RNA–Protein interactions for RNA: ENST00000448530.5

VCP-203, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 950 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-203ENST00000448530 MEGF6O75095 1541 aa27.12■■□□□ 1.93
VCP-203ENST00000448530 ANO8Q9HCE9 1232 aaPredicted RBP27.12■■□□□ 1.93
VCP-203ENST00000448530 MAP2P11137 1827 aaKnown RBP27.11■■□□□ 1.93
VCP-203ENST00000448530 TATP17735 454 aaPredicted RBP27.11■■□□□ 1.93
VCP-203ENST00000448530 STK32BQ9NY57 414 aa27.11■■□□□ 1.93
VCP-203ENST00000448530 PANK3Q9H999 370 aa27.1■■□□□ 1.93
VCP-203ENST00000448530 ANKRD26Q9UPS8 1709 aa27.1■■□□□ 1.93
VCP-203ENST00000448530 SYTL4Q96C24 671 aaPredicted RBP27.09■■□□□ 1.93
VCP-203ENST00000448530 SPON1Q9HCB6 807 aa27.09■■□□□ 1.93
VCP-203ENST00000448530 SHANK3Q9BYB0 1731 aa27.08■■□□□ 1.93
VCP-203ENST00000448530 DOT1LQ8TEK3 1739 aa27.07■■□□□ 1.92
VCP-203ENST00000448530 TNNT2P45379 298 aaPredicted RBP27.06■■□□□ 1.92
VCP-203ENST00000448530 PRIM1P49642 420 aaKnown RBP27.05■■□□□ 1.92
VCP-203ENST00000448530 PPP1R1BQ9UD71 204 aaPredicted RBP27.05■■□□□ 1.92
VCP-203ENST00000448530 WASHC2AQ641Q2 1341 aa27.05■■□□□ 1.92
VCP-203ENST00000448530 SLC15A2Q16348 729 aa27.04■■□□□ 1.92
VCP-203ENST00000448530 POLKQ9UBT6 870 aa27.03■■□□□ 1.92
VCP-203ENST00000448530 NSD2O96028 1365 aa27.02■■□□□ 1.92
VCP-203ENST00000448530 PCDH11XQ9BZA7 1347 aa27.02■■□□□ 1.92
VCP-203ENST00000448530 PCDH11YQ9BZA8 1340 aa27.02■■□□□ 1.92
VCP-203ENST00000448530 CASZ1Q86V15 1759 aa27.01■■□□□ 1.91
VCP-203ENST00000448530 SLC27A3Q5K4L6 730 aa26.99■■□□□ 1.91
VCP-203ENST00000448530 KNSTRNQ9Y448 316 aa26.99■■□□□ 1.91
VCP-203ENST00000448530 MORC1Q86VD1 984 aa26.97■■□□□ 1.91
VCP-203ENST00000448530 ZBTB7AO95365 584 aa26.96■■□□□ 1.91
VCP-203ENST00000448530 EYA1Q99502 592 aa26.96■■□□□ 1.91
VCP-203ENST00000448530 PDGFDQ9GZP0 370 aaPredicted RBP26.96■■□□□ 1.91
VCP-203ENST00000448530 PAPPAQ13219 1627 aa26.95■■□□□ 1.91
VCP-203ENST00000448530 LRRC4BQ9NT99 713 aa26.95■■□□□ 1.9
VCP-203ENST00000448530 SPG7Q9UQ90 795 aa26.95■■□□□ 1.9
VCP-203ENST00000448530 NCAPD2Q15021 1401 aa26.95■■□□□ 1.9
VCP-203ENST00000448530 PKD1L3Q7Z443 1732 aa26.94■■□□□ 1.9
VCP-203ENST00000448530 KIF7Q2M1P5 1343 aa26.93■■□□□ 1.9
VCP-203ENST00000448530 EIF4A2Q14240 407 aaKnown RBP26.93■■□□□ 1.9
VCP-203ENST00000448530 CYP27B1O15528 508 aa26.92■■□□□ 1.9
VCP-203ENST00000448530 LY75O60449 1722 aa26.92■■□□□ 1.9
VCP-203ENST00000448530 ATF5Q9Y2D1 282 aaPredicted RBP26.91■■□□□ 1.9
VCP-203ENST00000448530 ZNF827Q17R98 1081 aa26.9■■□□□ 1.9
VCP-203ENST00000448530 MTFR1LQ9H019 292 aa26.9■■□□□ 1.9
VCP-203ENST00000448530 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.89■■□□□ 1.99e-6■□□□□ 9.4
VCP-203ENST00000448530 CCNL1Q9UK58 526 aaPredicted RBP26.89■■□□□ 1.9
VCP-203ENST00000448530 KCNQ4P56696 695 aa26.88■■□□□ 1.89
VCP-203ENST00000448530 MPRIPQ6WCQ1 1025 aa26.88■■□□□ 1.89
VCP-203ENST00000448530 AKT1S1Q96B36 256 aa26.87■■□□□ 1.89
VCP-203ENST00000448530 TFCP2L1Q9NZI6 479 aa26.86■■□□□ 1.89
VCP-203ENST00000448530 HMGB2P26583 209 aaKnown RBP26.85■■□□□ 1.89
VCP-203ENST00000448530 ITGB4P16144 1822 aa26.85■■□□□ 1.89
VCP-203ENST00000448530 DCAF8L1A6NGE4 600 aa26.84■■□□□ 1.89
VCP-203ENST00000448530 NKX1-1Q15270 411 aaPredicted RBP26.84■■□□□ 1.89
VCP-203ENST00000448530 QSER1Q2KHR3 1735 aa26.84■■□□□ 1.89
VCP-203ENST00000448530 IGSF1Q8N6C5 1336 aa26.84■■□□□ 1.89
VCP-203ENST00000448530 TOGARAM1Q9Y4F4 1720 aa26.83■■□□□ 1.89
VCP-203ENST00000448530 PTGER2P43116 358 aa26.83■■□□□ 1.89
VCP-203ENST00000448530 IFNL2Q8IZJ0 200 aa26.83■■□□□ 1.89
VCP-203ENST00000448530 AMER1Q5JTC6 1135 aaPredicted RBP26.82■■□□□ 1.88
VCP-203ENST00000448530 SMARCC1Q92922 1105 aaPredicted RBP26.82■■□□□ 1.88
VCP-203ENST00000448530 PALLDQ8WX93 1383 aa26.82■■□□□ 1.88
VCP-203ENST00000448530 PLEKHG2Q9H7P9 1386 aa26.82■■□□□ 1.88
VCP-203ENST00000448530 PHKG2P15735 406 aa26.8■■□□□ 1.88
VCP-203ENST00000448530 SLC16A10Q8TF71 515 aa26.8■■□□□ 1.88
VCP-203ENST00000448530 TMOD3Q9NYL9 352 aa26.79■■□□□ 1.88
VCP-203ENST00000448530 TUBGCP6Q96RT7 1819 aa26.79■■□□□ 1.88
VCP-203ENST00000448530 PNPLA7Q6ZV29 1317 aa26.78■■□□□ 1.88
VCP-203ENST00000448530 C5P01031 1676 aa26.77■■□□□ 1.88
VCP-203ENST00000448530 PLEKHO1Q53GL0 409 aaPredicted RBP26.77■■□□□ 1.88
VCP-203ENST00000448530 PIGBQ92521 554 aa26.77■■□□□ 1.88
VCP-203ENST00000448530 MSH5O43196 834 aa26.76■■□□□ 1.87
VCP-203ENST00000448530 ARXQ96QS3 562 aa26.76■■□□□ 1.87
VCP-203ENST00000448530 SGIP1Q9BQI5 828 aa26.75■■□□□ 1.87
VCP-203ENST00000448530 HSP90AB1P08238 724 aaKnown RBP26.74■■□□□ 1.87
VCP-203ENST00000448530 POLD1P28340 1107 aa26.74■■□□□ 1.87
VCP-203ENST00000448530 AMOTQ4VCS5 1084 aa26.74■■□□□ 1.87
VCP-203ENST00000448530 CC2D1BQ5T0F9 858 aaKnown RBP26.74■■□□□ 1.87
VCP-203ENST00000448530 PER1O15534 1290 aaPredicted RBP26.73■■□□□ 1.87
VCP-203ENST00000448530 FHDC1Q9C0D6 1143 aaPredicted RBP26.73■■□□□ 1.87
VCP-203ENST00000448530 TAF1LQ8IZX4 1826 aa26.73■■□□□ 1.87
VCP-203ENST00000448530 MTHFSP49914 203 aa26.72■■□□□ 1.87
VCP-203ENST00000448530 SULT6B1Q6IMI4 303 aa26.72■■□□□ 1.87
VCP-203ENST00000448530 ZNF530Q6P9A1 599 aaPredicted RBP26.72■■□□□ 1.87
VCP-203ENST00000448530 AEBP1Q8IUX7 1158 aa26.71■■□□□ 1.87
VCP-203ENST00000448530 IL13P35225 146 aa26.7■■□□□ 1.86
VCP-203ENST00000448530 DCAF5Q96JK2 942 aa26.7■■□□□ 1.86
VCP-203ENST00000448530 SYT17Q9BSW7 474 aa26.7■■□□□ 1.86
VCP-203ENST00000448530 CNGB1Q14028 1251 aaPredicted RBP26.69■■□□□ 1.86
VCP-203ENST00000448530 C1orf141Q5JVX7 400 aa26.69■■□□□ 1.86
VCP-203ENST00000448530 FLAD1Q8NFF5 587 aa26.69■■□□□ 1.86
VCP-203ENST00000448530 ERVV-2B6SEH9 535 aa26.68■■□□□ 1.86
VCP-203ENST00000448530 COL23A1Q86Y22 540 aaPredicted RBP26.68■■□□□ 1.86
VCP-203ENST00000448530 AK7Q96M32 723 aa26.68■■□□□ 1.86
VCP-203ENST00000448530 ASAP1Q9ULH1 1129 aa26.68■■□□□ 1.86
VCP-203ENST00000448530 LOC102724428A0A0B4J2F2 783 aa26.67■■□□□ 1.86
VCP-203ENST00000448530 SIK1P57059 783 aa26.67■■□□□ 1.86
VCP-203ENST00000448530 C4BP0C0L5 1744 aa26.67■■□□□ 1.86
VCP-203ENST00000448530 KDRP35968 1356 aa26.66■■□□□ 1.86
VCP-203ENST00000448530 NPC1L1Q9UHC9 1359 aa26.66■■□□□ 1.86
VCP-203ENST00000448530 COL24A1Q17RW2 1714 aa26.65■■□□□ 1.86
VCP-203ENST00000448530 KLHL34Q8N239 644 aa26.65■■□□□ 1.86
VCP-203ENST00000448530 CABP4P57796 275 aa26.64■■□□□ 1.86
VCP-203ENST00000448530 ATG3Q9NT62 314 aa26.64■■□□□ 1.86
VCP-203ENST00000448530 DIAPH1O60610 1272 aaKnown RBP26.63■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms