RNA–Protein interactions for RNA: ENST00000448911.1

OPTC-202, Transcript of opticin, humanhuman

TSL 2

Gene OPTC, Length 560 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPTC-202ENST00000448911 TATP17735 454 aaPredicted RBP12.75□□□□□ -0.37
OPTC-202ENST00000448911 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.75□□□□□ -0.37
OPTC-202ENST00000448911 CCDC9Q9Y3X0 531 aaKnown RBP12.75□□□□□ -0.37
OPTC-202ENST00000448911 SHANK3Q9BYB0 1731 aa12.74□□□□□ -0.37
OPTC-202ENST00000448911 AMOTQ4VCS5 1084 aa12.74□□□□□ -0.37
OPTC-202ENST00000448911 GJD4Q96KN9 370 aaPredicted RBP12.74□□□□□ -0.37
OPTC-202ENST00000448911 PHF23Q9BUL5 403 aaPredicted RBP12.74□□□□□ -0.37
OPTC-202ENST00000448911 NCBP3Q53F19 620 aaKnown RBP12.73□□□□□ -0.37
OPTC-202ENST00000448911 NGEFQ8N5V2 710 aa12.73□□□□□ -0.37
OPTC-202ENST00000448911 GAS2L2Q8NHY3 880 aa12.73□□□□□ -0.37
OPTC-202ENST00000448911 USP35Q9P2H5 1018 aa12.73□□□□□ -0.37
OPTC-202ENST00000448911 PLEKHO1Q53GL0 409 aaPredicted RBP12.72□□□□□ -0.37
OPTC-202ENST00000448911 CCDC146Q8IYE0 955 aa12.72□□□□□ -0.37
OPTC-202ENST00000448911 QTRT2Q9H974 415 aaKnown RBP12.72□□□□□ -0.37
OPTC-202ENST00000448911 SPG7Q9UQ90 795 aa12.72□□□□□ -0.37
OPTC-202ENST00000448911 DLG5Q8TDM6 1919 aa12.72□□□□□ -0.37
OPTC-202ENST00000448911 PCDH11XQ9BZA7 1347 aa12.71□□□□□ -0.37
OPTC-202ENST00000448911 PCDH11YQ9BZA8 1340 aa12.71□□□□□ -0.37
OPTC-202ENST00000448911 NFE2L2Q16236 605 aa12.71□□□□□ -0.37
OPTC-202ENST00000448911 RBM6P78332 1123 aaKnown RBP12.7□□□□□ -0.38
OPTC-202ENST00000448911 FAM98CQ17RN3 349 aaKnown RBP12.7□□□□□ -0.38
OPTC-202ENST00000448911 PHACTR3Q96KR7 559 aa12.7□□□□□ -0.38
OPTC-202ENST00000448911 ADAMTS7Q9UKP4 1686 aa12.7□□□□□ -0.38
OPTC-202ENST00000448911 MAP3K5Q99683 1374 aa12.69□□□□□ -0.38
OPTC-202ENST00000448911 APAF1O14727 1248 aa12.69□□□□□ -0.38
OPTC-202ENST00000448911 ONECUT3O60422 494 aaPredicted RBP12.69□□□□□ -0.38
OPTC-202ENST00000448911 LMOD3Q0VAK6 560 aa12.69□□□□□ -0.38
OPTC-202ENST00000448911 MTHFSDQ2M296 383 aaKnown RBP12.69□□□□□ -0.38
OPTC-202ENST00000448911 ZNF530Q6P9A1 599 aaPredicted RBP12.69□□□□□ -0.38
OPTC-202ENST00000448911 ZCRB1Q8TBF4 217 aaKnown RBP12.69□□□□□ -0.38
OPTC-202ENST00000448911 RGS17Q9UGC6 210 aaPredicted RBP12.69□□□□□ -0.38
OPTC-202ENST00000448911 VIRMAQ69YN4 1812 aaKnown RBP12.68□□□□□ -0.38
OPTC-202ENST00000448911 TMPOP42166 694 aaKnown RBP12.68□□□□□ -0.38
OPTC-202ENST00000448911 DDB1Q16531 1140 aa12.68□□□□□ -0.38
OPTC-202ENST00000448911 CCDC27Q2M243 656 aa12.68□□□□□ -0.38
OPTC-202ENST00000448911 AKAP4Q5JQC9 854 aa12.68□□□□□ -0.38
OPTC-202ENST00000448911 C1orf141Q5JVX7 400 aa12.68□□□□□ -0.38
OPTC-202ENST00000448911 SCN11AQ9UI33 1791 aa12.67□□□□□ -0.38
OPTC-202ENST00000448911 EXOC5O00471 708 aa12.67□□□□□ -0.38
OPTC-202ENST00000448911 HTATSF1O43719 755 aaKnown RBP12.67□□□□□ -0.38
OPTC-202ENST00000448911 HSP90AB1P08238 724 aaKnown RBP12.67□□□□□ -0.38
OPTC-202ENST00000448911 IFNL2Q8IZJ0 200 aa12.67□□□□□ -0.38
OPTC-202ENST00000448911 MRC1P22897 1456 aa12.66□□□□□ -0.38
OPTC-202ENST00000448911 GNAT3A8MTJ3 354 aa12.66□□□□□ -0.38
OPTC-202ENST00000448911 PHKG2P15735 406 aa12.66□□□□□ -0.38
OPTC-202ENST00000448911 RXRBP28702 533 aa12.66□□□□□ -0.38
OPTC-202ENST00000448911 ZBED9Q6R2W3 1325 aa12.65□□□□□ -0.38
OPTC-202ENST00000448911 BCL9O00512 1426 aa12.65□□□□□ -0.38
OPTC-202ENST00000448911 RGS12O14924 1447 aa12.65□□□□□ -0.38
OPTC-202ENST00000448911 A0A0G2JS52 829 aa12.65□□□□□ -0.38
OPTC-202ENST00000448911 CYP27B1O15528 508 aa12.65□□□□□ -0.38
OPTC-202ENST00000448911 RIPK4P57078 832 aa12.65□□□□□ -0.38
OPTC-202ENST00000448911 HNRNPUQ00839 825 aaKnown RBP eCLIP12.65□□□□□ -0.38
OPTC-202ENST00000448911 MYT1Q01538 1121 aa12.65□□□□□ -0.38
OPTC-202ENST00000448911 CEMIPQ8WUJ3 1361 aa12.65□□□□□ -0.38
OPTC-202ENST00000448911 BRWD3Q6RI45 1802 aa12.65□□□□□ -0.39
OPTC-202ENST00000448911 KDM6AO15550 1401 aaPredicted RBP12.64□□□□□ -0.39
OPTC-202ENST00000448911 NKX1-1Q15270 411 aaPredicted RBP12.64□□□□□ -0.39
OPTC-202ENST00000448911 POTEAQ6S8J7 498 aa12.64□□□□□ -0.39
OPTC-202ENST00000448911 SEPT12Q8IYM1 358 aa12.64□□□□□ -0.39
OPTC-202ENST00000448911 RTF1Q92541 710 aaKnown RBP12.64□□□□□ -0.39
OPTC-202ENST00000448911 DCAF5Q96JK2 942 aa12.64□□□□□ -0.39
OPTC-202ENST00000448911 RRP7AQ9Y3A4 280 aaKnown RBP12.64□□□□□ -0.39
OPTC-202ENST00000448911 TOGARAM1Q9Y4F4 1720 aa12.64□□□□□ -0.39
OPTC-202ENST00000448911 DOT1LQ8TEK3 1739 aa12.63□□□□□ -0.39
OPTC-202ENST00000448911 CALD1Q05682 793 aaKnown RBP12.63□□□□□ -0.39
OPTC-202ENST00000448911 TRIM35Q9UPQ4 493 aa12.63□□□□□ -0.39
OPTC-202ENST00000448911 SIPA1L3O60292 1781 aaPredicted RBP12.63□□□□□ -0.39
OPTC-202ENST00000448911 ZNF521Q96K83 1311 aa12.62□□□□□ -0.39
OPTC-202ENST00000448911 PDE3BQ13370 1112 aa12.62□□□□□ -0.39
OPTC-202ENST00000448911 NEUROD2Q15784 382 aa12.62□□□□□ -0.39
OPTC-202ENST00000448911 WWC1Q8IX03 1113 aa12.62□□□□□ -0.39
OPTC-202ENST00000448911 DDX54Q8TDD1 881 aaKnown RBP12.62□□□□□ -0.39
OPTC-202ENST00000448911 EP400Q96L91 3159 aa12.61□□□□□ -0.39
OPTC-202ENST00000448911 MARCH10Q8NA82 808 aaPredicted RBP12.61□□□□□ -0.39
OPTC-202ENST00000448911 IL16Q14005 1332 aa12.61□□□□□ -0.39
OPTC-202ENST00000448911 NHSQ6T4R5 1651 aa12.61□□□□□ -0.39
OPTC-202ENST00000448911 RNMTO43148 476 aaKnown RBP12.6□□□□□ -0.39
OPTC-202ENST00000448911 WDR63Q8IWG1 891 aa12.6□□□□□ -0.39
OPTC-202ENST00000448911 ITGB4P16144 1822 aa12.6□□□□□ -0.39
OPTC-202ENST00000448911 PAPPAQ13219 1627 aa12.59□□□□□ -0.39
OPTC-202ENST00000448911 ERVV-2B6SEH9 535 aa12.59□□□□□ -0.39
OPTC-202ENST00000448911 MPRIPQ6WCQ1 1025 aa12.59□□□□□ -0.39
OPTC-202ENST00000448911 MCM10Q7L590 875 aa12.59□□□□□ -0.39
OPTC-202ENST00000448911 KRT27Q7Z3Y8 459 aa12.59□□□□□ -0.39
OPTC-202ENST00000448911 IL17REQ8NFR9 667 aa12.59□□□□□ -0.39
OPTC-202ENST00000448911 SBF2Q86WG5 1849 aa12.59□□□□□ -0.39
OPTC-202ENST00000448911 TEFQ10587 303 aa12.58□□□□□ -0.4
OPTC-202ENST00000448911 BABAM1Q9NWV8 329 aa12.58□□□□□ -0.4
OPTC-202ENST00000448911 SALL2Q9Y467 1007 aaPredicted RBP12.58□□□□□ -0.4
OPTC-202ENST00000448911 KDM3BQ7LBC6 1761 aa12.58□□□□□ -0.4
OPTC-202ENST00000448911 GOLGA2Q08379 1002 aa12.57□□□□□ -0.4
OPTC-202ENST00000448911 DCTN1Q14203 1278 aa12.57□□□□□ -0.4
OPTC-202ENST00000448911 YTHDC1Q96MU7 727 aaKnown RBP12.57□□□□□ -0.4
OPTC-202ENST00000448911 SLC52A2Q9HAB3 445 aa12.57□□□□□ -0.4
OPTC-202ENST00000448911 IFT57Q9NWB7 429 aa12.57□□□□□ -0.4
OPTC-202ENST00000448911 E9PSI1 815 aa12.56□□□□□ -0.4
OPTC-202ENST00000448911 GNAI1P63096 354 aa12.56□□□□□ -0.4
OPTC-202ENST00000448911 FAM196AQ6ZSG2 479 aa12.56□□□□□ -0.4
OPTC-202ENST00000448911 THUMPD2Q9BTF0 503 aaKnown RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms