RNA–Protein interactions for RNA: ENST00000448748.1

LINC00349-201, long intergenic non-protein coding RNA 349, humanhuman

TSL 5 BASIC

Gene LINC00349, Length 841 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00349-201ENST00000448748 ADAM32Q8TC27 787 aa11.33□□□□□ -0.6
LINC00349-201ENST00000448748 MAP4K5Q9Y4K4 846 aa11.33□□□□□ -0.6
LINC00349-201ENST00000448748 GLI2P10070 1586 aa11.33□□□□□ -0.6
LINC00349-201ENST00000448748 NR3C2P08235 984 aa11.32□□□□□ -0.6
LINC00349-201ENST00000448748 NR5A1Q13285 461 aa11.31□□□□□ -0.6
LINC00349-201ENST00000448748 PPRC1Q5VV67 1664 aaKnown RBP11.3□□□□□ -0.6
LINC00349-201ENST00000448748 ASXL2Q76L83 1435 aa11.3□□□□□ -0.6
LINC00349-201ENST00000448748 POTECB2RU33 542 aa11.3□□□□□ -0.6
LINC00349-201ENST00000448748 CAPN5O15484 640 aaPredicted RBP11.3□□□□□ -0.6
LINC00349-201ENST00000448748 GPR37L1O60883 481 aa11.3□□□□□ -0.6
LINC00349-201ENST00000448748 FSHRP23945 695 aa11.3□□□□□ -0.6
LINC00349-201ENST00000448748 SLC10A4Q96EP9 437 aa11.3□□□□□ -0.6
LINC00349-201ENST00000448748 RAPGEF6Q8TEU7 1601 aa11.3□□□□□ -0.6
LINC00349-201ENST00000448748 ZNF787Q6DD87 383 aa11.29□□□□□ -0.6
LINC00349-201ENST00000448748 NDUFB9Q9Y6M9 179 aa11.29□□□□□ -0.6
LINC00349-201ENST00000448748 MAP3K4Q9Y6R4 1608 aa11.28□□□□□ -0.6
LINC00349-201ENST00000448748 WDR4P57081 412 aaKnown RBP11.28□□□□□ -0.6
LINC00349-201ENST00000448748 FAM9AQ8IZU1 332 aaPredicted RBP11.28□□□□□ -0.6
LINC00349-201ENST00000448748 KLF16Q9BXK1 252 aaPredicted RBP11.28□□□□□ -0.6
LINC00349-201ENST00000448748 EPRSP07814 1512 aaKnown RBP11.27□□□□□ -0.61
LINC00349-201ENST00000448748 ZBBXA8MT70 800 aa11.27□□□□□ -0.61
LINC00349-201ENST00000448748 APBB1O00213 710 aa11.27□□□□□ -0.61
LINC00349-201ENST00000448748 FBXO45P0C2W1 286 aa11.27□□□□□ -0.61
LINC00349-201ENST00000448748 TIMP2P16035 220 aa11.27□□□□□ -0.61
LINC00349-201ENST00000448748 ATP13A2Q9NQ11 1180 aa11.27□□□□□ -0.61
LINC00349-201ENST00000448748 FHOD3Q2V2M9 1422 aa11.26□□□□□ -0.61
LINC00349-201ENST00000448748 NUP153P49790 1475 aaKnown RBP11.26□□□□□ -0.61
LINC00349-201ENST00000448748 ARHGAP35Q9NRY4 1499 aa11.26□□□□□ -0.61
LINC00349-201ENST00000448748 WDR7Q9Y4E6 1490 aa11.26□□□□□ -0.61
LINC00349-201ENST00000448748 TMEM132AQ24JP5 1023 aa11.26□□□□□ -0.61
LINC00349-201ENST00000448748 KCTD15Q96SI1 283 aaPredicted RBP11.26□□□□□ -0.61
LINC00349-201ENST00000448748 GMPR2Q9P2T1 348 aaKnown RBP11.26□□□□□ -0.61
LINC00349-201ENST00000448748 CDV3Q9UKY7 258 aaKnown RBP11.26□□□□□ -0.61
LINC00349-201ENST00000448748 BMP1P13497 986 aa11.25□□□□□ -0.61
LINC00349-201ENST00000448748 DZIP3Q86Y13 1208 aaKnown RBP11.25□□□□□ -0.61
LINC00349-201ENST00000448748 ITPKCQ96DU7 683 aa11.25□□□□□ -0.61
LINC00349-201ENST00000448748 ZFAND3Q9H8U3 227 aa11.25□□□□□ -0.61
LINC00349-201ENST00000448748 TBC1D2BQ9UPU7 963 aa11.25□□□□□ -0.61
LINC00349-201ENST00000448748 ZIC2O95409 532 aaPredicted RBP11.24□□□□□ -0.61
LINC00349-201ENST00000448748 ATP10BO94823 1461 aa11.24□□□□□ -0.61
LINC00349-201ENST00000448748 CFAP43Q8NDM7 1665 aa11.24□□□□□ -0.61
LINC00349-201ENST00000448748 MCM6Q14566 821 aa11.23□□□□□ -0.61
LINC00349-201ENST00000448748 CCDC116Q8IYX3 515 aa11.23□□□□□ -0.61
LINC00349-201ENST00000448748 TRIM46Q7Z4K8 759 aa11.22□□□□□ -0.61
LINC00349-201ENST00000448748 NR1H3Q13133 447 aa11.21□□□□□ -0.61
LINC00349-201ENST00000448748 NBPF20Q3BBV1 942 aa11.21□□□□□ -0.61
LINC00349-201ENST00000448748 INTS6LQ5JSJ4 861 aaKnown RBP11.21□□□□□ -0.61
LINC00349-201ENST00000448748 PCDHB9Q9Y5E1 797 aa11.21□□□□□ -0.61
LINC00349-201ENST00000448748 TSPOAP1O95153 1857 aa11.21□□□□□ -0.62
LINC00349-201ENST00000448748 LRRIQ1Q96JM4 1722 aa11.21□□□□□ -0.62
LINC00349-201ENST00000448748 ABCA9Q8IUA7 1624 aa11.2□□□□□ -0.62
LINC00349-201ENST00000448748 PPP1R26Q5T8A7 1209 aaPredicted RBP11.2□□□□□ -0.62
LINC00349-201ENST00000448748 EMILIN1Q9Y6C2 1016 aa11.2□□□□□ -0.62
LINC00349-201ENST00000448748 TTBK1Q5TCY1 1321 aaPredicted RBP11.19□□□□□ -0.62
LINC00349-201ENST00000448748 C11orf95C9JLR9 678 aaPredicted RBP11.19□□□□□ -0.62
LINC00349-201ENST00000448748 FAM69CQ0P6D2 419 aa11.19□□□□□ -0.62
LINC00349-201ENST00000448748 GDPD2Q9HCC8 539 aa11.19□□□□□ -0.62
LINC00349-201ENST00000448748 PRM3Q9NNZ6 103 aa11.19□□□□□ -0.62
LINC00349-201ENST00000448748 HECW1Q76N89 1606 aa11.19□□□□□ -0.62
LINC00349-201ENST00000448748 FMN1Q68DA7 1419 aa11.18□□□□□ -0.62
LINC00349-201ENST00000448748 RAB15P59190 212 aa11.18□□□□□ -0.62
LINC00349-201ENST00000448748 MAGI3Q5TCQ9 1506 aa11.18□□□□□ -0.62
LINC00349-201ENST00000448748 IRF5Q13568 498 aa11.17□□□□□ -0.62
LINC00349-201ENST00000448748 MRPL14Q6P1L8 145 aaKnown RBP11.17□□□□□ -0.62
LINC00349-201ENST00000448748 SENP2Q9HC62 589 aa11.17□□□□□ -0.62
LINC00349-201ENST00000448748 ESPNB1AK53 854 aa11.16□□□□□ -0.62
LINC00349-201ENST00000448748 SNRPBP14678 240 aaKnown RBP11.16□□□□□ -0.62
LINC00349-201ENST00000448748 TRIM47Q96LD4 638 aa11.16□□□□□ -0.62
LINC00349-201ENST00000448748 KDM6BO15054 1643 aa11.16□□□□□ -0.62
LINC00349-201ENST00000448748 PCF11O94913 1555 aaKnown RBP11.16□□□□□ -0.62
LINC00349-201ENST00000448748 UBTFP17480 764 aaKnown RBP11.15□□□□□ -0.62
LINC00349-201ENST00000448748 ABL2P42684 1182 aa11.15□□□□□ -0.62
LINC00349-201ENST00000448748 DHX9Q08211 1270 aaKnown RBP11.15□□□□□ -0.62
LINC00349-201ENST00000448748 ZFP42Q96MM3 310 aa11.15□□□□□ -0.62
LINC00349-201ENST00000448748 TMPRSS4Q9NRS4 437 aa11.15□□□□□ -0.62
LINC00349-201ENST00000448748 PGPEP1Q9NXJ5 209 aa11.15□□□□□ -0.62
LINC00349-201ENST00000448748 CDK13Q14004 1512 aaKnown RBP11.14□□□□□ -0.63
LINC00349-201ENST00000448748 TEX14Q8IWB6 1497 aa11.14□□□□□ -0.63
LINC00349-201ENST00000448748 GIGYF1O75420 1035 aaPredicted RBP11.14□□□□□ -0.63
LINC00349-201ENST00000448748 MEIOBQ8N635 442 aa11.14□□□□□ -0.63
LINC00349-201ENST00000448748 PURBQ96QR8 312 aaKnown RBP11.14□□□□□ -0.63
LINC00349-201ENST00000448748 ERVH48-1M5A8F1 160 aa11.13□□□□□ -0.63
LINC00349-201ENST00000448748 CBLBQ13191 982 aa11.13□□□□□ -0.63
LINC00349-201ENST00000448748 KIFC2Q96AC6 838 aa11.13□□□□□ -0.63
LINC00349-201ENST00000448748 ZNF330Q9Y3S2 320 aaPredicted RBP11.13□□□□□ -0.63
LINC00349-201ENST00000448748 FYCO1Q9BQS8 1478 aa11.12□□□□□ -0.63
LINC00349-201ENST00000448748 CLIP1P30622 1438 aa11.12□□□□□ -0.63
LINC00349-201ENST00000448748 CASKIN1Q8WXD9 1431 aa11.12□□□□□ -0.63
LINC00349-201ENST00000448748 COG6Q9Y2V7 657 aa11.12□□□□□ -0.63
LINC00349-201ENST00000448748 COL17A1Q9UMD9 1497 aaPredicted RBP11.12□□□□□ -0.63
LINC00349-201ENST00000448748 TTC37Q6PGP7 1564 aa11.11□□□□□ -0.63
LINC00349-201ENST00000448748 SCARF1Q14162 830 aa11.11□□□□□ -0.63
LINC00349-201ENST00000448748 C6orf118Q5T5N4 469 aa11.11□□□□□ -0.63
LINC00349-201ENST00000448748 SEPT12Q8IYM1 358 aa11.11□□□□□ -0.63
LINC00349-201ENST00000448748 ZNF784Q8NCA9 323 aaPredicted RBP11.11□□□□□ -0.63
LINC00349-201ENST00000448748 ZNF775Q96BV0 537 aaPredicted RBP11.11□□□□□ -0.63
LINC00349-201ENST00000448748 CD109Q6YHK3 1445 aa11.1□□□□□ -0.63
LINC00349-201ENST00000448748 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.1□□□□□ -0.63
LINC00349-201ENST00000448748 MCCD1P59942 119 aaPredicted RBP11.1□□□□□ -0.63
LINC00349-201ENST00000448748 VAC14Q08AM6 782 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms