RNA–Protein interactions for RNA: ENST00000448192.1

DDX56-207, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-207ENST00000448192 ANKRD26Q9UPS8 1709 aa24.41■■□□□ 1.5
DDX56-207ENST00000448192 TXNRD1Q16881 649 aa24.41■■□□□ 1.5
DDX56-207ENST00000448192 ZCRB1Q8TBF4 217 aaKnown RBP24.4■■□□□ 1.5
DDX56-207ENST00000448192 PANK3Q9H999 370 aa24.4■■□□□ 1.5
DDX56-207ENST00000448192 RAPGEF4Q8WZA2 1011 aa24.39■■□□□ 1.49
DDX56-207ENST00000448192 ANO8Q9HCE9 1232 aaPredicted RBP24.38■■□□□ 1.49
DDX56-207ENST00000448192 TNNT2P45379 298 aaPredicted RBP24.37■■□□□ 1.49
DDX56-207ENST00000448192 DOT1LQ8TEK3 1739 aa24.37■■□□□ 1.49
DDX56-207ENST00000448192 TATP17735 454 aaPredicted RBP24.35■■□□□ 1.49
DDX56-207ENST00000448192 SYTL4Q96C24 671 aaPredicted RBP24.35■■□□□ 1.49
DDX56-207ENST00000448192 STK32BQ9NY57 414 aa24.33■■□□□ 1.49
DDX56-207ENST00000448192 POLKQ9UBT6 870 aa24.33■■□□□ 1.49
DDX56-207ENST00000448192 WASHC2AQ641Q2 1341 aa24.33■■□□□ 1.48
DDX56-207ENST00000448192 PRIM1P49642 420 aaKnown RBP24.32■■□□□ 1.48
DDX56-207ENST00000448192 CASZ1Q86V15 1759 aa24.31■■□□□ 1.48
DDX56-207ENST00000448192 SPON1Q9HCB6 807 aa24.3■■□□□ 1.48
DDX56-207ENST00000448192 SLC15A2Q16348 729 aa24.29■■□□□ 1.48
DDX56-207ENST00000448192 PDGFDQ9GZP0 370 aaPredicted RBP24.28■■□□□ 1.48
DDX56-207ENST00000448192 NSD2O96028 1365 aa24.28■■□□□ 1.48
DDX56-207ENST00000448192 PCDH11XQ9BZA7 1347 aa24.27■■□□□ 1.48
DDX56-207ENST00000448192 PCDH11YQ9BZA8 1340 aa24.27■■□□□ 1.48
DDX56-207ENST00000448192 EYA1Q99502 592 aa24.26■■□□□ 1.47
DDX56-207ENST00000448192 KNSTRNQ9Y448 316 aa24.26■■□□□ 1.47
DDX56-207ENST00000448192 KIF7Q2M1P5 1343 aa24.26■■□□□ 1.47
DDX56-207ENST00000448192 PKD1L3Q7Z443 1732 aa24.26■■□□□ 1.47
DDX56-207ENST00000448192 PAPPAQ13219 1627 aa24.25■■□□□ 1.47
DDX56-207ENST00000448192 MORC1Q86VD1 984 aa24.25■■□□□ 1.47
DDX56-207ENST00000448192 LRRC4BQ9NT99 713 aa24.25■■□□□ 1.47
DDX56-207ENST00000448192 PPP1R1BQ9UD71 204 aaPredicted RBP24.25■■□□□ 1.47
DDX56-207ENST00000448192 NCAPD2Q15021 1401 aa24.24■■□□□ 1.47
DDX56-207ENST00000448192 ZBTB7AO95365 584 aa24.23■■□□□ 1.47
DDX56-207ENST00000448192 EIF4A2Q14240 407 aaKnown RBP24.23■■□□□ 1.47
DDX56-207ENST00000448192 LY75O60449 1722 aa24.23■■□□□ 1.47
DDX56-207ENST00000448192 CYP27B1O15528 508 aa24.22■■□□□ 1.47
DDX56-207ENST00000448192 SLC27A3Q5K4L6 730 aa24.22■■□□□ 1.47
DDX56-207ENST00000448192 SPG7Q9UQ90 795 aa24.21■■□□□ 1.47
DDX56-207ENST00000448192 KCNQ4P56696 695 aa24.2■■□□□ 1.46
DDX56-207ENST00000448192 ZNF827Q17R98 1081 aa24.2■■□□□ 1.46
DDX56-207ENST00000448192 ATF5Q9Y2D1 282 aaPredicted RBP24.2■■□□□ 1.46
DDX56-207ENST00000448192 ITGB4P16144 1822 aa24.19■■□□□ 1.46
DDX56-207ENST00000448192 TOGARAM1Q9Y4F4 1720 aa24.18■■□□□ 1.46
DDX56-207ENST00000448192 MPRIPQ6WCQ1 1025 aa24.17■■□□□ 1.46
DDX56-207ENST00000448192 CCNL1Q9UK58 526 aaPredicted RBP24.16■■□□□ 1.46
DDX56-207ENST00000448192 AMER1Q5JTC6 1135 aaPredicted RBP24.15■■□□□ 1.46
DDX56-207ENST00000448192 AKT1S1Q96B36 256 aa24.15■■□□□ 1.46
DDX56-207ENST00000448192 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.15■■□□□ 1.46
DDX56-207ENST00000448192 QSER1Q2KHR3 1735 aa24.14■■□□□ 1.45
DDX56-207ENST00000448192 MTFR1LQ9H019 292 aa24.14■■□□□ 1.45
DDX56-207ENST00000448192 TUBGCP6Q96RT7 1819 aa24.14■■□□□ 1.45
DDX56-207ENST00000448192 IGSF1Q8N6C5 1336 aa24.13■■□□□ 1.45
DDX56-207ENST00000448192 PTGER2P43116 358 aa24.12■■□□□ 1.45
DDX56-207ENST00000448192 NKX1-1Q15270 411 aaPredicted RBP24.12■■□□□ 1.45
DDX56-207ENST00000448192 TFCP2L1Q9NZI6 479 aa24.12■■□□□ 1.45
DDX56-207ENST00000448192 IFNL2Q8IZJ0 200 aa24.11■■□□□ 1.45
DDX56-207ENST00000448192 PHKG2P15735 406 aa24.1■■□□□ 1.45
DDX56-207ENST00000448192 PALLDQ8WX93 1383 aa24.1■■□□□ 1.45
DDX56-207ENST00000448192 C5P01031 1676 aa24.1■■□□□ 1.45
DDX56-207ENST00000448192 PER1O15534 1290 aaPredicted RBP24.09■■□□□ 1.45
DDX56-207ENST00000448192 CC2D1BQ5T0F9 858 aaKnown RBP24.09■■□□□ 1.45
DDX56-207ENST00000448192 PIGBQ92521 554 aa24.08■■□□□ 1.45
DDX56-207ENST00000448192 PNPLA7Q6ZV29 1317 aa24.08■■□□□ 1.44
DDX56-207ENST00000448192 TAF1LQ8IZX4 1826 aa24.07■■□□□ 1.44
DDX56-207ENST00000448192 CNGB1Q14028 1251 aaPredicted RBP24.07■■□□□ 1.44
DDX56-207ENST00000448192 SMARCC1Q92922 1105 aaPredicted RBP24.07■■□□□ 1.44
DDX56-207ENST00000448192 AEBP1Q8IUX7 1158 aa24.06■■□□□ 1.44
DDX56-207ENST00000448192 TMOD3Q9NYL9 352 aa24.06■■□□□ 1.44
DDX56-207ENST00000448192 PLEKHG2Q9H7P9 1386 aa24.05■■□□□ 1.44
DDX56-207ENST00000448192 PLEKHO1Q53GL0 409 aaPredicted RBP24.05■■□□□ 1.44
DDX56-207ENST00000448192 SGIP1Q9BQI5 828 aa24.05■■□□□ 1.44
DDX56-207ENST00000448192 MTHFSP49914 203 aa24.04■■□□□ 1.44
DDX56-207ENST00000448192 SULT6B1Q6IMI4 303 aa24.04■■□□□ 1.44
DDX56-207ENST00000448192 SLC16A10Q8TF71 515 aa24.04■■□□□ 1.44
DDX56-207ENST00000448192 MSH5O43196 834 aa24.03■■□□□ 1.44
DDX56-207ENST00000448192 IL13P35225 146 aa24.03■■□□□ 1.44
DDX56-207ENST00000448192 DCAF8L1A6NGE4 600 aa24.02■■□□□ 1.44
DDX56-207ENST00000448192 AMOTQ4VCS5 1084 aa24.02■■□□□ 1.44
DDX56-207ENST00000448192 ZNF530Q6P9A1 599 aaPredicted RBP24.02■■□□□ 1.44
DDX56-207ENST00000448192 ARXQ96QS3 562 aa24.02■■□□□ 1.44
DDX56-207ENST00000448192 FHDC1Q9C0D6 1143 aaPredicted RBP24.02■■□□□ 1.44
DDX56-207ENST00000448192 HMGB2P26583 209 aaKnown RBP24.01■■□□□ 1.43
DDX56-207ENST00000448192 HSP90AB1P08238 724 aaKnown RBP24■■□□□ 1.43
DDX56-207ENST00000448192 ASAP1Q9ULH1 1129 aa24■■□□□ 1.43
DDX56-207ENST00000448192 C4BP0C0L5 1744 aa23.99■■□□□ 1.43
DDX56-207ENST00000448192 COL23A1Q86Y22 540 aaPredicted RBP23.99■■□□□ 1.43
DDX56-207ENST00000448192 COL24A1Q17RW2 1714 aa23.98■■□□□ 1.43
DDX56-207ENST00000448192 POLD1P28340 1107 aa23.98■■□□□ 1.43
DDX56-207ENST00000448192 C1orf141Q5JVX7 400 aa23.98■■□□□ 1.43
DDX56-207ENST00000448192 DCAF5Q96JK2 942 aa23.98■■□□□ 1.43
DDX56-207ENST00000448192 SYT17Q9BSW7 474 aa23.98■■□□□ 1.43
DDX56-207ENST00000448192 KDRP35968 1356 aa23.98■■□□□ 1.43
DDX56-207ENST00000448192 LOC102724428A0A0B4J2F2 783 aa23.97■■□□□ 1.43
DDX56-207ENST00000448192 ERVV-2B6SEH9 535 aa23.97■■□□□ 1.43
DDX56-207ENST00000448192 SIK1P57059 783 aa23.97■■□□□ 1.43
DDX56-207ENST00000448192 NPC1L1Q9UHC9 1359 aa23.97■■□□□ 1.43
DDX56-207ENST00000448192 AK7Q96M32 723 aa23.96■■□□□ 1.43
DDX56-207ENST00000448192 ATG3Q9NT62 314 aa23.96■■□□□ 1.43
DDX56-207ENST00000448192 KDM6AO15550 1401 aaPredicted RBP23.95■■□□□ 1.42
DDX56-207ENST00000448192 DIAPH1O60610 1272 aaKnown RBP23.95■■□□□ 1.42
DDX56-207ENST00000448192 HMOX1P09601 288 aa23.94■■□□□ 1.42
DDX56-207ENST00000448192 CABP4P57796 275 aa23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms