RNA–Protein interactions for RNA: ENST00000445140.6

FXR1-203, Transcript of FMR1 autosomal homolog 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FXR1, Length 2,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-203ENST00000445140 NBPF4Q96M43 638 aa11.65□□□□□ -0.54
FXR1-203ENST00000445140 CHRNA2Q15822 529 aa11.65□□□□□ -0.54
FXR1-203ENST00000445140 ZNF772Q68DY9 489 aaPredicted RBP11.65□□□□□ -0.54
FXR1-203ENST00000445140 RGPD3A6NKT7 1758 aaPredicted RBP11.65□□□□□ -0.54
FXR1-203ENST00000445140 RGPD4Q7Z3J3 1758 aa11.65□□□□□ -0.54
FXR1-203ENST00000445140 ADAMTS8Q9UP79 889 aa11.64□□□□□ -0.55
FXR1-203ENST00000445140 KDM3BQ7LBC6 1761 aa11.64□□□□□ -0.55
FXR1-203ENST00000445140 AFF2P51816 1311 aa11.64□□□□□ -0.55
FXR1-203ENST00000445140 TOGARAM1Q9Y4F4 1720 aa11.64□□□□□ -0.55
FXR1-203ENST00000445140 TRPC5Q9UL62 973 aaPredicted RBP11.64□□□□□ -0.55
FXR1-203ENST00000445140 NHSQ6T4R5 1651 aa11.64□□□□□ -0.55
FXR1-203ENST00000445140 TCP11L2Q8N4U5 519 aa11.63□□□□□ -0.55
FXR1-203ENST00000445140 UBR2Q8IWV8 1755 aa11.63□□□□□ -0.55
FXR1-203ENST00000445140 GAS2L2Q8NHY3 880 aa11.63□□□□□ -0.55
FXR1-203ENST00000445140 ZNF521Q96K83 1311 aa11.63□□□□□ -0.55
FXR1-203ENST00000445140 U2AF1L5P0DN76 240 aaPredicted RBP11.63□□□□□ -0.55
FXR1-203ENST00000445140 U2AF1Q01081 240 aaKnown RBP eCLIP11.63□□□□□ -0.55
FXR1-203ENST00000445140 SBF2Q86WG5 1849 aa11.62□□□□□ -0.55
FXR1-203ENST00000445140 NKX1-1Q15270 411 aaPredicted RBP11.62□□□□□ -0.55
FXR1-203ENST00000445140 LARP1Q6PKG0 1096 aaKnown RBP11.62□□□□□ -0.55
FXR1-203ENST00000445140 USP21Q9UK80 565 aa11.62□□□□□ -0.55
FXR1-203ENST00000445140 PPM1GO15355 546 aaPredicted RBP11.62□□□□□ -0.55
FXR1-203ENST00000445140 SOX12O15370 315 aa11.62□□□□□ -0.55
FXR1-203ENST00000445140 SULT6B1Q6IMI4 303 aa11.62□□□□□ -0.55
FXR1-203ENST00000445140 NGLY1Q96IV0 654 aa11.62□□□□□ -0.55
FXR1-203ENST00000445140 CEMIPQ8WUJ3 1361 aa11.62□□□□□ -0.55
FXR1-203ENST00000445140 BRWD3Q6RI45 1802 aa11.61□□□□□ -0.55
FXR1-203ENST00000445140 IL16Q14005 1332 aa11.61□□□□□ -0.55
FXR1-203ENST00000445140 ADAMTS2O95450 1211 aa11.61□□□□□ -0.55
FXR1-203ENST00000445140 IL2RBP14784 551 aa11.61□□□□□ -0.55
FXR1-203ENST00000445140 NFE2L2Q16236 605 aa11.61□□□□□ -0.55
FXR1-203ENST00000445140 ITGB4P16144 1822 aa11.61□□□□□ -0.55
FXR1-203ENST00000445140 NUTM2BA6NNL0 878 aaPredicted RBP11.61□□□□□ -0.55
FXR1-203ENST00000445140 NUTM2EB1AL46 878 aaPredicted RBP11.61□□□□□ -0.55
FXR1-203ENST00000445140 LMOD3Q0VAK6 560 aa11.61□□□□□ -0.55
FXR1-203ENST00000445140 MEX3CQ5U5Q3 659 aaKnown RBP11.61□□□□□ -0.55
FXR1-203ENST00000445140 NUTM2AQ8IVF1 878 aaPredicted RBP11.61□□□□□ -0.55
FXR1-203ENST00000445140 BABAM1Q9NWV8 329 aa11.61□□□□□ -0.55
FXR1-203ENST00000445140 ZBED9Q6R2W3 1325 aa11.6□□□□□ -0.55
FXR1-203ENST00000445140 MAP3K5Q99683 1374 aa11.6□□□□□ -0.55
FXR1-203ENST00000445140 TATP17735 454 aaPredicted RBP11.6□□□□□ -0.55
FXR1-203ENST00000445140 PRKAR2BP31323 418 aa11.6□□□□□ -0.55
FXR1-203ENST00000445140 EVA1CP58658 441 aa11.6□□□□□ -0.55
FXR1-203ENST00000445140 PLEKHO1Q53GL0 409 aaPredicted RBP11.6□□□□□ -0.55
FXR1-203ENST00000445140 TOM1L2Q6ZVM7 507 aa11.6□□□□□ -0.55
FXR1-203ENST00000445140 C8orf37Q96NL8 207 aa11.6□□□□□ -0.55
FXR1-203ENST00000445140 DOT1LQ8TEK3 1739 aa11.6□□□□□ -0.55
FXR1-203ENST00000445140 PCDH11XQ9BZA7 1347 aa11.6□□□□□ -0.55
FXR1-203ENST00000445140 PCDH11YQ9BZA8 1340 aa11.6□□□□□ -0.55
FXR1-203ENST00000445140 U2SURPO15042 1029 aaKnown RBP11.59□□□□□ -0.55
FXR1-203ENST00000445140 AEBP1Q8IUX7 1158 aa11.59□□□□□ -0.55
FXR1-203ENST00000445140 GJD4Q96KN9 370 aaPredicted RBP11.59□□□□□ -0.55
FXR1-203ENST00000445140 SPG7Q9UQ90 795 aa11.59□□□□□ -0.55
FXR1-203ENST00000445140 HSP90AB1P08238 724 aaKnown RBP11.59□□□□□ -0.55
FXR1-203ENST00000445140 CSB-PGBD3P0DP91 1061 aa11.59□□□□□ -0.55
FXR1-203ENST00000445140 RAPGEF4Q8WZA2 1011 aa11.59□□□□□ -0.55
FXR1-203ENST00000445140 NLRP2Q9NX02 1062 aa11.59□□□□□ -0.55
FXR1-203ENST00000445140 MAPK8IP3Q9UPT6 1336 aa11.59□□□□□ -0.55
FXR1-203ENST00000445140 NEFMP07197 916 aa11.58□□□□□ -0.56
FXR1-203ENST00000445140 AKAP4Q5JQC9 854 aa11.58□□□□□ -0.56
FXR1-203ENST00000445140 ILDR1Q86SU0 546 aaPredicted RBP11.58□□□□□ -0.56
FXR1-203ENST00000445140 TMPOP42166 694 aaKnown RBP11.58□□□□□ -0.56
FXR1-203ENST00000445140 PDE3BQ13370 1112 aa11.58□□□□□ -0.56
FXR1-203ENST00000445140 TMEM132AQ24JP5 1023 aa11.57□□□□□ -0.56
FXR1-203ENST00000445140 WDR63Q8IWG1 891 aa11.57□□□□□ -0.56
FXR1-203ENST00000445140 LAMB4A4D0S4 1761 aa11.57□□□□□ -0.56
FXR1-203ENST00000445140 RBM6P78332 1123 aaKnown RBP11.57□□□□□ -0.56
FXR1-203ENST00000445140 KDM6AO15550 1401 aaPredicted RBP11.57□□□□□ -0.56
FXR1-203ENST00000445140 CALD1Q05682 793 aaKnown RBP11.56□□□□□ -0.56
FXR1-203ENST00000445140 RREB1Q92766 1687 aa11.56□□□□□ -0.56
FXR1-203ENST00000445140 LY75O60449 1722 aa11.56□□□□□ -0.56
FXR1-203ENST00000445140 LTV1Q96GA3 475 aaPredicted RBP11.55□□□□□ -0.56
FXR1-203ENST00000445140 PHACTR3Q96KR7 559 aa11.55□□□□□ -0.56
FXR1-203ENST00000445140 STRN4Q9NRL3 753 aa11.55□□□□□ -0.56
FXR1-203ENST00000445140 MTHFSDQ2M296 383 aaKnown RBP11.55□□□□□ -0.56
FXR1-203ENST00000445140 IFNL2Q8IZJ0 200 aa11.55□□□□□ -0.56
FXR1-203ENST00000445140 ZCRB1Q8TBF4 217 aaKnown RBP11.55□□□□□ -0.56
FXR1-203ENST00000445140 SOS1Q07889 1333 aaPredicted RBP11.55□□□□□ -0.56
FXR1-203ENST00000445140 TNS1Q9HBL0 1735 aaKnown RBP11.54□□□□□ -0.56
FXR1-203ENST00000445140 HMOX1P09601 288 aa11.54□□□□□ -0.56
FXR1-203ENST00000445140 PHKG2P15735 406 aa11.54□□□□□ -0.56
FXR1-203ENST00000445140 CACNA1FO60840 1977 aa11.54□□□□□ -0.56
FXR1-203ENST00000445140 RGS12O14924 1447 aa11.54□□□□□ -0.56
FXR1-203ENST00000445140 ZBTB7CA1YPR0 619 aa11.54□□□□□ -0.56
FXR1-203ENST00000445140 CNGB1Q14028 1251 aaPredicted RBP11.54□□□□□ -0.56
FXR1-203ENST00000445140 FAM9BQ8IZU0 186 aa11.54□□□□□ -0.56
FXR1-203ENST00000445140 RGS17Q9UGC6 210 aaPredicted RBP11.54□□□□□ -0.56
FXR1-203ENST00000445140 TRIM35Q9UPQ4 493 aa11.54□□□□□ -0.56
FXR1-203ENST00000445140 GNAT3A8MTJ3 354 aa11.53□□□□□ -0.56
FXR1-203ENST00000445140 TRMT2AQ8IZ69 625 aaKnown RBP11.53□□□□□ -0.56
FXR1-203ENST00000445140 DCAF5Q96JK2 942 aa11.53□□□□□ -0.56
FXR1-203ENST00000445140 ERVV-2B6SEH9 535 aa11.53□□□□□ -0.56
FXR1-203ENST00000445140 PIAS4Q8N2W9 510 aaPredicted RBP11.53□□□□□ -0.56
FXR1-203ENST00000445140 QTRT2Q9H974 415 aaKnown RBP11.53□□□□□ -0.56
FXR1-203ENST00000445140 ZNF853P0CG23 659 aa11.53□□□□□ -0.56
FXR1-203ENST00000445140 USHBP1Q8N6Y0 703 aa11.53□□□□□ -0.56
FXR1-203ENST00000445140 APAF1O14727 1248 aa11.52□□□□□ -0.57
FXR1-203ENST00000445140 CYP27B1O15528 508 aa11.52□□□□□ -0.57
FXR1-203ENST00000445140 C5P01031 1676 aa11.52□□□□□ -0.57
FXR1-203ENST00000445140 BTAF1O14981 1849 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms