RNA–Protein interactions for RNA: ENST00000446054.1

HMGN2P11-201, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 11, humanhuman

BASIC

Gene HMGN2P11, Length 403 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P11-201ENST00000446054 PANK3Q9H999 370 aa15.16■□□□□ 0.02
HMGN2P11-201ENST00000446054 SHANK3Q9BYB0 1731 aa15.16■□□□□ 0.02
HMGN2P11-201ENST00000446054 PDGFDQ9GZP0 370 aaPredicted RBP15.15■□□□□ 0.02
HMGN2P11-201ENST00000446054 SMG6Q86US8 1419 aaKnown RBP15.15■□□□□ 0.02
HMGN2P11-201ENST00000446054 KIF24Q5T7B8 1368 aa15.14■□□□□ 0.01
HMGN2P11-201ENST00000446054 TNNT2P45379 298 aaPredicted RBP15.14■□□□□ 0.01
HMGN2P11-201ENST00000446054 PRIM1P49642 420 aaKnown RBP15.13■□□□□ 0.01
HMGN2P11-201ENST00000446054 RAPGEF4Q8WZA2 1011 aa15.13■□□□□ 0.01
HMGN2P11-201ENST00000446054 SYTL4Q96C24 671 aaPredicted RBP15.13■□□□□ 0.01
HMGN2P11-201ENST00000446054 POLKQ9UBT6 870 aa15.13■□□□□ 0.01
HMGN2P11-201ENST00000446054 TATP17735 454 aaPredicted RBP15.12■□□□□ 0.01
HMGN2P11-201ENST00000446054 STK32BQ9NY57 414 aa15.12■□□□□ 0.01
HMGN2P11-201ENST00000446054 WASHC2AQ641Q2 1341 aa15.12■□□□□ 0.01
HMGN2P11-201ENST00000446054 DOT1LQ8TEK3 1739 aa15.12■□□□□ 0.01
HMGN2P11-201ENST00000446054 ANKRD26Q9UPS8 1709 aa15.12■□□□□ 0.01
HMGN2P11-201ENST00000446054 SLC15A2Q16348 729 aa15.11■□□□□ 0.01
HMGN2P11-201ENST00000446054 SPON1Q9HCB6 807 aa15.11■□□□□ 0.01
HMGN2P11-201ENST00000446054 LRRC4BQ9NT99 713 aa15.11■□□□□ 0.01
HMGN2P11-201ENST00000446054 CASZ1Q86V15 1759 aa15.11■□□□□ 0.01
HMGN2P11-201ENST00000446054 KCNQ4P56696 695 aa15.09■□□□□ 0.01
HMGN2P11-201ENST00000446054 ZBTB7AO95365 584 aa15.08■□□□□ 0
HMGN2P11-201ENST00000446054 EYA1Q99502 592 aa15.08■□□□□ 0
HMGN2P11-201ENST00000446054 NSD2O96028 1365 aa15.08■□□□□ 0
HMGN2P11-201ENST00000446054 PAPPAQ13219 1627 aa15.07■□□□□ 0
HMGN2P11-201ENST00000446054 CYP27B1O15528 508 aa15.07■□□□□ 0
HMGN2P11-201ENST00000446054 ZNF827Q17R98 1081 aa15.07■□□□□ 0
HMGN2P11-201ENST00000446054 ATF5Q9Y2D1 282 aaPredicted RBP15.07■□□□□ 0
HMGN2P11-201ENST00000446054 KIF7Q2M1P5 1343 aa15.07■□□□□ 0
HMGN2P11-201ENST00000446054 EIF4A2Q14240 407 aaKnown RBP15.06■□□□□ 0
HMGN2P11-201ENST00000446054 PPP1R1BQ9UD71 204 aaPredicted RBP15.06■□□□□ 0
HMGN2P11-201ENST00000446054 PCDH11XQ9BZA7 1347 aa15.06■□□□□ 0
HMGN2P11-201ENST00000446054 PCDH11YQ9BZA8 1340 aa15.06■□□□□ 0
HMGN2P11-201ENST00000446054 NCAPD2Q15021 1401 aa15.06■□□□□ 0
HMGN2P11-201ENST00000446054 MORC1Q86VD1 984 aa15.05■□□□□ -0
HMGN2P11-201ENST00000446054 LY75O60449 1722 aa15.04■□□□□ -0
HMGN2P11-201ENST00000446054 PKD1L3Q7Z443 1732 aa15.04■□□□□ -0
HMGN2P11-201ENST00000446054 SLC27A3Q5K4L6 730 aa15.04■□□□□ -0
HMGN2P11-201ENST00000446054 KNSTRNQ9Y448 316 aa15.04■□□□□ -0
HMGN2P11-201ENST00000446054 PTGER2P43116 358 aa15.03■□□□□ -0
HMGN2P11-201ENST00000446054 AKT1S1Q96B36 256 aa15.03■□□□□ -0
HMGN2P11-201ENST00000446054 ITGB4P16144 1822 aa15.02■□□□□ -0
HMGN2P11-201ENST00000446054 MPRIPQ6WCQ1 1025 aa15.02■□□□□ -0
HMGN2P11-201ENST00000446054 SPG7Q9UQ90 795 aa15.02■□□□□ -0
HMGN2P11-201ENST00000446054 TOGARAM1Q9Y4F4 1720 aa15.02□□□□□ -0.01
HMGN2P11-201ENST00000446054 AMER1Q5JTC6 1135 aaPredicted RBP15.01□□□□□ -0.01
HMGN2P11-201ENST00000446054 MTFR1LQ9H019 292 aa15.01□□□□□ -0.01
HMGN2P11-201ENST00000446054 CCNL1Q9UK58 526 aaPredicted RBP15.01□□□□□ -0.01
HMGN2P11-201ENST00000446054 NKX1-1Q15270 411 aaPredicted RBP15□□□□□ -0.01
HMGN2P11-201ENST00000446054 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15□□□□□ -0.01
HMGN2P11-201ENST00000446054 TUBGCP6Q96RT7 1819 aa14.99□□□□□ -0.01
HMGN2P11-201ENST00000446054 IGSF1Q8N6C5 1336 aa14.99□□□□□ -0.01
HMGN2P11-201ENST00000446054 PER1O15534 1290 aaPredicted RBP14.99□□□□□ -0.01
HMGN2P11-201ENST00000446054 SGIP1Q9BQI5 828 aa14.99□□□□□ -0.01
HMGN2P11-201ENST00000446054 TFCP2L1Q9NZI6 479 aa14.99□□□□□ -0.01
HMGN2P11-201ENST00000446054 PNPLA7Q6ZV29 1317 aa14.98□□□□□ -0.01
HMGN2P11-201ENST00000446054 PHKG2P15735 406 aa14.98□□□□□ -0.01
HMGN2P11-201ENST00000446054 PIGBQ92521 554 aa14.98□□□□□ -0.01
HMGN2P11-201ENST00000446054 QSER1Q2KHR3 1735 aa14.97□□□□□ -0.01
HMGN2P11-201ENST00000446054 IFNL2Q8IZJ0 200 aa14.97□□□□□ -0.01
HMGN2P11-201ENST00000446054 PALLDQ8WX93 1383 aa14.97□□□□□ -0.01
HMGN2P11-201ENST00000446054 CC2D1BQ5T0F9 858 aaKnown RBP14.96□□□□□ -0.01
HMGN2P11-201ENST00000446054 AEBP1Q8IUX7 1158 aa14.96□□□□□ -0.01
HMGN2P11-201ENST00000446054 TAF1LQ8IZX4 1826 aa14.95□□□□□ -0.02
HMGN2P11-201ENST00000446054 CNGB1Q14028 1251 aaPredicted RBP14.95□□□□□ -0.02
HMGN2P11-201ENST00000446054 FHDC1Q9C0D6 1143 aaPredicted RBP14.95□□□□□ -0.02
HMGN2P11-201ENST00000446054 C5P01031 1676 aa14.94□□□□□ -0.02
HMGN2P11-201ENST00000446054 IL13P35225 146 aa14.94□□□□□ -0.02
HMGN2P11-201ENST00000446054 MTHFSP49914 203 aa14.94□□□□□ -0.02
HMGN2P11-201ENST00000446054 SULT6B1Q6IMI4 303 aa14.94□□□□□ -0.02
HMGN2P11-201ENST00000446054 SLC16A10Q8TF71 515 aa14.94□□□□□ -0.02
HMGN2P11-201ENST00000446054 SMARCC1Q92922 1105 aaPredicted RBP14.94□□□□□ -0.02
HMGN2P11-201ENST00000446054 ARXQ96QS3 562 aa14.94□□□□□ -0.02
HMGN2P11-201ENST00000446054 TMOD3Q9NYL9 352 aa14.94□□□□□ -0.02
HMGN2P11-201ENST00000446054 PLEKHO1Q53GL0 409 aaPredicted RBP14.93□□□□□ -0.02
HMGN2P11-201ENST00000446054 COL23A1Q86Y22 540 aaPredicted RBP14.93□□□□□ -0.02
HMGN2P11-201ENST00000446054 SYT17Q9BSW7 474 aa14.93□□□□□ -0.02
HMGN2P11-201ENST00000446054 ASAP1Q9ULH1 1129 aa14.93□□□□□ -0.02
HMGN2P11-201ENST00000446054 MSH5O43196 834 aa14.92□□□□□ -0.02
HMGN2P11-201ENST00000446054 ZNF530Q6P9A1 599 aaPredicted RBP14.91□□□□□ -0.02
HMGN2P11-201ENST00000446054 SMIM5Q71RC9 77 aa14.91□□□□□ -0.02
HMGN2P11-201ENST00000446054 ATG3Q9NT62 314 aa14.91□□□□□ -0.02
HMGN2P11-201ENST00000446054 COL24A1Q17RW2 1714 aa14.91□□□□□ -0.02
HMGN2P11-201ENST00000446054 PLEKHG2Q9H7P9 1386 aa14.9□□□□□ -0.02
HMGN2P11-201ENST00000446054 C4BP0C0L5 1744 aa14.9□□□□□ -0.02
HMGN2P11-201ENST00000446054 LOC102724428A0A0B4J2F2 783 aa14.9□□□□□ -0.02
HMGN2P11-201ENST00000446054 SIK1P57059 783 aa14.9□□□□□ -0.02
HMGN2P11-201ENST00000446054 AMOTQ4VCS5 1084 aa14.9□□□□□ -0.02
HMGN2P11-201ENST00000446054 DCAF5Q96JK2 942 aa14.9□□□□□ -0.02
HMGN2P11-201ENST00000446054 KDRP35968 1356 aa14.89□□□□□ -0.03
HMGN2P11-201ENST00000446054 DCAF8L1A6NGE4 600 aa14.89□□□□□ -0.03
HMGN2P11-201ENST00000446054 ERVV-2B6SEH9 535 aa14.89□□□□□ -0.03
HMGN2P11-201ENST00000446054 AMIGO3Q86WK7 504 aa14.89□□□□□ -0.03
HMGN2P11-201ENST00000446054 HSP90AB1P08238 724 aaKnown RBP14.88□□□□□ -0.03
HMGN2P11-201ENST00000446054 HMOX1P09601 288 aa14.88□□□□□ -0.03
HMGN2P11-201ENST00000446054 POLD1P28340 1107 aa14.88□□□□□ -0.03
HMGN2P11-201ENST00000446054 ITPK1Q13572 414 aa14.88□□□□□ -0.03
HMGN2P11-201ENST00000446054 MSL1Q68DK7 614 aa14.88□□□□□ -0.03
HMGN2P11-201ENST00000446054 KLHL34Q8N239 644 aa14.88□□□□□ -0.03
HMGN2P11-201ENST00000446054 LINC00116Q8NCU8 138 aa14.88□□□□□ -0.03
HMGN2P11-201ENST00000446054 AK7Q96M32 723 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms