RNA–Protein interactions for RNA: ENST00000449600.1

NPHP1-208, Transcript of nephrocystin 1, humanhuman

TSL 3

Gene NPHP1, Length 486 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-208ENST00000449600 SOWAHBA6NEL2 793 aa11.69□□□□□ -0.54
NPHP1-208ENST00000449600 NEUROD1Q13562 356 aa11.68□□□□□ -0.54
NPHP1-208ENST00000449600 VPS72Q15906 364 aa11.68□□□□□ -0.54
NPHP1-208ENST00000449600 TIMELESSQ9UNS1 1208 aa11.68□□□□□ -0.54
NPHP1-208ENST00000449600 ORAI2Q96SN7 254 aa11.67□□□□□ -0.54
NPHP1-208ENST00000449600 MYO5BQ9ULV0 1848 aa11.67□□□□□ -0.54
NPHP1-208ENST00000449600 ZFRQ96KR1 1074 aaKnown RBP11.66□□□□□ -0.54
NPHP1-208ENST00000449600 KIAA1468Q9P260 1216 aa11.66□□□□□ -0.54
NPHP1-208ENST00000449600 RGPD1P0DJD0 1748 aa11.66□□□□□ -0.54
NPHP1-208ENST00000449600 NALCNQ8IZF0 1738 aa11.66□□□□□ -0.54
NPHP1-208ENST00000449600 PARD3Q8TEW0 1356 aa11.66□□□□□ -0.54
NPHP1-208ENST00000449600 PXDNQ92626 1479 aa11.65□□□□□ -0.54
NPHP1-208ENST00000449600 CAMKK2Q96RR4 588 aa11.65□□□□□ -0.54
NPHP1-208ENST00000449600 NPHP3Q7Z494 1330 aa11.64□□□□□ -0.55
NPHP1-208ENST00000449600 CAMK2BQ13554 666 aa11.64□□□□□ -0.55
NPHP1-208ENST00000449600 SPON1Q9HCB6 807 aa11.64□□□□□ -0.55
NPHP1-208ENST00000449600 TONSLQ96HA7 1378 aa11.64□□□□□ -0.55
NPHP1-208ENST00000449600 EZH2Q15910 746 aaKnown RBP11.63□□□□□ -0.55
NPHP1-208ENST00000449600 C6orf132Q5T0Z8 1188 aa11.63□□□□□ -0.55
NPHP1-208ENST00000449600 NYAP1Q6ZVC0 841 aa11.63□□□□□ -0.55
NPHP1-208ENST00000449600 WBP1LQ9NX94 342 aa11.63□□□□□ -0.55
NPHP1-208ENST00000449600 PPP1R1BQ9UD71 204 aaPredicted RBP11.63□□□□□ -0.55
NPHP1-208ENST00000449600 NRXN3Q9Y4C0 1643 aa11.63□□□□□ -0.55
NPHP1-208ENST00000449600 SIN3AQ96ST3 1273 aa11.62□□□□□ -0.55
NPHP1-208ENST00000449600 METP08581 1390 aa11.62□□□□□ -0.55
NPHP1-208ENST00000449600 TNS1Q9HBL0 1735 aaKnown RBP11.61□□□□□ -0.55
NPHP1-208ENST00000449600 KCNQ2O43526 872 aa11.61□□□□□ -0.55
NPHP1-208ENST00000449600 EPAS1Q99814 870 aa11.61□□□□□ -0.55
NPHP1-208ENST00000449600 SEPT9Q9UHD8 586 aaPredicted RBP11.61□□□□□ -0.55
NPHP1-208ENST00000449600 CAMTA1Q9Y6Y1 1673 aa11.61□□□□□ -0.55
NPHP1-208ENST00000449600 TRIM6-TRIM34B2RNG4 842 aa11.6□□□□□ -0.55
NPHP1-208ENST00000449600 ADGRB2O60241 1585 aa11.59□□□□□ -0.55
NPHP1-208ENST00000449600 NWD2Q9ULI1 1742 aa11.59□□□□□ -0.55
NPHP1-208ENST00000449600 USP32Q8NFA0 1604 aa11.59□□□□□ -0.55
NPHP1-208ENST00000449600 ANKRD30BQ9BXX2 1392 aa11.58□□□□□ -0.56
NPHP1-208ENST00000449600 PRAG1Q86YV5 1406 aa11.58□□□□□ -0.56
NPHP1-208ENST00000449600 DPYSL4O14531 572 aa11.57□□□□□ -0.56
NPHP1-208ENST00000449600 IQGAP3Q86VI3 1631 aa11.57□□□□□ -0.56
NPHP1-208ENST00000449600 LRPPRCP42704 1394 aaKnown RBP11.56□□□□□ -0.56
NPHP1-208ENST00000449600 GIGYF1O75420 1035 aaPredicted RBP11.56□□□□□ -0.56
NPHP1-208ENST00000449600 KCNC4Q03721 635 aa11.56□□□□□ -0.56
NPHP1-208ENST00000449600 FAM98CQ17RN3 349 aaKnown RBP11.56□□□□□ -0.56
NPHP1-208ENST00000449600 NBPF8Q3BBV2 869 aa11.56□□□□□ -0.56
NPHP1-208ENST00000449600 NBPF14Q5TI25 921 aa11.56□□□□□ -0.56
NPHP1-208ENST00000449600 RREB1Q92766 1687 aa11.55□□□□□ -0.56
NPHP1-208ENST00000449600 SPATA31A3Q5VYP0 1347 aa11.55□□□□□ -0.56
NPHP1-208ENST00000449600 CCDC144AA2RUR9 1427 aa11.54□□□□□ -0.56
NPHP1-208ENST00000449600 FOXO3O43524 673 aa11.54□□□□□ -0.56
NPHP1-208ENST00000449600 CCDC9Q9Y3X0 531 aaKnown RBP11.54□□□□□ -0.56
NPHP1-208ENST00000449600 ESCO1Q5FWF5 840 aa11.53□□□□□ -0.56
NPHP1-208ENST00000449600 TSR3Q9UJK0 312 aaKnown RBP11.53□□□□□ -0.56
NPHP1-208ENST00000449600 ROBO2Q9HCK4 1378 aa11.53□□□□□ -0.56
NPHP1-208ENST00000449600 PLCH1Q4KWH8 1693 aa11.52□□□□□ -0.56
NPHP1-208ENST00000449600 NUP188Q5SRE5 1749 aa11.52□□□□□ -0.56
NPHP1-208ENST00000449600 FAM182BQ5T319 152 aa11.52□□□□□ -0.57
NPHP1-208ENST00000449600 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.52□□□□□ -0.57
NPHP1-208ENST00000449600 NEXMIFQ5QGS0 1516 aa11.51□□□□□ -0.57
NPHP1-208ENST00000449600 APBA3O96018 575 aa11.51□□□□□ -0.57
NPHP1-208ENST00000449600 MYT1Q01538 1121 aa11.51□□□□□ -0.57
NPHP1-208ENST00000449600 XPCQ01831 940 aaPredicted RBP11.51□□□□□ -0.57
NPHP1-208ENST00000449600 FAM196AQ6ZSG2 479 aa11.51□□□□□ -0.57
NPHP1-208ENST00000449600 HPS5Q9UPZ3 1129 aa11.51□□□□□ -0.57
NPHP1-208ENST00000449600 THSD7AQ9UPZ6 1657 aa11.51□□□□□ -0.57
NPHP1-208ENST00000449600 CHD4Q14839 1912 aa11.5□□□□□ -0.57
NPHP1-208ENST00000449600 CDC42BPGQ6DT37 1551 aa11.5□□□□□ -0.57
NPHP1-208ENST00000449600 TRIM37O94972 964 aa11.5□□□□□ -0.57
NPHP1-208ENST00000449600 Q6ZNB5 142 aa11.5□□□□□ -0.57
NPHP1-208ENST00000449600 DDX12PQ92771 950 aa11.5□□□□□ -0.57
NPHP1-208ENST00000449600 LRCH3Q96II8 777 aa11.5□□□□□ -0.57
NPHP1-208ENST00000449600 TSKSQ9UJT2 592 aa11.5□□□□□ -0.57
NPHP1-208ENST00000449600 FAM83GA6ND36 823 aa11.48□□□□□ -0.57
NPHP1-208ENST00000449600 LCE2BO14633 110 aa11.48□□□□□ -0.57
NPHP1-208ENST00000449600 L3MBTL2Q969R5 705 aa11.48□□□□□ -0.57
NPHP1-208ENST00000449600 NRKQ7Z2Y5 1582 aa11.48□□□□□ -0.57
NPHP1-208ENST00000449600 NRAPQ86VF7 1730 aa11.48□□□□□ -0.57
NPHP1-208ENST00000449600 SPATA31A5Q5VU36 1347 aa11.47□□□□□ -0.57
NPHP1-208ENST00000449600 SPATA31A7Q8IWB4 1347 aa11.47□□□□□ -0.57
NPHP1-208ENST00000449600 TSR1Q2NL82 804 aaKnown RBP11.47□□□□□ -0.57
NPHP1-208ENST00000449600 SYT17Q9BSW7 474 aa11.47□□□□□ -0.57
NPHP1-208ENST00000449600 CASZ1Q86V15 1759 aa11.46□□□□□ -0.58
NPHP1-208ENST00000449600 TNS3Q68CZ2 1445 aa11.45□□□□□ -0.58
NPHP1-208ENST00000449600 PDIA6Q15084 440 aa11.45□□□□□ -0.58
NPHP1-208ENST00000449600 E9PCH4 1651 aa11.45□□□□□ -0.58
NPHP1-208ENST00000449600 HAP1P54257 671 aaPredicted RBP11.44□□□□□ -0.58
NPHP1-208ENST00000449600 RGL3Q3MIN7 710 aa11.44□□□□□ -0.58
NPHP1-208ENST00000449600 ZNF326Q5BKZ1 582 aaKnown RBP11.44□□□□□ -0.58
NPHP1-208ENST00000449600 CABLES1Q8TDN4 633 aa11.44□□□□□ -0.58
NPHP1-208ENST00000449600 DCAF11Q8TEB1 546 aa11.44□□□□□ -0.58
NPHP1-208ENST00000449600 FHDC1Q9C0D6 1143 aaPredicted RBP11.44□□□□□ -0.58
NPHP1-208ENST00000449600 MAP3K5Q99683 1374 aa11.43□□□□□ -0.58
NPHP1-208ENST00000449600 MYOM1P52179 1685 aa11.43□□□□□ -0.58
NPHP1-208ENST00000449600 GOLGB1Q14789 3259 aaKnown RBP11.43□□□□□ -0.58
NPHP1-208ENST00000449600 HSPA6P17066 643 aa11.43□□□□□ -0.58
NPHP1-208ENST00000449600 NBR1Q14596 966 aa11.43□□□□□ -0.58
NPHP1-208ENST00000449600 BTG4Q9NY30 223 aa11.43□□□□□ -0.58
NPHP1-208ENST00000449600 KDM2AQ9Y2K7 1162 aa11.43□□□□□ -0.58
NPHP1-208ENST00000449600 DLC1Q96QB1 1528 aa11.42□□□□□ -0.58
NPHP1-208ENST00000449600 TJAP1Q5JTD0 557 aa11.42□□□□□ -0.58
NPHP1-208ENST00000449600 KRT28Q7Z3Y7 464 aa11.42□□□□□ -0.58
NPHP1-208ENST00000449600 PACS2Q86VP3 889 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms