RNA–Protein interactions for RNA: ENST00000447456.1

CCDC18-205, Transcript of coiled-coil domain containing 18, humanhuman

TSL 1 (best)

Gene CCDC18, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18-205ENST00000447456 BARGINQ6ZT62 677 aa12.2□□□□□ -0.46
CCDC18-205ENST00000447456 GJD4Q96KN9 370 aaPredicted RBP12.2□□□□□ -0.46
CCDC18-205ENST00000447456 RGPD2P0DJD1 1756 aa12.2□□□□□ -0.46
CCDC18-205ENST00000447456 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.19□□□□□ -0.46
CCDC18-205ENST00000447456 SPG7Q9UQ90 795 aa12.19□□□□□ -0.46
CCDC18-205ENST00000447456 NGEFQ8N5V2 710 aa12.18□□□□□ -0.46
CCDC18-205ENST00000447456 GAS2L2Q8NHY3 880 aa12.18□□□□□ -0.46
CCDC18-205ENST00000447456 RBM6P78332 1123 aaKnown RBP12.17□□□□□ -0.46
CCDC18-205ENST00000447456 CCDC146Q8IYE0 955 aa12.17□□□□□ -0.46
CCDC18-205ENST00000447456 PLEKHF1Q96S99 279 aa12.17□□□□□ -0.46
CCDC18-205ENST00000447456 OVOS2A0A0G2JMS6 1433 aa12.17□□□□□ -0.46
CCDC18-205ENST00000447456 PARP4Q9UKK3 1724 aaKnown RBP12.17□□□□□ -0.46
CCDC18-205ENST00000447456 A0A0G2JS52 829 aa12.16□□□□□ -0.46
CCDC18-205ENST00000447456 MYT1Q01538 1121 aa12.16□□□□□ -0.46
CCDC18-205ENST00000447456 FAM98CQ17RN3 349 aaKnown RBP12.16□□□□□ -0.46
CCDC18-205ENST00000447456 C1orf141Q5JVX7 400 aa12.16□□□□□ -0.46
CCDC18-205ENST00000447456 ZCRB1Q8TBF4 217 aaKnown RBP12.16□□□□□ -0.46
CCDC18-205ENST00000447456 DISP2A7MBM2 1401 aa12.15□□□□□ -0.46
CCDC18-205ENST00000447456 EXOC5O00471 708 aa12.15□□□□□ -0.46
CCDC18-205ENST00000447456 RXRBP28702 533 aa12.15□□□□□ -0.46
CCDC18-205ENST00000447456 LMOD3Q0VAK6 560 aa12.15□□□□□ -0.46
CCDC18-205ENST00000447456 NFE2L2Q16236 605 aa12.15□□□□□ -0.46
CCDC18-205ENST00000447456 ZNF530Q6P9A1 599 aaPredicted RBP12.15□□□□□ -0.46
CCDC18-205ENST00000447456 MEGF6O75095 1541 aa12.15□□□□□ -0.46
CCDC18-205ENST00000447456 PCDH11XQ9BZA7 1347 aa12.14□□□□□ -0.47
CCDC18-205ENST00000447456 PCDH11YQ9BZA8 1340 aa12.14□□□□□ -0.47
CCDC18-205ENST00000447456 APAF1O14727 1248 aa12.14□□□□□ -0.47
CCDC18-205ENST00000447456 HSP90AB1P08238 724 aaKnown RBP12.14□□□□□ -0.47
CCDC18-205ENST00000447456 DDB1Q16531 1140 aa12.14□□□□□ -0.47
CCDC18-205ENST00000447456 NCBP3Q53F19 620 aaKnown RBP12.14□□□□□ -0.47
CCDC18-205ENST00000447456 PHACTR3Q96KR7 559 aa12.14□□□□□ -0.47
CCDC18-205ENST00000447456 ONECUT3O60422 494 aaPredicted RBP12.13□□□□□ -0.47
CCDC18-205ENST00000447456 TMPOP42166 694 aaKnown RBP12.13□□□□□ -0.47
CCDC18-205ENST00000447456 MTHFSDQ2M296 383 aaKnown RBP12.13□□□□□ -0.47
CCDC18-205ENST00000447456 AKAP4Q5JQC9 854 aa12.13□□□□□ -0.47
CCDC18-205ENST00000447456 IFNL2Q8IZJ0 200 aa12.13□□□□□ -0.47
CCDC18-205ENST00000447456 RTF1Q92541 710 aaKnown RBP12.13□□□□□ -0.47
CCDC18-205ENST00000447456 TNS2Q63HR2 1409 aa12.12□□□□□ -0.47
CCDC18-205ENST00000447456 WNK3Q9BYP7 1800 aa12.12□□□□□ -0.47
CCDC18-205ENST00000447456 GNAT3A8MTJ3 354 aa12.12□□□□□ -0.47
CCDC18-205ENST00000447456 HTATSF1O43719 755 aaKnown RBP12.12□□□□□ -0.47
CCDC18-205ENST00000447456 RIPK4P57078 832 aa12.12□□□□□ -0.47
CCDC18-205ENST00000447456 HNRNPUQ00839 825 aaKnown RBP eCLIP12.12□□□□□ -0.47
CCDC18-205ENST00000447456 PDE3BQ13370 1112 aa12.12□□□□□ -0.47
CCDC18-205ENST00000447456 GLI3P10071 1580 aa12.12□□□□□ -0.47
CCDC18-205ENST00000447456 PKD1L3Q7Z443 1732 aa12.11□□□□□ -0.47
CCDC18-205ENST00000447456 MAP3K5Q99683 1374 aa12.11□□□□□ -0.47
CCDC18-205ENST00000447456 CALD1Q05682 793 aaKnown RBP12.11□□□□□ -0.47
CCDC18-205ENST00000447456 NEUROD2Q15784 382 aa12.11□□□□□ -0.47
CCDC18-205ENST00000447456 SEPT12Q8IYM1 358 aa12.11□□□□□ -0.47
CCDC18-205ENST00000447456 DDX54Q8TDD1 881 aaKnown RBP12.11□□□□□ -0.47
CCDC18-205ENST00000447456 RGS17Q9UGC6 210 aaPredicted RBP12.11□□□□□ -0.47
CCDC18-205ENST00000447456 PHKG2P15735 406 aa12.1□□□□□ -0.47
CCDC18-205ENST00000447456 CCDC27Q2M243 656 aa12.1□□□□□ -0.47
CCDC18-205ENST00000447456 THSD7AQ9UPZ6 1657 aa12.1□□□□□ -0.47
CCDC18-205ENST00000447456 POTEAQ6S8J7 498 aa12.09□□□□□ -0.47
CCDC18-205ENST00000447456 DCAF5Q96JK2 942 aa12.09□□□□□ -0.47
CCDC18-205ENST00000447456 RRP7AQ9Y3A4 280 aaKnown RBP12.09□□□□□ -0.47
CCDC18-205ENST00000447456 CYP27B1O15528 508 aa12.08□□□□□ -0.48
CCDC18-205ENST00000447456 NKX1-1Q15270 411 aaPredicted RBP12.08□□□□□ -0.48
CCDC18-205ENST00000447456 LRRC37A3O60309 1634 aa12.08□□□□□ -0.48
CCDC18-205ENST00000447456 SALL2Q9Y467 1007 aaPredicted RBP12.07□□□□□ -0.48
CCDC18-205ENST00000447456 TEFQ10587 303 aa12.06□□□□□ -0.48
CCDC18-205ENST00000447456 MPRIPQ6WCQ1 1025 aa12.06□□□□□ -0.48
CCDC18-205ENST00000447456 KRT27Q7Z3Y8 459 aa12.06□□□□□ -0.48
CCDC18-205ENST00000447456 WDR63Q8IWG1 891 aa12.06□□□□□ -0.48
CCDC18-205ENST00000447456 WWC1Q8IX03 1113 aa12.06□□□□□ -0.48
CCDC18-205ENST00000447456 YTHDC1Q96MU7 727 aaKnown RBP12.06□□□□□ -0.48
CCDC18-205ENST00000447456 TRIM35Q9UPQ4 493 aa12.06□□□□□ -0.48
CCDC18-205ENST00000447456 ZBED9Q6R2W3 1325 aa12.06□□□□□ -0.48
CCDC18-205ENST00000447456 ERVV-2B6SEH9 535 aa12.05□□□□□ -0.48
CCDC18-205ENST00000447456 RNMTO43148 476 aaKnown RBP12.05□□□□□ -0.48
CCDC18-205ENST00000447456 MARCH10Q8NA82 808 aaPredicted RBP12.05□□□□□ -0.48
CCDC18-205ENST00000447456 DLG5Q8TDM6 1919 aa12.05□□□□□ -0.48
CCDC18-205ENST00000447456 IL16Q14005 1332 aa12.05□□□□□ -0.48
CCDC18-205ENST00000447456 SHANK3Q9BYB0 1731 aa12.04□□□□□ -0.48
CCDC18-205ENST00000447456 CABP4P57796 275 aa12.04□□□□□ -0.48
CCDC18-205ENST00000447456 FAM196AQ6ZSG2 479 aa12.04□□□□□ -0.48
CCDC18-205ENST00000447456 MCM10Q7L590 875 aa12.04□□□□□ -0.48
CCDC18-205ENST00000447456 CEMIPQ8WUJ3 1361 aa12.04□□□□□ -0.48
CCDC18-205ENST00000447456 RGS12O14924 1447 aa12.03□□□□□ -0.48
CCDC18-205ENST00000447456 SENP3-EIF4A1A0A087X0R7 540 aa12.03□□□□□ -0.48
CCDC18-205ENST00000447456 GOLGA2Q08379 1002 aa12.03□□□□□ -0.48
CCDC18-205ENST00000447456 IL17REQ8NFR9 667 aa12.03□□□□□ -0.48
CCDC18-205ENST00000447456 BABAM1Q9NWV8 329 aa12.03□□□□□ -0.48
CCDC18-205ENST00000447456 BCL9O00512 1426 aa12.03□□□□□ -0.48
CCDC18-205ENST00000447456 GNAI1P63096 354 aa12.02□□□□□ -0.49
CCDC18-205ENST00000447456 DCTN1Q14203 1278 aa12.02□□□□□ -0.49
CCDC18-205ENST00000447456 TAF7Q15545 349 aaPredicted RBP12.02□□□□□ -0.49
CCDC18-205ENST00000447456 MYH16Q9H6N6 1097 aa12.02□□□□□ -0.49
CCDC18-205ENST00000447456 SLC52A2Q9HAB3 445 aa12.02□□□□□ -0.49
CCDC18-205ENST00000447456 LGR6Q9HBX8 967 aa12.02□□□□□ -0.49
CCDC18-205ENST00000447456 IFT57Q9NWB7 429 aa12.02□□□□□ -0.49
CCDC18-205ENST00000447456 TMOD3Q9NYL9 352 aa12.02□□□□□ -0.49
CCDC18-205ENST00000447456 KAT6BQ8WYB5 2073 aa12.02□□□□□ -0.49
CCDC18-205ENST00000447456 ZNF521Q96K83 1311 aa12.02□□□□□ -0.49
CCDC18-205ENST00000447456 SCN11AQ9UI33 1791 aa12.02□□□□□ -0.49
CCDC18-205ENST00000447456 KDM6AO15550 1401 aaPredicted RBP12.02□□□□□ -0.49
CCDC18-205ENST00000447456 E9PSI1 815 aa12.01□□□□□ -0.49
CCDC18-205ENST00000447456 THUMPD2Q9BTF0 503 aaKnown RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms