RNA–Protein interactions for RNA: ENST00000447632.6

TTC39A-212, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TTC39A, Length 2,790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-212ENST00000447632 RSPH6AQ9H0K4 717 aa11.26□□□□□ -0.61
TTC39A-212ENST00000447632 NOP58Q9Y2X3 529 aaKnown RBP11.26□□□□□ -0.61
TTC39A-212ENST00000447632 APAF1O14727 1248 aa11.26□□□□□ -0.61
TTC39A-212ENST00000447632 FCHSD2O94868 740 aa11.26□□□□□ -0.61
TTC39A-212ENST00000447632 TATP17735 454 aaPredicted RBP11.26□□□□□ -0.61
TTC39A-212ENST00000447632 LTN1O94822 1766 aa11.25□□□□□ -0.61
TTC39A-212ENST00000447632 RXRBP28702 533 aa11.25□□□□□ -0.61
TTC39A-212ENST00000447632 CRB1P82279 1406 aa11.25□□□□□ -0.61
TTC39A-212ENST00000447632 MTHFSDQ2M296 383 aaKnown RBP11.25□□□□□ -0.61
TTC39A-212ENST00000447632 CRYBG1Q9Y4K1 1723 aa11.25□□□□□ -0.61
TTC39A-212ENST00000447632 ANKRD26Q9UPS8 1709 aa11.24□□□□□ -0.61
TTC39A-212ENST00000447632 EXOC5O00471 708 aa11.24□□□□□ -0.61
TTC39A-212ENST00000447632 SEPT12Q8IYM1 358 aa11.24□□□□□ -0.61
TTC39A-212ENST00000447632 RGPD5Q99666 1765 aa11.24□□□□□ -0.61
TTC39A-212ENST00000447632 COL3A1P02461 1466 aaPredicted RBP11.24□□□□□ -0.61
TTC39A-212ENST00000447632 NEFMP07197 916 aa11.24□□□□□ -0.61
TTC39A-212ENST00000447632 ABCA3Q99758 1704 aa11.24□□□□□ -0.61
TTC39A-212ENST00000447632 DCTN1Q14203 1278 aa11.23□□□□□ -0.61
TTC39A-212ENST00000447632 ZCRB1Q8TBF4 217 aaKnown RBP11.23□□□□□ -0.61
TTC39A-212ENST00000447632 PLEKHF1Q96S99 279 aa11.23□□□□□ -0.61
TTC39A-212ENST00000447632 MAPK8IP3Q9UPT6 1336 aa11.23□□□□□ -0.61
TTC39A-212ENST00000447632 RBM6P78332 1123 aaKnown RBP11.23□□□□□ -0.61
TTC39A-212ENST00000447632 DDB1Q16531 1140 aa11.23□□□□□ -0.61
TTC39A-212ENST00000447632 COL18A1P39060 1754 aa11.23□□□□□ -0.61
TTC39A-212ENST00000447632 DEKP35659 375 aaKnown RBP11.22□□□□□ -0.61
TTC39A-212ENST00000447632 ZNF530Q6P9A1 599 aaPredicted RBP11.22□□□□□ -0.61
TTC39A-212ENST00000447632 MPRIPQ6WCQ1 1025 aa11.22□□□□□ -0.61
TTC39A-212ENST00000447632 RUNDC1Q96C34 613 aa11.22□□□□□ -0.61
TTC39A-212ENST00000447632 THUMPD2Q9BTF0 503 aaKnown RBP11.22□□□□□ -0.61
TTC39A-212ENST00000447632 RIPK4P57078 832 aa11.22□□□□□ -0.61
TTC39A-212ENST00000447632 PDE3BQ13370 1112 aa11.22□□□□□ -0.61
TTC39A-212ENST00000447632 PLEKHO1Q53GL0 409 aaPredicted RBP11.22□□□□□ -0.61
TTC39A-212ENST00000447632 COL14A1Q05707 1796 aaKnown RBP11.21□□□□□ -0.61
TTC39A-212ENST00000447632 USP54Q70EL1 1684 aa11.21□□□□□ -0.61
TTC39A-212ENST00000447632 NBR1Q14596 966 aa11.21□□□□□ -0.61
TTC39A-212ENST00000447632 CYP27B1O15528 508 aa11.21□□□□□ -0.62
TTC39A-212ENST00000447632 LMO7Q8WWI1 1683 aa11.21□□□□□ -0.62
TTC39A-212ENST00000447632 BARGINQ6ZT62 677 aa11.2□□□□□ -0.62
TTC39A-212ENST00000447632 MCM10Q7L590 875 aa11.2□□□□□ -0.62
TTC39A-212ENST00000447632 LGR6Q9HBX8 967 aa11.2□□□□□ -0.62
TTC39A-212ENST00000447632 THRAP3Q9Y2W1 955 aaKnown RBP11.2□□□□□ -0.62
TTC39A-212ENST00000447632 EP400Q96L91 3159 aa11.2□□□□□ -0.62
TTC39A-212ENST00000447632 MEGF6O75095 1541 aa11.2□□□□□ -0.62
TTC39A-212ENST00000447632 TMPOP42166 694 aaKnown RBP11.2□□□□□ -0.62
TTC39A-212ENST00000447632 MARCH10Q8NA82 808 aaPredicted RBP11.2□□□□□ -0.62
TTC39A-212ENST00000447632 SYTL4Q96C24 671 aaPredicted RBP11.2□□□□□ -0.62
TTC39A-212ENST00000447632 ACSBG1Q96GR2 724 aa11.2□□□□□ -0.62
TTC39A-212ENST00000447632 SPG7Q9UQ90 795 aa11.2□□□□□ -0.62
TTC39A-212ENST00000447632 IPO9Q96P70 1041 aaKnown RBP11.19□□□□□ -0.62
TTC39A-212ENST00000447632 PNNQ9H307 717 aaKnown RBP11.19□□□□□ -0.62
TTC39A-212ENST00000447632 ATRNO75882 1429 aa11.19□□□□□ -0.62
TTC39A-212ENST00000447632 KDRP35968 1356 aa11.19□□□□□ -0.62
TTC39A-212ENST00000447632 C1orf141Q5JVX7 400 aa11.19□□□□□ -0.62
TTC39A-212ENST00000447632 RGPD2P0DJD1 1756 aa11.18□□□□□ -0.62
TTC39A-212ENST00000447632 AMOTQ4VCS5 1084 aa11.18□□□□□ -0.62
TTC39A-212ENST00000447632 MIS18AQ9NYP9 233 aa11.18□□□□□ -0.62
TTC39A-212ENST00000447632 LAS1LQ9Y4W2 734 aaKnown RBP11.18□□□□□ -0.62
TTC39A-212ENST00000447632 PLCH1Q4KWH8 1693 aa11.17□□□□□ -0.62
TTC39A-212ENST00000447632 ONECUT3O60422 494 aaPredicted RBP11.17□□□□□ -0.62
TTC39A-212ENST00000447632 ANP32AP39687 249 aaKnown RBP11.17□□□□□ -0.62
TTC39A-212ENST00000447632 RRP1P56182 461 aaKnown RBP11.17□□□□□ -0.62
TTC39A-212ENST00000447632 NFE2L2Q16236 605 aa11.17□□□□□ -0.62
TTC39A-212ENST00000447632 EXOC6Q8TAG9 804 aa11.17□□□□□ -0.62
TTC39A-212ENST00000447632 PHKG2P15735 406 aa11.17□□□□□ -0.62
TTC39A-212ENST00000447632 PTF1AQ7RTS3 328 aa11.17□□□□□ -0.62
TTC39A-212ENST00000447632 IFNL2Q8IZJ0 200 aa11.17□□□□□ -0.62
TTC39A-212ENST00000447632 RTF1Q92541 710 aaKnown RBP11.17□□□□□ -0.62
TTC39A-212ENST00000447632 GNAT3A8MTJ3 354 aa11.16□□□□□ -0.62
TTC39A-212ENST00000447632 KRT27Q7Z3Y8 459 aa11.16□□□□□ -0.62
TTC39A-212ENST00000447632 IL17REQ8NFR9 667 aa11.16□□□□□ -0.62
TTC39A-212ENST00000447632 GAS2L2Q8NHY3 880 aa11.16□□□□□ -0.62
TTC39A-212ENST00000447632 CDCA7Q9BWT1 371 aaPredicted RBP11.16□□□□□ -0.62
TTC39A-212ENST00000447632 KCNQ2O43526 872 aa11.16□□□□□ -0.62
TTC39A-212ENST00000447632 TRIM35Q9UPQ4 493 aa11.16□□□□□ -0.62
TTC39A-212ENST00000447632 PRIM1P49642 420 aaKnown RBP11.15□□□□□ -0.62
TTC39A-212ENST00000447632 NFATC2IPQ8NCF5 419 aa11.15□□□□□ -0.62
TTC39A-212ENST00000447632 AKAP4Q5JQC9 854 aa11.15□□□□□ -0.63
TTC39A-212ENST00000447632 RCAN3Q9UKA8 241 aa11.15□□□□□ -0.63
TTC39A-212ENST00000447632 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.14□□□□□ -0.63
TTC39A-212ENST00000447632 ZBTB47Q9UFB7 747 aaPredicted RBP11.14□□□□□ -0.63
TTC39A-212ENST00000447632 PCDH11XQ9BZA7 1347 aa11.14□□□□□ -0.63
TTC39A-212ENST00000447632 PCDH11YQ9BZA8 1340 aa11.14□□□□□ -0.63
TTC39A-212ENST00000447632 KAT6BQ8WYB5 2073 aa11.13□□□□□ -0.63
TTC39A-212ENST00000447632 WWC1Q8IX03 1113 aa11.13□□□□□ -0.63
TTC39A-212ENST00000447632 CDCA7LQ96GN5 454 aa11.13□□□□□ -0.63
TTC39A-212ENST00000447632 OVOS2A0A0G2JMS6 1433 aa11.13□□□□□ -0.63
TTC39A-212ENST00000447632 GLI3P10071 1580 aa11.13□□□□□ -0.63
TTC39A-212ENST00000447632 ABCC6O95255 1503 aa11.13□□□□□ -0.63
TTC39A-212ENST00000447632 DISP2A7MBM2 1401 aa11.13□□□□□ -0.63
TTC39A-212ENST00000447632 RNMTO43148 476 aaKnown RBP11.13□□□□□ -0.63
TTC39A-212ENST00000447632 TRIM37O94972 964 aa11.12□□□□□ -0.63
TTC39A-212ENST00000447632 CABP4P57796 275 aa11.12□□□□□ -0.63
TTC39A-212ENST00000447632 SLC39A6Q13433 755 aa11.12□□□□□ -0.63
TTC39A-212ENST00000447632 SPINK5Q9NQ38 1064 aaPredicted RBP11.12□□□□□ -0.63
TTC39A-212ENST00000447632 NRAPQ86VF7 1730 aa11.12□□□□□ -0.63
TTC39A-212ENST00000447632 TEFQ10587 303 aa11.12□□□□□ -0.63
TTC39A-212ENST00000447632 DCAF5Q96JK2 942 aa11.12□□□□□ -0.63
TTC39A-212ENST00000447632 NCAPD2Q15021 1401 aa11.12□□□□□ -0.63
TTC39A-212ENST00000447632 NWD2Q9ULI1 1742 aa11.12□□□□□ -0.63
TTC39A-212ENST00000447632 ILDR2Q71H61 639 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 284.2 ms