RNA–Protein interactions for RNA: ENST00000443908.5

SF1-210, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-210ENST00000443908 HSP90AB2PQ58FF8 381 aa17.85■□□□□ 0.45
SF1-210ENST00000443908 BCL11BQ9C0K0 894 aaPredicted RBP17.85■□□□□ 0.45
SF1-210ENST00000443908 COL18A1P39060 1754 aa17.84■□□□□ 0.45
SF1-210ENST00000443908 PLSCR1O15162 318 aa17.84■□□□□ 0.45
SF1-210ENST00000443908 YY1P25490 414 aa17.84■□□□□ 0.45
SF1-210ENST00000443908 YTHDC1Q96MU7 727 aaKnown RBP17.84■□□□□ 0.45
SF1-210ENST00000443908 EXOC5O00471 708 aa17.83■□□□□ 0.44
SF1-210ENST00000443908 U2AF1L5P0DN76 240 aaPredicted RBP17.83■□□□□ 0.44
SF1-210ENST00000443908 U2AF1Q01081 240 aaKnown RBP eCLIP17.83■□□□□ 0.443e-13■□□□□ 8.2
SF1-210ENST00000443908 CDCA7Q9BWT1 371 aaPredicted RBP17.83■□□□□ 0.44
SF1-210ENST00000443908 OVOS2A0A0G2JMS6 1433 aa17.82■□□□□ 0.44
SF1-210ENST00000443908 WDR17Q8IZU2 1322 aa17.82■□□□□ 0.44
SF1-210ENST00000443908 U2SURPO15042 1029 aaKnown RBP17.82■□□□□ 0.44
SF1-210ENST00000443908 HNRNPUQ00839 825 aaKnown RBP eCLIP17.82■□□□□ 0.44
SF1-210ENST00000443908 PTF1AQ7RTS3 328 aa17.82■□□□□ 0.44
SF1-210ENST00000443908 MARCH10Q8NA82 808 aaPredicted RBP17.82■□□□□ 0.44
SF1-210ENST00000443908 PNNQ9H307 717 aaKnown RBP17.82■□□□□ 0.44
SF1-210ENST00000443908 LMO7Q8WWI1 1683 aa17.82■□□□□ 0.44
SF1-210ENST00000443908 IGSF1Q8N6C5 1336 aa17.81■□□□□ 0.44
SF1-210ENST00000443908 FCHSD2O94868 740 aa17.81■□□□□ 0.44
SF1-210ENST00000443908 NGEFQ8N5V2 710 aa17.81■□□□□ 0.44
SF1-210ENST00000443908 KDRP35968 1356 aa17.8■□□□□ 0.44
SF1-210ENST00000443908 ZBED9Q6R2W3 1325 aa17.8■□□□□ 0.44
SF1-210ENST00000443908 RUNDC1Q96C34 613 aa17.8■□□□□ 0.44
SF1-210ENST00000443908 CARD10Q9BWT7 1032 aa17.8■□□□□ 0.44
SF1-210ENST00000443908 FAM208AQ9UK61 1670 aaKnown RBP17.8■□□□□ 0.44
SF1-210ENST00000443908 NCAPD2Q15021 1401 aa17.8■□□□□ 0.44
SF1-210ENST00000443908 NCBP3Q53F19 620 aaKnown RBP17.79■□□□□ 0.44
SF1-210ENST00000443908 RSPH6AQ9H0K4 717 aa17.79■□□□□ 0.44
SF1-210ENST00000443908 PLEKHF1Q96S99 279 aa17.78■□□□□ 0.44
SF1-210ENST00000443908 ERBB3P21860 1342 aa17.77■□□□□ 0.44
SF1-210ENST00000443908 ZBTB7AO95365 584 aa17.77■□□□□ 0.44
SF1-210ENST00000443908 PROM2Q8N271 834 aa17.77■□□□□ 0.44
SF1-210ENST00000443908 STK32BQ9NY57 414 aa17.77■□□□□ 0.44
SF1-210ENST00000443908 ANO8Q9HCE9 1232 aaPredicted RBP17.76■□□□□ 0.43
SF1-210ENST00000443908 NLRP2Q9NX02 1062 aa17.76■□□□□ 0.43
SF1-210ENST00000443908 ATF5Q9Y2D1 282 aaPredicted RBP17.76■□□□□ 0.43
SF1-210ENST00000443908 TXNRD1Q16881 649 aa17.75■□□□□ 0.43
SF1-210ENST00000443908 ANKRD24Q8TF21 1146 aa17.75■□□□□ 0.43
SF1-210ENST00000443908 EYA1Q99502 592 aa17.75■□□□□ 0.43
SF1-210ENST00000443908 PDGFDQ9GZP0 370 aaPredicted RBP17.75■□□□□ 0.43
SF1-210ENST00000443908 RGPD5Q99666 1765 aa17.74■□□□□ 0.43
SF1-210ENST00000443908 CCDC146Q8IYE0 955 aa17.74■□□□□ 0.43
SF1-210ENST00000443908 PLEKHG2Q9H7P9 1386 aa17.74■□□□□ 0.43
SF1-210ENST00000443908 MAPK8IP3Q9UPT6 1336 aa17.73■□□□□ 0.43
SF1-210ENST00000443908 PARP4Q9UKK3 1724 aaKnown RBP17.73■□□□□ 0.43
SF1-210ENST00000443908 PRKAR2BP31323 418 aa17.73■□□□□ 0.43
SF1-210ENST00000443908 SULT6B1Q6IMI4 303 aa17.73■□□□□ 0.43
SF1-210ENST00000443908 ACSBG1Q96GR2 724 aa17.73■□□□□ 0.43
SF1-210ENST00000443908 NUP188Q5SRE5 1749 aa17.72■□□□□ 0.43
SF1-210ENST00000443908 RREB1Q92766 1687 aa17.72■□□□□ 0.43
SF1-210ENST00000443908 APAF1O14727 1248 aa17.72■□□□□ 0.43
SF1-210ENST00000443908 NEFMP07197 916 aa17.72■□□□□ 0.43
SF1-210ENST00000443908 CENPBP07199 599 aaPredicted RBP17.72■□□□□ 0.43
SF1-210ENST00000443908 HMOX1P09601 288 aa17.72■□□□□ 0.43
SF1-210ENST00000443908 SLC15A2Q16348 729 aa17.71■□□□□ 0.43
SF1-210ENST00000443908 AEBP1Q8IUX7 1158 aa17.71■□□□□ 0.43
SF1-210ENST00000443908 LTV1Q96GA3 475 aaPredicted RBP17.71■□□□□ 0.43
SF1-210ENST00000443908 CCDC27Q2M243 656 aa17.7■□□□□ 0.42
SF1-210ENST00000443908 NBPF6Q5VWK0 638 aa17.69■□□□□ 0.42
SF1-210ENST00000443908 NBPF4Q96M43 638 aa17.69■□□□□ 0.42
SF1-210ENST00000443908 ZNF521Q96K83 1311 aa17.69■□□□□ 0.42
SF1-210ENST00000443908 RGPD2P0DJD1 1756 aa17.68■□□□□ 0.42
SF1-210ENST00000443908 IL2RBP14784 551 aa17.68■□□□□ 0.42
SF1-210ENST00000443908 TMPOP42166 694 aaKnown RBP17.68■□□□□ 0.42
SF1-210ENST00000443908 NFE2L2Q16236 605 aa17.67■□□□□ 0.42
SF1-210ENST00000443908 LRRC37A3O60309 1634 aa17.66■□□□□ 0.42
SF1-210ENST00000443908 BCL9O00512 1426 aa17.65■□□□□ 0.42
SF1-210ENST00000443908 PTGER2P43116 358 aa17.65■□□□□ 0.42
SF1-210ENST00000443908 DDX54Q8TDD1 881 aaKnown RBP17.65■□□□□ 0.42
SF1-210ENST00000443908 PHACTR3Q96KR7 559 aa17.65■□□□□ 0.42
SF1-210ENST00000443908 SBF2Q86WG5 1849 aa17.64■□□□□ 0.41
SF1-210ENST00000443908 SYT17Q9BSW7 474 aa17.64■□□□□ 0.41
SF1-210ENST00000443908 FHDC1Q9C0D6 1143 aaPredicted RBP17.64■□□□□ 0.41
SF1-210ENST00000443908 MTFR1LQ9H019 292 aa17.64■□□□□ 0.41
SF1-210ENST00000443908 LMOD3Q0VAK6 560 aa17.63■□□□□ 0.41
SF1-210ENST00000443908 WWC1Q8IX03 1113 aa17.63■□□□□ 0.41
SF1-210ENST00000443908 USHBP1Q8N6Y0 703 aa17.63■□□□□ 0.41
SF1-210ENST00000443908 GAS2L2Q8NHY3 880 aa17.63■□□□□ 0.41
SF1-210ENST00000443908 KAT6BQ8WYB5 2073 aa17.62■□□□□ 0.41
SF1-210ENST00000443908 RIPK4P57078 832 aa17.61■□□□□ 0.41
SF1-210ENST00000443908 WDR63Q8IWG1 891 aa17.61■□□□□ 0.41
SF1-210ENST00000443908 SYTL4Q96C24 671 aaPredicted RBP17.61■□□□□ 0.41
SF1-210ENST00000443908 TRIM35Q9UPQ4 493 aa17.61■□□□□ 0.41
SF1-210ENST00000443908 RRP7AQ9Y3A4 280 aaKnown RBP17.61■□□□□ 0.41
SF1-210ENST00000443908 SALL2Q9Y467 1007 aaPredicted RBP17.61■□□□□ 0.41
SF1-210ENST00000443908 GOLGA2Q08379 1002 aa17.6■□□□□ 0.41
SF1-210ENST00000443908 AMOTQ4VCS5 1084 aa17.6■□□□□ 0.41
SF1-210ENST00000443908 ARXQ96QS3 562 aa17.6■□□□□ 0.41
SF1-210ENST00000443908 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.6■□□□□ 0.41
SF1-210ENST00000443908 PKD1L3Q7Z443 1732 aa17.6■□□□□ 0.41
SF1-210ENST00000443908 MEGF6O75095 1541 aa17.59■□□□□ 0.41
SF1-210ENST00000443908 TNS2Q63HR2 1409 aa17.59■□□□□ 0.41
SF1-210ENST00000443908 IL16Q14005 1332 aa17.59■□□□□ 0.41
SF1-210ENST00000443908 SENP3-EIF4A1A0A087X0R7 540 aa17.59■□□□□ 0.41
SF1-210ENST00000443908 NEUROD2Q15784 382 aa17.59■□□□□ 0.41
SF1-210ENST00000443908 MTHFSDQ2M296 383 aaKnown RBP17.59■□□□□ 0.41
SF1-210ENST00000443908 KLHL34Q8N239 644 aa17.59■□□□□ 0.41
SF1-210ENST00000443908 RAPGEF4Q8WZA2 1011 aa17.59■□□□□ 0.41
SF1-210ENST00000443908 DLG5Q8TDM6 1919 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms