 aaPredicted RBP12.96□□□□□ -0.33
SSU72P1-201ENST00000449911 MAP2P11137 1827 aaKnown RBP12.96□□□□□ -0.33
SSU72P1-201ENST00000449911 TRIM37O94972 964 aa12.95□□□□□ -0.34
SSU72P1-201ENST00000449911 CNGB1Q14028 1251 aaPredicted RBP12.95□□□□□ -0.34
SSU72P1-201ENST00000449911 NBPF6Q5VWK0 638 aa12.95□□□□□ -0.34
SSU72P1-201ENST00000449911 NBPF4Q96M43 638 aa12.95□□□□□ -0.34
SSU72P1-201ENST00000449911 TATP17735 454 aaPredicted RBP12.94□□□□□ -0.34
SSU72P1-201ENST00000449911 USHBP1Q8N6Y0 703 aa12.94□□□□□ -0.34
SSU72P1-201ENST00000449911 KIF12Q96FN5 646 aa12.94□□□□□ -0.34
SSU72P1-201ENST00000449911 ASTLQ6HA08 431 aaPredicted RBP12.93□□□□□ -0.34
SSU72P1-201ENST00000449911 MARCH10Q8NA82 808 aaPredicted RBP12.93□□□□□ -0.34
SSU72P1-201ENST00000449911 BCL9O00512 1426 aa12.93□□□□□ -0.34
SSU72P1-201ENST00000449911 MEGF6O75095 1541 aa12.93□□□□□ -0.34
SSU72P1-201ENST00000449911 RGPD2P0DJD1 1756 aa12.92□□□□□ -0.34
SSU72P1-201ENST00000449911 EIF4A2Q14240 407 aaKnown RBP12.92□□□□□ -0.34
SSU72P1-201ENST00000449911 PELP1Q8IZL8 1130 aaKnown RBP12.92□□□□□ -0.34
SSU72P1-201ENST00000449911 ZCRB1Q8TBF4 217 aaKnown RBP12.92□□□□□ -0.34
SSU72P1-201ENST00000449911 TNS1Q9HBL0 1735 aaKnown RBP12.92□□□□□ -0.34
SSU72P1-201ENST00000449911 APBA3O96018 575 aa12.91□□□□□ -0.34
SSU72P1-201ENST00000449911 DEFB132Q7Z7B7 95 aa12.91□□□□□ -0.34
SSU72P1-201ENST00000449911 DDX54Q8TDD1 881 aaKnown RBP12.91□□□□□ -0.34
SSU72P1-201ENST00000449911 PARD3Q8TEW0 1356 aa12.91□□□□□ -0.34
SSU72P1-201ENST00000449911 PCDH11XQ9BZA7 1347 aa12.9□□□□□ -0.34
SSU72P1-201ENST00000449911 PCDH11YQ9BZA8 1340 aa12.9□□□□□ -0.34
SSU72P1-201ENST00000449911 NCAPD2Q15021 1401 aa12.9□□□□□ -0.34
SSU72P1-201ENST00000449911 MTHFSP49914 203 aa12.9□□□□□ -0.34
SSU72P1-201ENST00000449911 EYA1Q99502 592 aa12.9□□□□□ -0.34
SSU72P1-201ENST00000449911 ATMINO43313 823 aaPredicted RBP12.89□□□□□ -0.35
SSU72P1-201ENST00000449911 BCL11BQ9C0K0 894 aaPredicted RBP12.89□□□□□ -0.35
SSU72P1-201ENST00000449911 SPG7Q9UQ90 795 aa12.89□□□□□ -0.35
SSU72P1-201ENST00000449911 PLEKHG2Q9H7P9 1386 aa12.89□□□□□ -0.35
SSU72P1-201ENST00000449911 IGSF1Q8N6C5 1336 aa12.88□□□□□ -0.35
SSU72P1-201ENST00000449911 NUBP1P53384 320 aa12.88□□□□□ -0.35
SSU72P1-201ENST00000449911 EN1Q05925 392 aaPredicted RBP12.88□□□□□ -0.35
SSU72P1-201ENST00000449911 CFAP53Q96M91 514 aa12.88□□□□□ -0.35
SSU72P1-201ENST00000449911 FBXO3Q9UK99 471 aa12.88□□□□□ -0.35
SSU72P1-201ENST00000449911 NHSQ6T4R5 1651 aa12.87□□□□□ -0.35
SSU72P1-201ENST00000449911 DIAPH1O60610 1272 aaKnown RBP12.87□□□□□ -0.35
SSU72P1-201ENST00000449911 MAP3K13O43283 966 aa12.86□□□□□ -0.35
SSU72P1-201ENST00000449911 ACSBG1Q96GR2 724 aa12.86□□□□□ -0.35
SSU72P1-201ENST00000449911 SBF2Q86WG5 1849 aa12.85□□□□□ -0.35
SSU72P1-201ENST00000449911 PKD1L3Q7Z443 1732 aa12.85□□□□□ -0.35
SSU72P1-201ENST00000449911 IL13P35225 146 aa12.85□□□□□ -0.35
SSU72P1-201ENST00000449911 DDX10Q13206 875 aaKnown RBP12.85□□□□□ -0.35
SSU72P1-201ENST00000449911 SYTL4Q96C24 671 aaPredicted RBP12.85□□□□□ -0.35
SSU72P1-201ENST00000449911 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.85□□□□□ -0.35
SSU72P1-201ENST00000449911 SHANK3Q9BYB0 1731 aa12.85□□□□□ -0.35
SSU72P1-201ENST00000449911 RGPD3A6NKT7 1758 aaPredicted RBP12.84□□□□□ -0.35
SSU72P1-201ENST00000449911 RGPD4Q7Z3J3 1758 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms