RNA–Protein interactions for RNA: ENST00000446836.5

CCDC12-203, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-203ENST00000446836 U2SURPO15042 1029 aaKnown RBP14.55□□□□□ -0.08
CCDC12-203ENST00000446836 ZCRB1Q8TBF4 217 aaKnown RBP14.55□□□□□ -0.08
CCDC12-203ENST00000446836 SPG7Q9UQ90 795 aa14.55□□□□□ -0.08
CCDC12-203ENST00000446836 AMOTQ4VCS5 1084 aa14.54□□□□□ -0.08
CCDC12-203ENST00000446836 BCL9O00512 1426 aa14.54□□□□□ -0.08
CCDC12-203ENST00000446836 PKD1L3Q7Z443 1732 aa14.54□□□□□ -0.08
CCDC12-203ENST00000446836 PCDH11XQ9BZA7 1347 aa14.53□□□□□ -0.08
CCDC12-203ENST00000446836 PCDH11YQ9BZA8 1340 aa14.53□□□□□ -0.08
CCDC12-203ENST00000446836 U2AF1L5P0DN76 240 aaPredicted RBP14.53□□□□□ -0.08
CCDC12-203ENST00000446836 U2AF1Q01081 240 aaKnown RBP eCLIP14.53□□□□□ -0.08
CCDC12-203ENST00000446836 FAM196AQ6ZSG2 479 aa14.53□□□□□ -0.08
CCDC12-203ENST00000446836 PNNQ9H307 717 aaKnown RBP14.53□□□□□ -0.08
CCDC12-203ENST00000446836 FCHSD2O94868 740 aa14.52□□□□□ -0.09
CCDC12-203ENST00000446836 PLEKHO1Q53GL0 409 aaPredicted RBP14.52□□□□□ -0.09
CCDC12-203ENST00000446836 AEBP1Q8IUX7 1158 aa14.52□□□□□ -0.09
CCDC12-203ENST00000446836 HMOX1P09601 288 aa14.51□□□□□ -0.09
CCDC12-203ENST00000446836 DIEXFQ68CQ4 756 aaKnown RBP14.51□□□□□ -0.09
CCDC12-203ENST00000446836 SHANK3Q9BYB0 1731 aa14.5□□□□□ -0.09
CCDC12-203ENST00000446836 MARCH10Q8NA82 808 aaPredicted RBP14.5□□□□□ -0.09
CCDC12-203ENST00000446836 NEFMP07197 916 aa14.49□□□□□ -0.09
CCDC12-203ENST00000446836 WDR43Q15061 677 aaKnown RBP eCLIP14.49□□□□□ -0.09
CCDC12-203ENST00000446836 CCDC125Q86Z20 511 aa14.49□□□□□ -0.09
CCDC12-203ENST00000446836 IFNL2Q8IZJ0 200 aa14.49□□□□□ -0.09
CCDC12-203ENST00000446836 DDX54Q8TDD1 881 aaKnown RBP14.49□□□□□ -0.09
CCDC12-203ENST00000446836 RSPH6AQ9H0K4 717 aa14.49□□□□□ -0.09
CCDC12-203ENST00000446836 HSP90AB1P08238 724 aaKnown RBP14.48□□□□□ -0.09
CCDC12-203ENST00000446836 PRKAR2BP31323 418 aa14.47□□□□□ -0.09
CCDC12-203ENST00000446836 NKX1-1Q15270 411 aaPredicted RBP14.47□□□□□ -0.09
CCDC12-203ENST00000446836 GAS2L2Q8NHY3 880 aa14.47□□□□□ -0.09
CCDC12-203ENST00000446836 MRS2Q9HD23 443 aa14.47□□□□□ -0.09
CCDC12-203ENST00000446836 CYP27B1O15528 508 aa14.46□□□□□ -0.09
CCDC12-203ENST00000446836 PHKG2P15735 406 aa14.46□□□□□ -0.09
CCDC12-203ENST00000446836 C1orf141Q5JVX7 400 aa14.46□□□□□ -0.09
CCDC12-203ENST00000446836 ZNF530Q6P9A1 599 aaPredicted RBP14.46□□□□□ -0.09
CCDC12-203ENST00000446836 FAM182BQ5T319 152 aa14.45□□□□□ -0.1
CCDC12-203ENST00000446836 SBF2Q86WG5 1849 aa14.45□□□□□ -0.1
CCDC12-203ENST00000446836 EP400Q96L91 3159 aa14.44□□□□□ -0.1
CCDC12-203ENST00000446836 CCER2I3L3R5 266 aa14.44□□□□□ -0.1
CCDC12-203ENST00000446836 SOCS7O14512 581 aa14.44□□□□□ -0.1
CCDC12-203ENST00000446836 SF3B2Q13435 895 aaKnown RBP14.44□□□□□ -0.1
CCDC12-203ENST00000446836 AKAP4Q5JQC9 854 aa14.44□□□□□ -0.1
CCDC12-203ENST00000446836 MAPK8IP3Q9UPT6 1336 aa14.43□□□□□ -0.1
CCDC12-203ENST00000446836 NHSQ6T4R5 1651 aa14.43□□□□□ -0.1
CCDC12-203ENST00000446836 MTHFSDQ2M296 383 aaKnown RBP14.43□□□□□ -0.1
CCDC12-203ENST00000446836 UPF1Q92900 1129 aaKnown RBP eCLIP14.43□□□□□ -0.1
CCDC12-203ENST00000446836 DCAF5Q96JK2 942 aa14.43□□□□□ -0.1
CCDC12-203ENST00000446836 PLEKHF1Q96S99 279 aa14.43□□□□□ -0.1
CCDC12-203ENST00000446836 BCL11BQ9C0K0 894 aaPredicted RBP14.43□□□□□ -0.1
CCDC12-203ENST00000446836 PNISRQ8TF01 805 aaKnown RBP14.42□□□□□ -0.1
CCDC12-203ENST00000446836 ADAMTS8Q9UP79 889 aa14.42□□□□□ -0.1
CCDC12-203ENST00000446836 DOT1LQ8TEK3 1739 aa14.41□□□□□ -0.1
CCDC12-203ENST00000446836 TRIM37O94972 964 aa14.41□□□□□ -0.1
CCDC12-203ENST00000446836 CCDC184Q52MB2 194 aa14.41□□□□□ -0.1
CCDC12-203ENST00000446836 RUNDC1Q96C34 613 aa14.41□□□□□ -0.1
CCDC12-203ENST00000446836 PHACTR3Q96KR7 559 aa14.41□□□□□ -0.1
CCDC12-203ENST00000446836 MAP3K5Q99683 1374 aa14.4□□□□□ -0.1
CCDC12-203ENST00000446836 GNAT3A8MTJ3 354 aa14.4□□□□□ -0.1
CCDC12-203ENST00000446836 ERVV-2B6SEH9 535 aa14.4□□□□□ -0.1
CCDC12-203ENST00000446836 HTATSF1O43719 755 aaKnown RBP14.4□□□□□ -0.1
CCDC12-203ENST00000446836 TNS1Q9HBL0 1735 aaKnown RBP14.4□□□□□ -0.1
CCDC12-203ENST00000446836 KAT6BQ8WYB5 2073 aa14.39□□□□□ -0.11
CCDC12-203ENST00000446836 BAG6P46379 1132 aa14.39□□□□□ -0.11
CCDC12-203ENST00000446836 ADAMTS7Q9UKP4 1686 aa14.39□□□□□ -0.11
CCDC12-203ENST00000446836 SCN11AQ9UI33 1791 aa14.38□□□□□ -0.11
CCDC12-203ENST00000446836 PRIM1P49642 420 aaKnown RBP14.38□□□□□ -0.11
CCDC12-203ENST00000446836 NFE2L2Q16236 605 aa14.38□□□□□ -0.11
CCDC12-203ENST00000446836 ACSBG1Q96GR2 724 aa14.38□□□□□ -0.11
CCDC12-203ENST00000446836 KDM6AO15550 1401 aaPredicted RBP14.38□□□□□ -0.11
CCDC12-203ENST00000446836 TOGARAM1Q9Y4F4 1720 aa14.38□□□□□ -0.11
CCDC12-203ENST00000446836 RGPD3A6NKT7 1758 aaPredicted RBP14.37□□□□□ -0.11
CCDC12-203ENST00000446836 RGPD4Q7Z3J3 1758 aa14.37□□□□□ -0.11
CCDC12-203ENST00000446836 ITGB4P16144 1822 aa14.37□□□□□ -0.11
CCDC12-203ENST00000446836 PLSCR1O15162 318 aa14.37□□□□□ -0.11
CCDC12-203ENST00000446836 LMOD3Q0VAK6 560 aa14.37□□□□□ -0.11
CCDC12-203ENST00000446836 MPRIPQ6WCQ1 1025 aa14.37□□□□□ -0.11
CCDC12-203ENST00000446836 RTF1Q92541 710 aaKnown RBP14.37□□□□□ -0.11
CCDC12-203ENST00000446836 SYTL4Q96C24 671 aaPredicted RBP14.37□□□□□ -0.11
CCDC12-203ENST00000446836 TMOD3Q9NYL9 352 aa14.37□□□□□ -0.11
CCDC12-203ENST00000446836 RNMTO43148 476 aaKnown RBP14.36□□□□□ -0.11
CCDC12-203ENST00000446836 KCNQ2O43526 872 aa14.36□□□□□ -0.11
CCDC12-203ENST00000446836 APBA3O96018 575 aa14.36□□□□□ -0.11
CCDC12-203ENST00000446836 MRC1P22897 1456 aa14.36□□□□□ -0.11
CCDC12-203ENST00000446836 BTAF1O14981 1849 aa14.36□□□□□ -0.11
CCDC12-203ENST00000446836 HMGB2P26583 209 aaKnown RBP14.35□□□□□ -0.11
CCDC12-203ENST00000446836 CABP4P57796 275 aa14.35□□□□□ -0.11
CCDC12-203ENST00000446836 CCDC146Q8IYE0 955 aa14.35□□□□□ -0.11
CCDC12-203ENST00000446836 MIER1Q8N108 512 aa14.35□□□□□ -0.11
CCDC12-203ENST00000446836 VIRMAQ69YN4 1812 aaKnown RBP14.35□□□□□ -0.11
CCDC12-203ENST00000446836 CEMIPQ8WUJ3 1361 aa14.34□□□□□ -0.11
CCDC12-203ENST00000446836 TMPOP42166 694 aaKnown RBP14.34□□□□□ -0.11
CCDC12-203ENST00000446836 NCBP3Q53F19 620 aaKnown RBP14.34□□□□□ -0.11
CCDC12-203ENST00000446836 SMARCC1Q92922 1105 aaPredicted RBP14.34□□□□□ -0.11
CCDC12-203ENST00000446836 SLC52A2Q9HAB3 445 aa14.34□□□□□ -0.11
CCDC12-203ENST00000446836 DLG5Q8TDM6 1919 aa14.34□□□□□ -0.11
CCDC12-203ENST00000446836 RIPK4P57078 832 aa14.33□□□□□ -0.12
CCDC12-203ENST00000446836 TEFQ10587 303 aa14.33□□□□□ -0.12
CCDC12-203ENST00000446836 IL17REQ8NFR9 667 aa14.33□□□□□ -0.12
CCDC12-203ENST00000446836 PIGBQ92521 554 aa14.33□□□□□ -0.12
CCDC12-203ENST00000446836 LGR6Q9HBX8 967 aa14.33□□□□□ -0.12
CCDC12-203ENST00000446836 PTF1AQ7RTS3 328 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms