RNA–Protein interactions for RNA: ENST00000446593.1

LINC01880-201, Transcript of long intergenic non-protein coding RNA 1880, humanhuman

TSL 4 BASIC

Gene LINC01880, Length 561 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01880-201ENST00000446593 CRYBG1Q9Y4K1 1723 aa8.45□□□□□ -1.06
LINC01880-201ENST00000446593 POTEFA5A3E0 1075 aa8.44□□□□□ -1.06
LINC01880-201ENST00000446593 ARHGEF25Q86VW2 580 aa8.44□□□□□ -1.06
LINC01880-201ENST00000446593 ACSBG1Q96GR2 724 aa8.44□□□□□ -1.06
LINC01880-201ENST00000446593 CABP2Q9NPB3 220 aa8.44□□□□□ -1.06
LINC01880-201ENST00000446593 PPIP5K1Q6PFW1 1433 aa8.44□□□□□ -1.06
LINC01880-201ENST00000446593 PHRF1Q9P1Y6 1649 aaKnown RBP8.43□□□□□ -1.06
LINC01880-201ENST00000446593 LMO7Q8WWI1 1683 aa8.43□□□□□ -1.06
LINC01880-201ENST00000446593 TFCP2L1Q9NZI6 479 aa8.43□□□□□ -1.06
LINC01880-201ENST00000446593 CCDC7Q96M83 1385 aa8.43□□□□□ -1.06
LINC01880-201ENST00000446593 PARP4Q9UKK3 1724 aaKnown RBP8.43□□□□□ -1.06
LINC01880-201ENST00000446593 CASZ1Q86V15 1759 aa8.43□□□□□ -1.06
LINC01880-201ENST00000446593 SOX12O15370 315 aa8.42□□□□□ -1.06
LINC01880-201ENST00000446593 SLC27A3Q5K4L6 730 aa8.42□□□□□ -1.06
LINC01880-201ENST00000446593 GPBP1L1Q9HC44 474 aaPredicted RBP8.42□□□□□ -1.06
LINC01880-201ENST00000446593 MYOM1P52179 1685 aa8.42□□□□□ -1.06
LINC01880-201ENST00000446593 RGPD3A6NKT7 1758 aaPredicted RBP8.42□□□□□ -1.06
LINC01880-201ENST00000446593 RGPD4Q7Z3J3 1758 aa8.42□□□□□ -1.06
LINC01880-201ENST00000446593 PEAK1Q9H792 1746 aa8.41□□□□□ -1.06
LINC01880-201ENST00000446593 USP6P35125 1406 aa8.41□□□□□ -1.06
LINC01880-201ENST00000446593 CENPJQ9HC77 1338 aaPredicted RBP8.41□□□□□ -1.06
LINC01880-201ENST00000446593 IL2RBP14784 551 aa8.41□□□□□ -1.06
LINC01880-201ENST00000446593 HSPA6P17066 643 aa8.41□□□□□ -1.06
LINC01880-201ENST00000446593 ZNF827Q17R98 1081 aa8.41□□□□□ -1.06
LINC01880-201ENST00000446593 LRRC4BQ9NT99 713 aa8.41□□□□□ -1.06
LINC01880-201ENST00000446593 NLRP2Q9NX02 1062 aa8.41□□□□□ -1.06
LINC01880-201ENST00000446593 CPSF1Q10570 1443 aaKnown RBP8.4□□□□□ -1.06
LINC01880-201ENST00000446593 NLGN2Q8NFZ4 835 aa8.4□□□□□ -1.06
LINC01880-201ENST00000446593 ITSN1Q15811 1721 aa8.4□□□□□ -1.07
LINC01880-201ENST00000446593 TTC21BQ7Z4L5 1316 aa8.39□□□□□ -1.07
LINC01880-201ENST00000446593 TTC21AQ8NDW8 1320 aa8.39□□□□□ -1.07
LINC01880-201ENST00000446593 HMGB2P26583 209 aaKnown RBP8.39□□□□□ -1.07
LINC01880-201ENST00000446593 NBPF1Q3BBV0 1214 aa8.39□□□□□ -1.07
LINC01880-201ENST00000446593 LRRC37A3O60309 1634 aa8.39□□□□□ -1.07
LINC01880-201ENST00000446593 PNPLA7Q6ZV29 1317 aa8.38□□□□□ -1.07
LINC01880-201ENST00000446593 EVC2Q86UK5 1308 aa8.38□□□□□ -1.07
LINC01880-201ENST00000446593 ZBTB22O15209 634 aa8.38□□□□□ -1.07
LINC01880-201ENST00000446593 YBX3P16989 372 aaKnown RBP eCLIP8.38□□□□□ -1.07
LINC01880-201ENST00000446593 SYTL4Q96C24 671 aaPredicted RBP8.38□□□□□ -1.07
LINC01880-201ENST00000446593 SLIT3O75094 1523 aa8.38□□□□□ -1.07
LINC01880-201ENST00000446593 TNS2Q63HR2 1409 aa8.37□□□□□ -1.07
LINC01880-201ENST00000446593 RAB3GAP2Q9H2M9 1393 aa8.37□□□□□ -1.07
LINC01880-201ENST00000446593 DDX54Q8TDD1 881 aaKnown RBP8.37□□□□□ -1.07
LINC01880-201ENST00000446593 ATP10DQ9P241 1426 aa8.37□□□□□ -1.07
LINC01880-201ENST00000446593 GOLGB1Q14789 3259 aaKnown RBP8.36□□□□□ -1.07
LINC01880-201ENST00000446593 ERBB3P21860 1342 aa8.36□□□□□ -1.07
LINC01880-201ENST00000446593 ZNF526Q8TF50 670 aaPredicted RBP8.36□□□□□ -1.07
LINC01880-201ENST00000446593 CD2APQ9Y5K6 639 aa8.36□□□□□ -1.07
LINC01880-201ENST00000446593 PRIM1P49642 420 aaKnown RBP8.35□□□□□ -1.07
LINC01880-201ENST00000446593 APLP1P51693 650 aa8.35□□□□□ -1.07
LINC01880-201ENST00000446593 ANKRD24Q8TF21 1146 aa8.35□□□□□ -1.07
LINC01880-201ENST00000446593 TOPAZ1Q8N9V7 1692 aa8.34□□□□□ -1.07
LINC01880-201ENST00000446593 KCNQ4P56696 695 aa8.34□□□□□ -1.07
LINC01880-201ENST00000446593 COL23A1Q86Y22 540 aaPredicted RBP8.34□□□□□ -1.07
LINC01880-201ENST00000446593 FLAD1Q8NFF5 587 aa8.34□□□□□ -1.07
LINC01880-201ENST00000446593 TMEM121BQ9BXQ6 578 aaPredicted RBP8.34□□□□□ -1.07
LINC01880-201ENST00000446593 CCNL1Q9UK58 526 aaPredicted RBP8.34□□□□□ -1.07
LINC01880-201ENST00000446593 CHD4Q14839 1912 aa8.34□□□□□ -1.07
LINC01880-201ENST00000446593 KTN1Q86UP2 1357 aaKnown RBP8.34□□□□□ -1.07
LINC01880-201ENST00000446593 SBF2Q86WG5 1849 aa8.33□□□□□ -1.08
LINC01880-201ENST00000446593 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.33□□□□□ -1.08
LINC01880-201ENST00000446593 ARHGEF28Q8N1W1 1705 aaKnown RBP8.33□□□□□ -1.08
LINC01880-201ENST00000446593 SLAIN1Q8ND83 568 aa8.33□□□□□ -1.08
LINC01880-201ENST00000446593 SEC24BO95487 1268 aa8.32□□□□□ -1.08
LINC01880-201ENST00000446593 MSL1Q68DK7 614 aa8.32□□□□□ -1.08
LINC01880-201ENST00000446593 ABCC6O95255 1503 aa8.32□□□□□ -1.08
LINC01880-201ENST00000446593 ANKRD36BQ8N2N9 1353 aa8.32□□□□□ -1.08
LINC01880-201ENST00000446593 ZCRB1Q8TBF4 217 aaKnown RBP8.31□□□□□ -1.08
LINC01880-201ENST00000446593 BMP2KQ9NSY1 1161 aaPredicted RBP8.31□□□□□ -1.08
LINC01880-201ENST00000446593 TRPM1Q7Z4N2 1603 aa8.31□□□□□ -1.08
LINC01880-201ENST00000446593 USP47Q96K76 1375 aa8.31□□□□□ -1.08
LINC01880-201ENST00000446593 SHANK3Q9BYB0 1731 aa8.31□□□□□ -1.08
LINC01880-201ENST00000446593 COL18A1P39060 1754 aa8.3□□□□□ -1.08
LINC01880-201ENST00000446593 PAPPAQ13219 1627 aa8.3□□□□□ -1.08
LINC01880-201ENST00000446593 TOMM70O94826 608 aa8.3□□□□□ -1.08
LINC01880-201ENST00000446593 HDGFL2Q7Z4V5 671 aaPredicted RBP8.3□□□□□ -1.08
LINC01880-201ENST00000446593 DNAJC5GQ8N7S2 189 aa8.3□□□□□ -1.08
LINC01880-201ENST00000446593 IP6K1Q92551 441 aa8.3□□□□□ -1.08
LINC01880-201ENST00000446593 COLQQ9Y215 455 aaPredicted RBP8.3□□□□□ -1.08
LINC01880-201ENST00000446593 ADCY9O60503 1353 aa8.3□□□□□ -1.08
LINC01880-201ENST00000446593 USP31Q70CQ4 1352 aa8.3□□□□□ -1.08
LINC01880-201ENST00000446593 NHSQ6T4R5 1651 aa8.3□□□□□ -1.08
LINC01880-201ENST00000446593 KIF3CO14782 793 aa8.29□□□□□ -1.08
LINC01880-201ENST00000446593 MNX1P50219 401 aaPredicted RBP8.29□□□□□ -1.08
LINC01880-201ENST00000446593 NME9Q86XW9 330 aa8.29□□□□□ -1.08
LINC01880-201ENST00000446593 LTV1Q96GA3 475 aaPredicted RBP8.29□□□□□ -1.08
LINC01880-201ENST00000446593 AKAP12Q02952 1782 aa8.29□□□□□ -1.08
LINC01880-201ENST00000446593 IGSF1Q8N6C5 1336 aa8.29□□□□□ -1.08
LINC01880-201ENST00000446593 TRIM26Q12899 539 aaPredicted RBP8.28□□□□□ -1.08
LINC01880-201ENST00000446593 TMC1Q8TDI8 760 aa8.28□□□□□ -1.08
LINC01880-201ENST00000446593 NFAT5O94916 1531 aa8.28□□□□□ -1.08
LINC01880-201ENST00000446593 PIK3C2AO00443 1686 aa8.27□□□□□ -1.08
LINC01880-201ENST00000446593 AMPHP49418 695 aa8.27□□□□□ -1.09
LINC01880-201ENST00000446593 C16orf71Q8IYS4 520 aaPredicted RBP8.27□□□□□ -1.09
LINC01880-201ENST00000446593 AK7Q96M32 723 aa8.27□□□□□ -1.09
LINC01880-201ENST00000446593 TERF2IPQ9NYB0 399 aa8.27□□□□□ -1.09
LINC01880-201ENST00000446593 CGNL1Q0VF96 1302 aa8.27□□□□□ -1.09
LINC01880-201ENST00000446593 TIE1P35590 1138 aa8.26□□□□□ -1.09
LINC01880-201ENST00000446593 RAPGEF4Q8WZA2 1011 aa8.26□□□□□ -1.09
LINC01880-201ENST00000446593 SMARCC1Q92922 1105 aaPredicted RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms