RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 BRINP3Q76B58 766 aa8.65□□□□□ -1.02
SDCBP-205ENST00000447267 PDZRN3Q9UPQ7 1066 aa8.65□□□□□ -1.02
SDCBP-205ENST00000447267 SHPRHQ149N8 1683 aa8.65□□□□□ -1.03
SDCBP-205ENST00000447267 NLRP1Q9C000 1473 aa8.64□□□□□ -1.03
SDCBP-205ENST00000447267 ATRNO75882 1429 aa8.64□□□□□ -1.03
SDCBP-205ENST00000447267 LAPTM4AQ15012 233 aa8.64□□□□□ -1.03
SDCBP-205ENST00000447267 FNBP4Q8N3X1 1017 aaPredicted RBP8.64□□□□□ -1.03
SDCBP-205ENST00000447267 ZNF777Q9ULD5 760 aaPredicted RBP8.64□□□□□ -1.03
SDCBP-205ENST00000447267 ZC3H13Q5T200 1668 aaKnown RBP8.64□□□□□ -1.03
SDCBP-205ENST00000447267 TULP1O00294 542 aaPredicted RBP8.63□□□□□ -1.03
SDCBP-205ENST00000447267 C14orf37Q86TY3 774 aa8.63□□□□□ -1.03
SDCBP-205ENST00000447267 LRRC59Q96AG4 307 aaKnown RBP8.63□□□□□ -1.03
SDCBP-205ENST00000447267 GJD4Q96KN9 370 aaPredicted RBP8.63□□□□□ -1.03
SDCBP-205ENST00000447267 FAM217BQ9NTX9 383 aaPredicted RBP8.63□□□□□ -1.03
SDCBP-205ENST00000447267 A2MP01023 1474 aa8.63□□□□□ -1.03
SDCBP-205ENST00000447267 WASHC2CQ9Y4E1 1318 aa8.62□□□□□ -1.03
SDCBP-205ENST00000447267 DIP2AQ14689 1571 aa8.62□□□□□ -1.03
SDCBP-205ENST00000447267 GDF9O60383 454 aa8.62□□□□□ -1.03
SDCBP-205ENST00000447267 ZMYND10O75800 440 aa8.62□□□□□ -1.03
SDCBP-205ENST00000447267 TRAF7Q6Q0C0 670 aa8.62□□□□□ -1.03
SDCBP-205ENST00000447267 BARGINQ6ZT62 677 aa8.62□□□□□ -1.03
SDCBP-205ENST00000447267 ZNF598Q86UK7 904 aaKnown RBP8.62□□□□□ -1.03
SDCBP-205ENST00000447267 TNS4Q8IZW8 715 aa8.62□□□□□ -1.03
SDCBP-205ENST00000447267 ZC3H15Q8WU90 426 aaKnown RBP8.62□□□□□ -1.03
SDCBP-205ENST00000447267 EID1Q9Y6B2 187 aa8.62□□□□□ -1.03
SDCBP-205ENST00000447267 PRDM15P57071 1507 aaPredicted RBP8.61□□□□□ -1.03
SDCBP-205ENST00000447267 FMNL1O95466 1100 aaPredicted RBP8.61□□□□□ -1.03
SDCBP-205ENST00000447267 GUCA2AQ02747 115 aa8.61□□□□□ -1.03
SDCBP-205ENST00000447267 ZNF697Q5TEC3 545 aa8.61□□□□□ -1.03
SDCBP-205ENST00000447267 FCF1Q9Y324 198 aaKnown RBP8.61□□□□□ -1.03
SDCBP-205ENST00000447267 SALL2Q9Y467 1007 aaPredicted RBP8.61□□□□□ -1.03
SDCBP-205ENST00000447267 PZPP20742 1482 aa8.61□□□□□ -1.03
SDCBP-205ENST00000447267 PNPLA6Q8IY17 1366 aa8.61□□□□□ -1.03
SDCBP-205ENST00000447267 NCOA2Q15596 1464 aa8.6□□□□□ -1.03
SDCBP-205ENST00000447267 KIF3BO15066 747 aa8.6□□□□□ -1.03
SDCBP-205ENST00000447267 KDM4AO75164 1064 aa8.6□□□□□ -1.03
SDCBP-205ENST00000447267 ATF3P18847 181 aa8.6□□□□□ -1.03
SDCBP-205ENST00000447267 EZH2Q15910 746 aaKnown RBP8.6□□□□□ -1.03
SDCBP-205ENST00000447267 GPCPD1Q9NPB8 672 aa8.6□□□□□ -1.03
SDCBP-205ENST00000447267 PKD2L1Q9P0L9 805 aa8.6□□□□□ -1.03
SDCBP-205ENST00000447267 AHDC1Q5TGY3 1603 aaPredicted RBP8.6□□□□□ -1.03
SDCBP-205ENST00000447267 CAMTA1Q9Y6Y1 1673 aa8.59□□□□□ -1.03
SDCBP-205ENST00000447267 HOXA2O43364 376 aa8.59□□□□□ -1.03
SDCBP-205ENST00000447267 SEPT12Q8IYM1 358 aa8.59□□□□□ -1.03
SDCBP-205ENST00000447267 SETD5Q9C0A6 1442 aa8.59□□□□□ -1.03
SDCBP-205ENST00000447267 TIAM1Q13009 1591 aa8.58□□□□□ -1.04
SDCBP-205ENST00000447267 TNFRSF10AO00220 468 aa8.58□□□□□ -1.04
SDCBP-205ENST00000447267 PRR20EP86478 221 aa8.58□□□□□ -1.04
SDCBP-205ENST00000447267 PRR20CP86479 221 aa8.58□□□□□ -1.04
SDCBP-205ENST00000447267 PRR20DP86480 221 aa8.58□□□□□ -1.04
SDCBP-205ENST00000447267 PRR20BP86481 221 aa8.58□□□□□ -1.04
SDCBP-205ENST00000447267 PRR20AP86496 221 aa8.58□□□□□ -1.04
SDCBP-205ENST00000447267 MSS51Q4VC12 460 aa8.58□□□□□ -1.04
SDCBP-205ENST00000447267 SPON1Q9HCB6 807 aa8.58□□□□□ -1.04
SDCBP-205ENST00000447267 NINLQ9Y2I6 1382 aa8.58□□□□□ -1.04
SDCBP-205ENST00000447267 MYO5CQ9NQX4 1742 aa8.57□□□□□ -1.04
SDCBP-205ENST00000447267 SAMD9LQ8IVG5 1584 aa8.57□□□□□ -1.04
SDCBP-205ENST00000447267 KCNQ2O43526 872 aa8.57□□□□□ -1.04
SDCBP-205ENST00000447267 HSPA6P17066 643 aa8.57□□□□□ -1.04
SDCBP-205ENST00000447267 CLCN1P35523 988 aa8.57□□□□□ -1.04
SDCBP-205ENST00000447267 BCANQ96GW7 911 aa8.57□□□□□ -1.04
SDCBP-205ENST00000447267 KIF14Q15058 1648 aa8.56□□□□□ -1.04
SDCBP-205ENST00000447267 SYMPKQ92797 1274 aaKnown RBP8.56□□□□□ -1.04
SDCBP-205ENST00000447267 ADGBQ8N7X0 1667 aa8.56□□□□□ -1.04
SDCBP-205ENST00000447267 MMP16P51512 607 aa8.55□□□□□ -1.04
SDCBP-205ENST00000447267 KRT27Q7Z3Y8 459 aa8.55□□□□□ -1.04
SDCBP-205ENST00000447267 C19orf44Q9H6X5 657 aa8.55□□□□□ -1.04
SDCBP-205ENST00000447267 CDK11AQ9UQ88 783 aaPredicted RBP8.55□□□□□ -1.04
SDCBP-205ENST00000447267 MAST1Q9Y2H9 1570 aa8.55□□□□□ -1.04
SDCBP-205ENST00000447267 PLXNC1O60486 1568 aa8.54□□□□□ -1.04
SDCBP-205ENST00000447267 DXOO77932 396 aaKnown RBP8.54□□□□□ -1.04
SDCBP-205ENST00000447267 FAM182BQ5T319 152 aa8.54□□□□□ -1.04
SDCBP-205ENST00000447267 PCDHGC3Q9UN70 934 aa8.54□□□□□ -1.04
SDCBP-205ENST00000447267 CAMSAP2Q08AD1 1489 aa8.53□□□□□ -1.04
SDCBP-205ENST00000447267 ARHGAP23Q9P227 1491 aa8.53□□□□□ -1.04
SDCBP-205ENST00000447267 SSTR3P32745 418 aaPredicted RBP8.53□□□□□ -1.04
SDCBP-205ENST00000447267 USP46P62068 366 aa8.53□□□□□ -1.04
SDCBP-205ENST00000447267 FOXC1Q12948 553 aa8.53□□□□□ -1.04
SDCBP-205ENST00000447267 AMHR2Q16671 573 aa8.53□□□□□ -1.04
SDCBP-205ENST00000447267 GRIPAP1Q4V328 841 aa8.53□□□□□ -1.04
SDCBP-205ENST00000447267 KRI1Q8N9T8 703 aaKnown RBP8.53□□□□□ -1.04
SDCBP-205ENST00000447267 USB1Q9BQ65 265 aaKnown RBP8.53□□□□□ -1.04
SDCBP-205ENST00000447267 ABCC3O15438 1527 aa8.53□□□□□ -1.04
SDCBP-205ENST00000447267 SAMD9Q5K651 1589 aa8.52□□□□□ -1.04
SDCBP-205ENST00000447267 RPIAP49247 311 aa8.52□□□□□ -1.05
SDCBP-205ENST00000447267 MYT1Q01538 1121 aa8.52□□□□□ -1.05
SDCBP-205ENST00000447267 Q3C1V9 767 aa8.52□□□□□ -1.05
SDCBP-205ENST00000447267 GIGYF2Q6Y7W6 1299 aaKnown RBP8.51□□□□□ -1.05
SDCBP-205ENST00000447267 SPIRE2Q8WWL2 714 aa8.51□□□□□ -1.05
SDCBP-205ENST00000447267 CAMKK2Q96RR4 588 aa8.51□□□□□ -1.05
SDCBP-205ENST00000447267 NKTRP30414 1462 aaKnown RBP8.51□□□□□ -1.05
SDCBP-205ENST00000447267 RALGAPBQ86X10 1494 aa8.51□□□□□ -1.05
SDCBP-205ENST00000447267 KDM5AP29375 1690 aaKnown RBP8.5□□□□□ -1.05
SDCBP-205ENST00000447267 FAM83GA6ND36 823 aa8.5□□□□□ -1.05
SDCBP-205ENST00000447267 PARP9Q8IXQ6 854 aa8.5□□□□□ -1.05
SDCBP-205ENST00000447267 DNAJC5GQ8N7S2 189 aa8.5□□□□□ -1.05
SDCBP-205ENST00000447267 SLIT1O75093 1534 aa8.49□□□□□ -1.05
SDCBP-205ENST00000447267 DHX29Q7Z478 1369 aaKnown RBP8.49□□□□□ -1.05
SDCBP-205ENST00000447267 TMEM2Q9UHN6 1383 aa8.49□□□□□ -1.05
SDCBP-205ENST00000447267 TROQ12816 1431 aaPredicted RBP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms