RNA–Protein interactions for RNA: ENST00000445692.5

APLF-203, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 5

Gene APLF, Length 3,906 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-203ENST00000445692 PDCL2Q8N4E4 241 aa14.51□□□□□ -0.09
APLF-203ENST00000445692 FCHSD2O94868 740 aa14.5□□□□□ -0.09
APLF-203ENST00000445692 ERICH4A6NGS2 130 aa14.5□□□□□ -0.09
APLF-203ENST00000445692 RBM25P49756 843 aaKnown RBP14.5□□□□□ -0.09
APLF-203ENST00000445692 LRSAM1Q6UWE0 723 aa14.5□□□□□ -0.09
APLF-203ENST00000445692 NOS1P29475 1434 aa14.5□□□□□ -0.09
APLF-203ENST00000445692 GCC2Q8IWJ2 1684 aa14.5□□□□□ -0.09
APLF-203ENST00000445692 UBTFL1P0CB47 393 aaPredicted RBP14.5□□□□□ -0.09
APLF-203ENST00000445692 C16orf45Q96MC5 204 aaPredicted RBP14.5□□□□□ -0.09
APLF-203ENST00000445692 ZNF330Q9Y3S2 320 aaPredicted RBP14.5□□□□□ -0.09
APLF-203ENST00000445692 PIK3C2GO75747 1445 aa14.5□□□□□ -0.09
APLF-203ENST00000445692 PREX2Q70Z35 1606 aa14.5□□□□□ -0.09
APLF-203ENST00000445692 SIGLEC1Q9BZZ2 1709 aa14.5□□□□□ -0.09
APLF-203ENST00000445692 RAPGEF3O95398 923 aa14.49□□□□□ -0.09
APLF-203ENST00000445692 FAM184AQ8NB25 1140 aa14.49□□□□□ -0.09
APLF-203ENST00000445692 LRRCC1Q9C099 1032 aa14.49□□□□□ -0.09
APLF-203ENST00000445692 TRIM35Q9UPQ4 493 aa14.49□□□□□ -0.09
APLF-203ENST00000445692 FYB1O15117 783 aa14.49□□□□□ -0.09
APLF-203ENST00000445692 FILIP1Q7Z7B0 1213 aa14.49□□□□□ -0.09
APLF-203ENST00000445692 PLEKHM2Q8IWE5 1019 aa14.49□□□□□ -0.09
APLF-203ENST00000445692 TMEM63CQ9P1W3 806 aa14.49□□□□□ -0.09
APLF-203ENST00000445692 GNAI2P04899 355 aa14.49□□□□□ -0.09
APLF-203ENST00000445692 SPG7Q9UQ90 795 aa14.49□□□□□ -0.09
APLF-203ENST00000445692 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.49□□□□□ -0.09
APLF-203ENST00000445692 NRDCO43847 1150 aa14.48□□□□□ -0.09
APLF-203ENST00000445692 WDR33Q9C0J8 1336 aaKnown RBP14.48□□□□□ -0.09
APLF-203ENST00000445692 HMGN5P82970 282 aaKnown RBP14.48□□□□□ -0.09
APLF-203ENST00000445692 MTERF4Q7Z6M4 381 aaKnown RBP14.48□□□□□ -0.09
APLF-203ENST00000445692 PLCD3Q8N3E9 789 aa14.48□□□□□ -0.09
APLF-203ENST00000445692 TCEANC2Q96MN5 208 aa14.48□□□□□ -0.09
APLF-203ENST00000445692 CNPY2Q9Y2B0 182 aa14.48□□□□□ -0.09
APLF-203ENST00000445692 ZKSCAN1P17029 563 aaPredicted RBP14.48□□□□□ -0.09
APLF-203ENST00000445692 AIMP1Q12904 312 aaKnown RBP14.48□□□□□ -0.09
APLF-203ENST00000445692 SF3A1Q15459 793 aaKnown RBP14.48□□□□□ -0.09
APLF-203ENST00000445692 C9orf78Q9NZ63 289 aaPredicted RBP14.48□□□□□ -0.09
APLF-203ENST00000445692 TFIP11Q9UBB9 837 aaKnown RBP14.48□□□□□ -0.09
APLF-203ENST00000445692 POLR3AO14802 1390 aaPredicted RBP14.48□□□□□ -0.09
APLF-203ENST00000445692 SAMD9LQ8IVG5 1584 aa14.48□□□□□ -0.09
APLF-203ENST00000445692 ZBTB7BO15156 539 aaPredicted RBP14.47□□□□□ -0.09
APLF-203ENST00000445692 ALDH1L2Q3SY69 923 aa14.47□□□□□ -0.09
APLF-203ENST00000445692 FANCAO15360 1455 aa14.47□□□□□ -0.09
APLF-203ENST00000445692 IFIT2P09913 472 aaKnown RBP14.47□□□□□ -0.09
APLF-203ENST00000445692 GNL2Q13823 731 aaKnown RBP14.47□□□□□ -0.09
APLF-203ENST00000445692 CREBRFQ8IUR6 639 aa14.47□□□□□ -0.09
APLF-203ENST00000445692 PLCH2O75038 1416 aa14.47□□□□□ -0.09
APLF-203ENST00000445692 VAMP4O75379 141 aa14.47□□□□□ -0.09
APLF-203ENST00000445692 CPA1P15085 419 aa14.47□□□□□ -0.09
APLF-203ENST00000445692 USP48Q86UV5 1035 aa14.47□□□□□ -0.09
APLF-203ENST00000445692 LMBRD1Q9NUN5 540 aa14.47□□□□□ -0.09
APLF-203ENST00000445692 CGNQ9P2M7 1197 aaKnown RBP14.47□□□□□ -0.09
APLF-203ENST00000445692 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.47□□□□□ -0.09
APLF-203ENST00000445692 V9GYY5 206 aaPredicted RBP14.47□□□□□ -0.09
APLF-203ENST00000445692 HOMER1Q86YM7 354 aa14.46□□□□□ -0.09
APLF-203ENST00000445692 MRPL50Q8N5N7 158 aaKnown RBP14.46□□□□□ -0.09
APLF-203ENST00000445692 JAKMIP1Q96N16 626 aaKnown RBP14.46□□□□□ -0.09
APLF-203ENST00000445692 GADD45BO75293 160 aaPredicted RBP14.46□□□□□ -0.09
APLF-203ENST00000445692 RICTORQ6R327 1708 aa14.46□□□□□ -0.1
APLF-203ENST00000445692 CASTP20810 708 aaKnown RBP14.46□□□□□ -0.1
APLF-203ENST00000445692 NOLC1Q14978 699 aaKnown RBP eCLIP14.45□□□□□ -0.1
APLF-203ENST00000445692 AEBP1Q8IUX7 1158 aa14.45□□□□□ -0.1
APLF-203ENST00000445692 RPAP2Q8IXW5 612 aaPredicted RBP14.45□□□□□ -0.1
APLF-203ENST00000445692 USP26Q9BXU7 913 aa14.45□□□□□ -0.1
APLF-203ENST00000445692 GSPT1P15170 499 aaKnown RBP14.45□□□□□ -0.1
APLF-203ENST00000445692 MX1P20591 662 aa14.45□□□□□ -0.1
APLF-203ENST00000445692 STK11IPQ8N1F8 1099 aa14.45□□□□□ -0.1
APLF-203ENST00000445692 SIL1Q9H173 461 aa14.45□□□□□ -0.1
APLF-203ENST00000445692 LARP1BQ659C4 914 aaKnown RBP14.45□□□□□ -0.1
APLF-203ENST00000445692 NSFL1CQ9UNZ2 370 aaKnown RBP14.45□□□□□ -0.1
APLF-203ENST00000445692 TRMT1Q9NXH9 659 aaKnown RBP14.44□□□□□ -0.1
APLF-203ENST00000445692 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.44□□□□□ -0.1
APLF-203ENST00000445692 DYNC1I1O14576 645 aa14.44□□□□□ -0.1
APLF-203ENST00000445692 DDX11Q96FC9 970 aa14.44□□□□□ -0.1
APLF-203ENST00000445692 GPATCH3Q96I76 525 aa14.44□□□□□ -0.1
APLF-203ENST00000445692 SYCP2Q9BX26 1530 aa14.44□□□□□ -0.1
APLF-203ENST00000445692 MCM2P49736 904 aa14.44□□□□□ -0.1
APLF-203ENST00000445692 FAM177A1Q8N128 213 aaPredicted RBP14.44□□□□□ -0.1
APLF-203ENST00000445692 NECAB1Q8N987 351 aa14.44□□□□□ -0.1
APLF-203ENST00000445692 NOL7Q9UMY1 257 aaKnown RBP14.43□□□□□ -0.1
APLF-203ENST00000445692 MBD5Q9P267 1494 aa14.43□□□□□ -0.1
APLF-203ENST00000445692 SRGAP3O43295 1099 aa14.43□□□□□ -0.1
APLF-203ENST00000445692 GPT2Q8TD30 523 aa14.43□□□□□ -0.1
APLF-203ENST00000445692 TNMDQ9H2S6 317 aa14.43□□□□□ -0.1
APLF-203ENST00000445692 CCDC192P0DO97 292 aa14.43□□□□□ -0.1
APLF-203ENST00000445692 INSRP06213 1382 aa14.43□□□□□ -0.1
APLF-203ENST00000445692 PRPF40BQ6NWY9 871 aaKnown RBP14.42□□□□□ -0.1
APLF-203ENST00000445692 LRRFIP2Q9Y608 721 aaKnown RBP14.42□□□□□ -0.1
APLF-203ENST00000445692 NCKAP5LQ9HCH0 1330 aa14.42□□□□□ -0.1
APLF-203ENST00000445692 FAM173BQ6P4H8 233 aa14.42□□□□□ -0.1
APLF-203ENST00000445692 VGLL3A8MV65 326 aa14.42□□□□□ -0.1
APLF-203ENST00000445692 ANXA1P04083 346 aa14.42□□□□□ -0.1
APLF-203ENST00000445692 CCDC112Q8NEF3 446 aa14.42□□□□□ -0.1
APLF-203ENST00000445692 TRAPPC8Q9Y2L5 1435 aa14.41□□□□□ -0.1
APLF-203ENST00000445692 GNAI3P08754 354 aa14.41□□□□□ -0.1
APLF-203ENST00000445692 PDE1AP54750 535 aa14.41□□□□□ -0.1
APLF-203ENST00000445692 IDI1Q13907 227 aa14.41□□□□□ -0.1
APLF-203ENST00000445692 CCDC183Q5T5S1 534 aa14.41□□□□□ -0.1
APLF-203ENST00000445692 CNTROBQ8N137 903 aa14.41□□□□□ -0.1
APLF-203ENST00000445692 RUFY2Q8WXA3 655 aa14.41□□□□□ -0.1
APLF-203ENST00000445692 CHMP4AQ9BY43 222 aa14.41□□□□□ -0.1
APLF-203ENST00000445692 C14orf93Q9H972 538 aaKnown RBP14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms