RNA–Protein interactions for RNA: ENST00000447872.5

VSTM1-206, Transcript of V-set and transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene VSTM1, Length 1,041 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM1-206ENST00000447872 SYT17Q9BSW7 474 aa14.44□□□□□ -0.1
VSTM1-206ENST00000447872 FHDC1Q9C0D6 1143 aaPredicted RBP14.44□□□□□ -0.1
VSTM1-206ENST00000447872 ZNF827Q17R98 1081 aa14.43□□□□□ -0.1
VSTM1-206ENST00000447872 NBPF6Q5VWK0 638 aa14.43□□□□□ -0.1
VSTM1-206ENST00000447872 DIEXFQ68CQ4 756 aaKnown RBP14.43□□□□□ -0.1
VSTM1-206ENST00000447872 NBPF4Q96M43 638 aa14.43□□□□□ -0.1
VSTM1-206ENST00000447872 ARXQ96QS3 562 aa14.43□□□□□ -0.1
VSTM1-206ENST00000447872 SGIP1Q9BQI5 828 aa14.43□□□□□ -0.1
VSTM1-206ENST00000447872 RAPGEF4Q8WZA2 1011 aa14.42□□□□□ -0.1
VSTM1-206ENST00000447872 AKT1S1Q96B36 256 aa14.42□□□□□ -0.1
VSTM1-206ENST00000447872 PCDH10Q9P2E7 1040 aa14.42□□□□□ -0.1
VSTM1-206ENST00000447872 RTL1A6NKG5 1358 aa14.42□□□□□ -0.1
VSTM1-206ENST00000447872 CGNL1Q0VF96 1302 aa14.41□□□□□ -0.1
VSTM1-206ENST00000447872 SLC16A10Q8TF71 515 aa14.41□□□□□ -0.1
VSTM1-206ENST00000447872 TFCP2L1Q9NZI6 479 aa14.41□□□□□ -0.1
VSTM1-206ENST00000447872 NHSQ6T4R5 1651 aa14.41□□□□□ -0.1
VSTM1-206ENST00000447872 CASZ1Q86V15 1759 aa14.4□□□□□ -0.1
VSTM1-206ENST00000447872 KCNQ4P56696 695 aa14.4□□□□□ -0.1
VSTM1-206ENST00000447872 USHBP1Q8N6Y0 703 aa14.4□□□□□ -0.1
VSTM1-206ENST00000447872 SMG6Q86US8 1419 aaKnown RBP14.4□□□□□ -0.1
VSTM1-206ENST00000447872 LTN1O94822 1766 aa14.39□□□□□ -0.11
VSTM1-206ENST00000447872 TATP17735 454 aaPredicted RBP14.39□□□□□ -0.11
VSTM1-206ENST00000447872 HSP90AB2PQ58FF8 381 aa14.39□□□□□ -0.11
VSTM1-206ENST00000447872 TIMELESSQ9UNS1 1208 aa14.39□□□□□ -0.11
VSTM1-206ENST00000447872 CAPN15O75808 1086 aa14.38□□□□□ -0.11
VSTM1-206ENST00000447872 POLD1P28340 1107 aa14.38□□□□□ -0.11
VSTM1-206ENST00000447872 CARD14Q9BXL6 1004 aa14.38□□□□□ -0.11
VSTM1-206ENST00000447872 INSRP06213 1382 aa14.37□□□□□ -0.11
VSTM1-206ENST00000447872 HSPA6P17066 643 aa14.37□□□□□ -0.11
VSTM1-206ENST00000447872 CCNL1Q9UK58 526 aaPredicted RBP14.37□□□□□ -0.11
VSTM1-206ENST00000447872 MEGF6O75095 1541 aa14.36□□□□□ -0.11
VSTM1-206ENST00000447872 FLT4P35916 1363 aa14.36□□□□□ -0.11
VSTM1-206ENST00000447872 KIF24Q5T7B8 1368 aa14.36□□□□□ -0.11
VSTM1-206ENST00000447872 PPM1GO15355 546 aaPredicted RBP14.36□□□□□ -0.11
VSTM1-206ENST00000447872 HMGB2P26583 209 aaKnown RBP14.36□□□□□ -0.11
VSTM1-206ENST00000447872 PNPLA7Q6ZV29 1317 aa14.36□□□□□ -0.11
VSTM1-206ENST00000447872 NSD2O96028 1365 aa14.35□□□□□ -0.11
VSTM1-206ENST00000447872 MSH5O43196 834 aa14.35□□□□□ -0.11
VSTM1-206ENST00000447872 PRELPP51888 382 aa14.35□□□□□ -0.11
VSTM1-206ENST00000447872 PCDH11XQ9BZA7 1347 aa14.35□□□□□ -0.11
VSTM1-206ENST00000447872 PCDH11YQ9BZA8 1340 aa14.35□□□□□ -0.11
VSTM1-206ENST00000447872 MAP3K5Q99683 1374 aa14.34□□□□□ -0.11
VSTM1-206ENST00000447872 GPR162Q16538 588 aa14.34□□□□□ -0.11
VSTM1-206ENST00000447872 KLHL34Q8N239 644 aa14.34□□□□□ -0.11
VSTM1-206ENST00000447872 EMILIN1Q9Y6C2 1016 aa14.34□□□□□ -0.11
VSTM1-206ENST00000447872 MYOM1P52179 1685 aa14.33□□□□□ -0.11
VSTM1-206ENST00000447872 FAM208AQ9UK61 1670 aaKnown RBP14.33□□□□□ -0.11
VSTM1-206ENST00000447872 BTAF1O14981 1849 aa14.33□□□□□ -0.12
VSTM1-206ENST00000447872 PAPPAQ13219 1627 aa14.33□□□□□ -0.12
VSTM1-206ENST00000447872 NSD3Q9BZ95 1437 aa14.32□□□□□ -0.12
VSTM1-206ENST00000447872 MPRIPQ6WCQ1 1025 aa14.32□□□□□ -0.12
VSTM1-206ENST00000447872 CYP27B1O15528 508 aa14.31□□□□□ -0.12
VSTM1-206ENST00000447872 COL23A1Q86Y22 540 aaPredicted RBP14.31□□□□□ -0.12
VSTM1-206ENST00000447872 POLR3GLQ9BT43 218 aa14.31□□□□□ -0.12
VSTM1-206ENST00000447872 SPG7Q9UQ90 795 aa14.31□□□□□ -0.12
VSTM1-206ENST00000447872 SMARCC1Q92922 1105 aaPredicted RBP14.3□□□□□ -0.12
VSTM1-206ENST00000447872 WASHC2AQ641Q2 1341 aa14.3□□□□□ -0.12
VSTM1-206ENST00000447872 PELP1Q8IZL8 1130 aaKnown RBP14.29□□□□□ -0.12
VSTM1-206ENST00000447872 FLAD1Q8NFF5 587 aa14.29□□□□□ -0.12
VSTM1-206ENST00000447872 SHANK3Q9BYB0 1731 aa14.29□□□□□ -0.12
VSTM1-206ENST00000447872 NKX1-1Q15270 411 aaPredicted RBP14.28□□□□□ -0.12
VSTM1-206ENST00000447872 COL13A1Q5TAT6 717 aaPredicted RBP14.28□□□□□ -0.12
VSTM1-206ENST00000447872 PALLDQ8WX93 1383 aa14.28□□□□□ -0.12
VSTM1-206ENST00000447872 POLKQ9UBT6 870 aa14.28□□□□□ -0.12
VSTM1-206ENST00000447872 GOLGB1Q14789 3259 aaKnown RBP14.27□□□□□ -0.12
VSTM1-206ENST00000447872 MSL1Q68DK7 614 aa14.27□□□□□ -0.13
VSTM1-206ENST00000447872 PIGBQ92521 554 aa14.27□□□□□ -0.13
VSTM1-206ENST00000447872 EYA1Q99502 592 aa14.27□□□□□ -0.13
VSTM1-206ENST00000447872 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.27□□□□□ -0.13
VSTM1-206ENST00000447872 TNNT2P45379 298 aaPredicted RBP14.26□□□□□ -0.13
VSTM1-206ENST00000447872 NLGN2Q8NFZ4 835 aa14.26□□□□□ -0.13
VSTM1-206ENST00000447872 KAT6BQ8WYB5 2073 aa14.26□□□□□ -0.13
VSTM1-206ENST00000447872 EIF4G2P78344 907 aaKnown RBP eCLIP14.25□□□□□ -0.13
VSTM1-206ENST00000447872 AK7Q96M32 723 aa14.25□□□□□ -0.13
VSTM1-206ENST00000447872 DOT1LQ8TEK3 1739 aa14.24□□□□□ -0.13
VSTM1-206ENST00000447872 GRIN3BO60391 1043 aa14.24□□□□□ -0.13
VSTM1-206ENST00000447872 IFNL2Q8IZJ0 200 aa14.24□□□□□ -0.13
VSTM1-206ENST00000447872 TNS4Q8IZW8 715 aa14.24□□□□□ -0.13
VSTM1-206ENST00000447872 TMOD3Q9NYL9 352 aa14.24□□□□□ -0.13
VSTM1-206ENST00000447872 LOC102724428A0A0B4J2F2 783 aa14.23□□□□□ -0.13
VSTM1-206ENST00000447872 SIK1P57059 783 aa14.23□□□□□ -0.13
VSTM1-206ENST00000447872 EIF4A2Q14240 407 aaKnown RBP14.23□□□□□ -0.13
VSTM1-206ENST00000447872 PANK3Q9H999 370 aa14.23□□□□□ -0.13
VSTM1-206ENST00000447872 CD2APQ9Y5K6 639 aa14.23□□□□□ -0.13
VSTM1-206ENST00000447872 NCAPD2Q15021 1401 aa14.23□□□□□ -0.13
VSTM1-206ENST00000447872 RGPD2P0DJD1 1756 aa14.22□□□□□ -0.13
VSTM1-206ENST00000447872 HSPA5P11021 654 aaKnown RBP14.22□□□□□ -0.13
VSTM1-206ENST00000447872 PHKG2P15735 406 aa14.22□□□□□ -0.13
VSTM1-206ENST00000447872 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.21□□□□□ -0.13
VSTM1-206ENST00000447872 PHF14O94880 888 aa14.21□□□□□ -0.13
VSTM1-206ENST00000447872 ASAP1Q9ULH1 1129 aa14.21□□□□□ -0.13
VSTM1-206ENST00000447872 YBX3P16989 372 aaKnown RBP eCLIP14.2□□□□□ -0.14
VSTM1-206ENST00000447872 LY75O60449 1722 aa14.2□□□□□ -0.14
VSTM1-206ENST00000447872 HSP90AB1P08238 724 aaKnown RBP14.19□□□□□ -0.14
VSTM1-206ENST00000447872 SSFA2P28290 1259 aa14.19□□□□□ -0.14
VSTM1-206ENST00000447872 ATP6V1AP38606 617 aa14.19□□□□□ -0.14
VSTM1-206ENST00000447872 SMIM5Q71RC9 77 aa14.19□□□□□ -0.14
VSTM1-206ENST00000447872 LINC00116Q8NCU8 138 aa14.19□□□□□ -0.14
VSTM1-206ENST00000447872 KIF20BQ96Q89 1820 aa14.18□□□□□ -0.14
VSTM1-206ENST00000447872 GNPATO15228 680 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms