RNA–Protein interactions for RNA: ENST00000448162.6

CCHCR1-207, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 5

Gene CCHCR1, Length 699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-207ENST00000448162 ZNF827Q17R98 1081 aa27.43■■□□□ 1.98
CCHCR1-207ENST00000448162 RTL1A6NKG5 1358 aa27.43■■□□□ 1.98
CCHCR1-207ENST00000448162 GOLGB1Q14789 3259 aaKnown RBP27.42■■□□□ 1.98
CCHCR1-207ENST00000448162 ANKRD26Q9UPS8 1709 aa27.42■■□□□ 1.98
CCHCR1-207ENST00000448162 BTAF1O14981 1849 aa27.41■■□□□ 1.98
CCHCR1-207ENST00000448162 RRS1Q15050 365 aaKnown RBP27.41■■□□□ 1.98
CCHCR1-207ENST00000448162 KIF24Q5T7B8 1368 aa27.4■■□□□ 1.98
CCHCR1-207ENST00000448162 WASHC2AQ641Q2 1341 aa27.4■■□□□ 1.98
CCHCR1-207ENST00000448162 ZNF784Q8NCA9 323 aaPredicted RBP27.39■■□□□ 1.98
CCHCR1-207ENST00000448162 FAM208AQ9UK61 1670 aaKnown RBP27.38■■□□□ 1.97
CCHCR1-207ENST00000448162 MAP3K5Q99683 1374 aa27.37■■□□□ 1.97
CCHCR1-207ENST00000448162 ARXQ96QS3 562 aa27.37■■□□□ 1.97
CCHCR1-207ENST00000448162 PER1O15534 1290 aaPredicted RBP27.36■■□□□ 1.97
CCHCR1-207ENST00000448162 AMPHP49418 695 aa27.36■■□□□ 1.97
CCHCR1-207ENST00000448162 AKT1S1Q96B36 256 aa27.36■■□□□ 1.97
CCHCR1-207ENST00000448162 NSD2O96028 1365 aa27.35■■□□□ 1.97
CCHCR1-207ENST00000448162 INSRP06213 1382 aa27.34■■□□□ 1.97
CCHCR1-207ENST00000448162 MAP2P11137 1827 aaKnown RBP27.33■■□□□ 1.97
CCHCR1-207ENST00000448162 AMER1Q5JTC6 1135 aaPredicted RBP27.33■■□□□ 1.97
CCHCR1-207ENST00000448162 FLT4P35916 1363 aa27.33■■□□□ 1.97
CCHCR1-207ENST00000448162 EMILIN1Q9Y6C2 1016 aa27.32■■□□□ 1.96
CCHCR1-207ENST00000448162 RGPD2P0DJD1 1756 aa27.31■■□□□ 1.96
CCHCR1-207ENST00000448162 HSP90AB2PQ58FF8 381 aa27.31■■□□□ 1.96
CCHCR1-207ENST00000448162 DDX54Q8TDD1 881 aaKnown RBP27.31■■□□□ 1.96
CCHCR1-207ENST00000448162 POLKQ9UBT6 870 aa27.31■■□□□ 1.96
CCHCR1-207ENST00000448162 SLC27A3Q5K4L6 730 aa27.29■■□□□ 1.96
CCHCR1-207ENST00000448162 PNPLA7Q6ZV29 1317 aa27.28■■□□□ 1.96
CCHCR1-207ENST00000448162 LTV1Q96GA3 475 aaPredicted RBP27.28■■□□□ 1.96
CCHCR1-207ENST00000448162 KNSTRNQ9Y448 316 aa27.28■■□□□ 1.96
CCHCR1-207ENST00000448162 COL24A1Q17RW2 1714 aa27.27■■□□□ 1.96
CCHCR1-207ENST00000448162 KAT6BQ8WYB5 2073 aa27.26■■□□□ 1.95
CCHCR1-207ENST00000448162 SMG6Q86US8 1419 aaKnown RBP27.26■■□□□ 1.95
CCHCR1-207ENST00000448162 KCNQ4P56696 695 aa27.26■■□□□ 1.95
CCHCR1-207ENST00000448162 NBPF6Q5VWK0 638 aa27.26■■□□□ 1.95
CCHCR1-207ENST00000448162 SLC16A10Q8TF71 515 aa27.26■■□□□ 1.95
CCHCR1-207ENST00000448162 NBPF4Q96M43 638 aa27.26■■□□□ 1.95
CCHCR1-207ENST00000448162 QSER1Q2KHR3 1735 aa27.26■■□□□ 1.95
CCHCR1-207ENST00000448162 PRIM1P49642 420 aaKnown RBP27.25■■□□□ 1.95
CCHCR1-207ENST00000448162 NCAPD2Q15021 1401 aa27.24■■□□□ 1.95
CCHCR1-207ENST00000448162 MEGF6O75095 1541 aa27.23■■□□□ 1.95
CCHCR1-207ENST00000448162 SHANK3Q9BYB0 1731 aa27.23■■□□□ 1.95
CCHCR1-207ENST00000448162 CHD4Q14839 1912 aa27.23■■□□□ 1.95
CCHCR1-207ENST00000448162 NPC1L1Q9UHC9 1359 aa27.22■■□□□ 1.95
CCHCR1-207ENST00000448162 TUBGCP6Q96RT7 1819 aa27.2■■□□□ 1.95
CCHCR1-207ENST00000448162 LY75O60449 1722 aa27.2■■□□□ 1.94
CCHCR1-207ENST00000448162 ZCRB1Q8TBF4 217 aaKnown RBP27.2■■□□□ 1.94
CCHCR1-207ENST00000448162 DOT1LQ8TEK3 1739 aa27.19■■□□□ 1.94
CCHCR1-207ENST00000448162 TNNT2P45379 298 aaPredicted RBP27.19■■□□□ 1.94
CCHCR1-207ENST00000448162 MORC1Q86VD1 984 aa27.19■■□□□ 1.94
CCHCR1-207ENST00000448162 SYTL4Q96C24 671 aaPredicted RBP27.19■■□□□ 1.94
CCHCR1-207ENST00000448162 TFCP2L1Q9NZI6 479 aa27.18■■□□□ 1.94
CCHCR1-207ENST00000448162 PPM1GO15355 546 aaPredicted RBP27.15■■□□□ 1.94
CCHCR1-207ENST00000448162 POLD1P28340 1107 aa27.15■■□□□ 1.94
CCHCR1-207ENST00000448162 GPR162Q16538 588 aa27.15■■□□□ 1.94
CCHCR1-207ENST00000448162 USHBP1Q8N6Y0 703 aa27.15■■□□□ 1.94
CCHCR1-207ENST00000448162 NLGN2Q8NFZ4 835 aa27.15■■□□□ 1.94
CCHCR1-207ENST00000448162 C1QTNF8P60827 252 aa27.13■■□□□ 1.93
CCHCR1-207ENST00000448162 EIF4A2Q14240 407 aaKnown RBP27.13■■□□□ 1.93
CCHCR1-207ENST00000448162 EYA1Q99502 592 aa27.13■■□□□ 1.93
CCHCR1-207ENST00000448162 CCNL1Q9UK58 526 aaPredicted RBP27.12■■□□□ 1.93
CCHCR1-207ENST00000448162 KLHL34Q8N239 644 aa27.11■■□□□ 1.93
CCHCR1-207ENST00000448162 COL23A1Q86Y22 540 aaPredicted RBP27.1■■□□□ 1.93
CCHCR1-207ENST00000448162 CC2D1BQ5T0F9 858 aaKnown RBP27.08■■□□□ 1.93
CCHCR1-207ENST00000448162 CEP350Q5VT06 3117 aa27.06■■□□□ 1.92
CCHCR1-207ENST00000448162 PKD1L3Q7Z443 1732 aa27.06■■□□□ 1.92
CCHCR1-207ENST00000448162 IGSF1Q8N6C5 1336 aa27.06■■□□□ 1.92
CCHCR1-207ENST00000448162 YBX3P16989 372 aaKnown RBP eCLIP27.05■■□□□ 1.92
CCHCR1-207ENST00000448162 RAPGEF4Q8WZA2 1011 aa27.05■■□□□ 1.92
CCHCR1-207ENST00000448162 SENP3-EIF4A1A0A087X0R7 540 aa27.04■■□□□ 1.92
CCHCR1-207ENST00000448162 TATP17735 454 aaPredicted RBP27.04■■□□□ 1.92
CCHCR1-207ENST00000448162 PELP1Q8IZL8 1130 aaKnown RBP27.03■■□□□ 1.92
CCHCR1-207ENST00000448162 PLEKHG2Q9H7P9 1386 aa27.02■■□□□ 1.92
CCHCR1-207ENST00000448162 MTHFSP49914 203 aa27.02■■□□□ 1.92
CCHCR1-207ENST00000448162 IL13P35225 146 aa27.01■■□□□ 1.91
CCHCR1-207ENST00000448162 CYP27B1O15528 508 aa27■■□□□ 1.91
CCHCR1-207ENST00000448162 PCDH11XQ9BZA7 1347 aa26.99■■□□□ 1.91
CCHCR1-207ENST00000448162 PCDH11YQ9BZA8 1340 aa26.99■■□□□ 1.91
CCHCR1-207ENST00000448162 ZEB1P37275 1124 aaPredicted RBP26.99■■□□□ 1.91
CCHCR1-207ENST00000448162 MSL1Q68DK7 614 aa26.99■■□□□ 1.91
CCHCR1-207ENST00000448162 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.99■■□□□ 1.91
CCHCR1-207ENST00000448162 C5P01031 1676 aa26.98■■□□□ 1.91
CCHCR1-207ENST00000448162 MSH5O43196 834 aa26.98■■□□□ 1.91
CCHCR1-207ENST00000448162 AMIGO3Q86WK7 504 aa26.98■■□□□ 1.91
CCHCR1-207ENST00000448162 PALLDQ8WX93 1383 aa26.97■■□□□ 1.91
CCHCR1-207ENST00000448162 COL3A1P02461 1466 aaPredicted RBP26.97■■□□□ 1.91
CCHCR1-207ENST00000448162 KDRP35968 1356 aa26.97■■□□□ 1.91
CCHCR1-207ENST00000448162 GRIN3BO60391 1043 aa26.96■■□□□ 1.91
CCHCR1-207ENST00000448162 GIGYF1O75420 1035 aaPredicted RBP26.96■■□□□ 1.91
CCHCR1-207ENST00000448162 TOGARAM1Q9Y4F4 1720 aa26.96■■□□□ 1.91
CCHCR1-207ENST00000448162 MPRIPQ6WCQ1 1025 aa26.95■■□□□ 1.9
CCHCR1-207ENST00000448162 TAF1LQ8IZX4 1826 aa26.95■■□□□ 1.9
CCHCR1-207ENST00000448162 NKX1-1Q15270 411 aaPredicted RBP26.94■■□□□ 1.9
CCHCR1-207ENST00000448162 CD2APQ9Y5K6 639 aa26.93■■□□□ 1.9
CCHCR1-207ENST00000448162 AEBP1Q8IUX7 1158 aa26.92■■□□□ 1.9
CCHCR1-207ENST00000448162 FLAD1Q8NFF5 587 aa26.92■■□□□ 1.9
CCHCR1-207ENST00000448162 PIGBQ92521 554 aa26.9■■□□□ 1.9
CCHCR1-207ENST00000448162 SPG7Q9UQ90 795 aa26.9■■□□□ 1.9
CCHCR1-207ENST00000448162 C4BP0C0L5 1744 aa26.9■■□□□ 1.9
CCHCR1-207ENST00000448162 SMIM5Q71RC9 77 aa26.89■■□□□ 1.9
CCHCR1-207ENST00000448162 ITGB4P16144 1822 aa26.88■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms