RNA–Protein interactions for RNA: ENST00000444688.1

LINC00299-203, long intergenic non-protein coding RNA 299, humanhuman

TSL 4 BASIC

Gene LINC00299, Length 537 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00299-203ENST00000444688 MAPK8IP3Q9UPT6 1336 aa17.46■□□□□ 0.38
LINC00299-203ENST00000444688 GLI3P10071 1580 aa17.45■□□□□ 0.38
LINC00299-203ENST00000444688 RBM6P78332 1123 aaKnown RBP17.45■□□□□ 0.38
LINC00299-203ENST00000444688 AMOTQ4VCS5 1084 aa17.45■□□□□ 0.38
LINC00299-203ENST00000444688 PLEKHO1Q53GL0 409 aaPredicted RBP17.45■□□□□ 0.38
LINC00299-203ENST00000444688 PARP4Q9UKK3 1724 aaKnown RBP17.44■□□□□ 0.38
LINC00299-203ENST00000444688 WNK3Q9BYP7 1800 aa17.43■□□□□ 0.38
LINC00299-203ENST00000444688 ONECUT3O60422 494 aaPredicted RBP17.43■□□□□ 0.38
LINC00299-203ENST00000444688 FAM98CQ17RN3 349 aaKnown RBP17.43■□□□□ 0.38
LINC00299-203ENST00000444688 CCDC146Q8IYE0 955 aa17.43■□□□□ 0.38
LINC00299-203ENST00000444688 SPG7Q9UQ90 795 aa17.43■□□□□ 0.38
LINC00299-203ENST00000444688 GAS2L2Q8NHY3 880 aa17.42■□□□□ 0.38
LINC00299-203ENST00000444688 PHACTR3Q96KR7 559 aa17.42■□□□□ 0.38
LINC00299-203ENST00000444688 RXRBP28702 533 aa17.41■□□□□ 0.38
LINC00299-203ENST00000444688 ZCRB1Q8TBF4 217 aaKnown RBP17.41■□□□□ 0.38
LINC00299-203ENST00000444688 TNS2Q63HR2 1409 aa17.4■□□□□ 0.38
LINC00299-203ENST00000444688 THSD7AQ9UPZ6 1657 aa17.4■□□□□ 0.38
LINC00299-203ENST00000444688 EXOC5O00471 708 aa17.4■□□□□ 0.38
LINC00299-203ENST00000444688 PKD1L3Q7Z443 1732 aa17.4■□□□□ 0.38
LINC00299-203ENST00000444688 NFE2L2Q16236 605 aa17.39■□□□□ 0.37
LINC00299-203ENST00000444688 DDB1Q16531 1140 aa17.39■□□□□ 0.37
LINC00299-203ENST00000444688 MTHFSDQ2M296 383 aaKnown RBP17.39■□□□□ 0.37
LINC00299-203ENST00000444688 NCBP3Q53F19 620 aaKnown RBP17.39■□□□□ 0.37
LINC00299-203ENST00000444688 POTEAQ6S8J7 498 aa17.39■□□□□ 0.37
LINC00299-203ENST00000444688 PCDH11XQ9BZA7 1347 aa17.39■□□□□ 0.37
LINC00299-203ENST00000444688 PCDH11YQ9BZA8 1340 aa17.39■□□□□ 0.37
LINC00299-203ENST00000444688 A0A0G2JS52 829 aa17.38■□□□□ 0.37
LINC00299-203ENST00000444688 APAF1O14727 1248 aa17.38■□□□□ 0.37
LINC00299-203ENST00000444688 TMPOP42166 694 aaKnown RBP17.38■□□□□ 0.37
LINC00299-203ENST00000444688 MYT1Q01538 1121 aa17.38■□□□□ 0.37
LINC00299-203ENST00000444688 ZNF530Q6P9A1 599 aaPredicted RBP17.38■□□□□ 0.37
LINC00299-203ENST00000444688 NGEFQ8N5V2 710 aa17.38■□□□□ 0.37
LINC00299-203ENST00000444688 LRRC37A3O60309 1634 aa17.37■□□□□ 0.37
LINC00299-203ENST00000444688 SEPT12Q8IYM1 358 aa17.37■□□□□ 0.37
LINC00299-203ENST00000444688 AKAP4Q5JQC9 854 aa17.36■□□□□ 0.37
LINC00299-203ENST00000444688 C1orf141Q5JVX7 400 aa17.36■□□□□ 0.37
LINC00299-203ENST00000444688 IFNL2Q8IZJ0 200 aa17.36■□□□□ 0.37
LINC00299-203ENST00000444688 CYP27B1O15528 508 aa17.35■□□□□ 0.37
LINC00299-203ENST00000444688 HTATSF1O43719 755 aaKnown RBP17.35■□□□□ 0.37
LINC00299-203ENST00000444688 HSP90AB1P08238 724 aaKnown RBP17.35■□□□□ 0.37
LINC00299-203ENST00000444688 PHKG2P15735 406 aa17.35■□□□□ 0.37
LINC00299-203ENST00000444688 LMOD3Q0VAK6 560 aa17.35■□□□□ 0.37
LINC00299-203ENST00000444688 MAP3K5Q99683 1374 aa17.35■□□□□ 0.37
LINC00299-203ENST00000444688 GNAT3A8MTJ3 354 aa17.34■□□□□ 0.37
LINC00299-203ENST00000444688 RIPK4P57078 832 aa17.34■□□□□ 0.37
LINC00299-203ENST00000444688 PDE3BQ13370 1112 aa17.34■□□□□ 0.37
LINC00299-203ENST00000444688 CCDC27Q2M243 656 aa17.33■□□□□ 0.36
LINC00299-203ENST00000444688 DDX54Q8TDD1 881 aaKnown RBP17.33■□□□□ 0.36
LINC00299-203ENST00000444688 RRP7AQ9Y3A4 280 aaKnown RBP17.33■□□□□ 0.36
LINC00299-203ENST00000444688 SHANK3Q9BYB0 1731 aa17.33■□□□□ 0.36
LINC00299-203ENST00000444688 NKX1-1Q15270 411 aaPredicted RBP17.32■□□□□ 0.36
LINC00299-203ENST00000444688 RTF1Q92541 710 aaKnown RBP17.32■□□□□ 0.36
LINC00299-203ENST00000444688 RGS12O14924 1447 aa17.31■□□□□ 0.36
LINC00299-203ENST00000444688 HNRNPUQ00839 825 aaKnown RBP eCLIP17.31■□□□□ 0.36
LINC00299-203ENST00000444688 NEUROD2Q15784 382 aa17.31■□□□□ 0.36
LINC00299-203ENST00000444688 DCAF5Q96JK2 942 aa17.31■□□□□ 0.36
LINC00299-203ENST00000444688 MARCH10Q8NA82 808 aaPredicted RBP17.3■□□□□ 0.36
LINC00299-203ENST00000444688 TRIM35Q9UPQ4 493 aa17.3■□□□□ 0.36
LINC00299-203ENST00000444688 KRT27Q7Z3Y8 459 aa17.29■□□□□ 0.36
LINC00299-203ENST00000444688 RNMTO43148 476 aaKnown RBP17.28■□□□□ 0.36
LINC00299-203ENST00000444688 MPRIPQ6WCQ1 1025 aa17.28■□□□□ 0.36
LINC00299-203ENST00000444688 BCL9O00512 1426 aa17.28■□□□□ 0.36
LINC00299-203ENST00000444688 KDM6AO15550 1401 aaPredicted RBP17.28■□□□□ 0.36
LINC00299-203ENST00000444688 CEMIPQ8WUJ3 1361 aa17.28■□□□□ 0.36
LINC00299-203ENST00000444688 ADAMTS7Q9UKP4 1686 aa17.27■□□□□ 0.36
LINC00299-203ENST00000444688 WWC1Q8IX03 1113 aa17.27■□□□□ 0.36
LINC00299-203ENST00000444688 IL17REQ8NFR9 667 aa17.27■□□□□ 0.36
LINC00299-203ENST00000444688 SALL2Q9Y467 1007 aaPredicted RBP17.27■□□□□ 0.36
LINC00299-203ENST00000444688 DLG5Q8TDM6 1919 aa17.27■□□□□ 0.35
LINC00299-203ENST00000444688 SENP3-EIF4A1A0A087X0R7 540 aa17.26■□□□□ 0.35
LINC00299-203ENST00000444688 CALD1Q05682 793 aaKnown RBP17.26■□□□□ 0.35
LINC00299-203ENST00000444688 MCM10Q7L590 875 aa17.26■□□□□ 0.35
LINC00299-203ENST00000444688 ZBED9Q6R2W3 1325 aa17.25■□□□□ 0.35
LINC00299-203ENST00000444688 ZNF521Q96K83 1311 aa17.25■□□□□ 0.35
LINC00299-203ENST00000444688 ERVV-2B6SEH9 535 aa17.25■□□□□ 0.35
LINC00299-203ENST00000444688 DCTN1Q14203 1278 aa17.25■□□□□ 0.35
LINC00299-203ENST00000444688 LGR6Q9HBX8 967 aa17.25■□□□□ 0.35
LINC00299-203ENST00000444688 WDR63Q8IWG1 891 aa17.24■□□□□ 0.35
LINC00299-203ENST00000444688 MRC1P22897 1456 aa17.24■□□□□ 0.35
LINC00299-203ENST00000444688 BRWD3Q6RI45 1802 aa17.24■□□□□ 0.35
LINC00299-203ENST00000444688 TEFQ10587 303 aa17.23■□□□□ 0.35
LINC00299-203ENST00000444688 FAM196AQ6ZSG2 479 aa17.23■□□□□ 0.35
LINC00299-203ENST00000444688 SCN11AQ9UI33 1791 aa17.23■□□□□ 0.35
LINC00299-203ENST00000444688 IL16Q14005 1332 aa17.22■□□□□ 0.35
LINC00299-203ENST00000444688 YTHDC1Q96MU7 727 aaKnown RBP17.22■□□□□ 0.35
LINC00299-203ENST00000444688 THUMPD2Q9BTF0 503 aaKnown RBP17.22■□□□□ 0.35
LINC00299-203ENST00000444688 SLC52A2Q9HAB3 445 aa17.22■□□□□ 0.35
LINC00299-203ENST00000444688 CABP4P57796 275 aa17.21■□□□□ 0.35
LINC00299-203ENST00000444688 TOGARAM1Q9Y4F4 1720 aa17.21■□□□□ 0.35
LINC00299-203ENST00000444688 GOLGA2Q08379 1002 aa17.2■□□□□ 0.34
LINC00299-203ENST00000444688 TAF7Q15545 349 aaPredicted RBP17.2■□□□□ 0.34
LINC00299-203ENST00000444688 FAM182BQ5T319 152 aa17.2■□□□□ 0.34
LINC00299-203ENST00000444688 IFT57Q9NWB7 429 aa17.2■□□□□ 0.34
LINC00299-203ENST00000444688 BABAM1Q9NWV8 329 aa17.2■□□□□ 0.34
LINC00299-203ENST00000444688 TMOD3Q9NYL9 352 aa17.2■□□□□ 0.34
LINC00299-203ENST00000444688 DOT1LQ8TEK3 1739 aa17.19■□□□□ 0.34
LINC00299-203ENST00000444688 PRIM1P49642 420 aaKnown RBP17.18■□□□□ 0.34
LINC00299-203ENST00000444688 GNAI1P63096 354 aa17.18■□□□□ 0.34
LINC00299-203ENST00000444688 NFATC2IPQ8NCF5 419 aa17.18■□□□□ 0.34
LINC00299-203ENST00000444688 ACSBG1Q96GR2 724 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms