RNA–Protein interactions for RNA: ENST00000442956.1

LINC00299-202, long intergenic non-protein coding RNA 299, humanhuman

TSL 2 BASIC

Gene LINC00299, Length 2,342 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00299-202ENST00000442956 ZNF428Q96B54 188 aa18.79■□□□□ 0.6
LINC00299-202ENST00000442956 NCAPD2Q15021 1401 aa18.79■□□□□ 0.6
LINC00299-202ENST00000442956 CPDO75976 1380 aa18.78■□□□□ 0.6
LINC00299-202ENST00000442956 MAP3K5Q99683 1374 aa18.78■□□□□ 0.6
LINC00299-202ENST00000442956 VAMP4O75379 141 aa18.78■□□□□ 0.6
LINC00299-202ENST00000442956 ELL2O00472 640 aaPredicted RBP18.78■□□□□ 0.6
LINC00299-202ENST00000442956 ALDH1L2Q3SY69 923 aa18.78■□□□□ 0.6
LINC00299-202ENST00000442956 C8orf58Q8NAV2 365 aa18.78■□□□□ 0.6
LINC00299-202ENST00000442956 ZKSCAN2Q63HK3 967 aa18.77■□□□□ 0.6
LINC00299-202ENST00000442956 TWISTNBQ3B726 338 aaPredicted RBP18.77■□□□□ 0.59
LINC00299-202ENST00000442956 TNNQ9UQP3 1299 aa18.77■□□□□ 0.59
LINC00299-202ENST00000442956 COG6Q9Y2V7 657 aa18.76■□□□□ 0.59
LINC00299-202ENST00000442956 LTBP4Q8N2S1 1624 aa18.76■□□□□ 0.59
LINC00299-202ENST00000442956 RLBP1P12271 317 aa18.75■□□□□ 0.59
LINC00299-202ENST00000442956 CRYBG1Q9Y4K1 1723 aa18.75■□□□□ 0.59
LINC00299-202ENST00000442956 RGPD2P0DJD1 1756 aa18.75■□□□□ 0.59
LINC00299-202ENST00000442956 PLEKHO1Q53GL0 409 aaPredicted RBP18.75■□□□□ 0.59
LINC00299-202ENST00000442956 IL17REQ8NFR9 667 aa18.75■□□□□ 0.59
LINC00299-202ENST00000442956 CLUAP1Q96AJ1 413 aa18.75■□□□□ 0.59
LINC00299-202ENST00000442956 NLRP2Q9NX02 1062 aa18.75■□□□□ 0.59
LINC00299-202ENST00000442956 HAP1P54257 671 aaPredicted RBP18.74■□□□□ 0.59
LINC00299-202ENST00000442956 MIS18AQ9NYP9 233 aa18.74■□□□□ 0.59
LINC00299-202ENST00000442956 NOB1Q9ULX3 412 aaKnown RBP18.74■□□□□ 0.59
LINC00299-202ENST00000442956 CSB-PGBD3P0DP91 1061 aa18.74■□□□□ 0.59
LINC00299-202ENST00000442956 AMOTQ4VCS5 1084 aa18.74■□□□□ 0.59
LINC00299-202ENST00000442956 KIF16BQ96L93 1317 aa18.74■□□□□ 0.59
LINC00299-202ENST00000442956 TSPYL4Q9UJ04 414 aa18.74■□□□□ 0.59
LINC00299-202ENST00000442956 ABCC6O95255 1503 aa18.73■□□□□ 0.59
LINC00299-202ENST00000442956 PRDM11Q9NQV5 511 aa18.73■□□□□ 0.59
LINC00299-202ENST00000442956 NHSL1Q5SYE7 1610 aa18.73■□□□□ 0.59
LINC00299-202ENST00000442956 ZNF530Q6P9A1 599 aaPredicted RBP18.73■□□□□ 0.59
LINC00299-202ENST00000442956 COL18A1P39060 1754 aa18.73■□□□□ 0.59
LINC00299-202ENST00000442956 CAMTA1Q9Y6Y1 1673 aa18.73■□□□□ 0.59
LINC00299-202ENST00000442956 TRIM27P14373 513 aa18.72■□□□□ 0.59
LINC00299-202ENST00000442956 KRT24Q2M2I5 525 aa18.72■□□□□ 0.59
LINC00299-202ENST00000442956 ATF7IPQ6VMQ6 1270 aa18.72■□□□□ 0.59
LINC00299-202ENST00000442956 FTSJ3Q8IY81 847 aaKnown RBP18.72■□□□□ 0.59
LINC00299-202ENST00000442956 RGPD5Q99666 1765 aa18.72■□□□□ 0.59
LINC00299-202ENST00000442956 MS4A1P11836 297 aa18.72■□□□□ 0.59
LINC00299-202ENST00000442956 BRPF1P55201 1214 aaPredicted RBP18.72■□□□□ 0.59
LINC00299-202ENST00000442956 DZIP1LQ8IYY4 767 aaKnown RBP18.72■□□□□ 0.59
LINC00299-202ENST00000442956 IPO8O15397 1037 aaKnown RBP18.71■□□□□ 0.59
LINC00299-202ENST00000442956 AKAP4Q5JQC9 854 aa18.71■□□□□ 0.58
LINC00299-202ENST00000442956 MRPL50Q8N5N7 158 aaKnown RBP18.71■□□□□ 0.58
LINC00299-202ENST00000442956 LMO7Q8WWI1 1683 aa18.7■□□□□ 0.58
LINC00299-202ENST00000442956 TCERG1O14776 1098 aaKnown RBP18.7■□□□□ 0.58
LINC00299-202ENST00000442956 RAPGEF4Q8WZA2 1011 aa18.7■□□□□ 0.58
LINC00299-202ENST00000442956 LRRC37A3O60309 1634 aa18.7■□□□□ 0.58
LINC00299-202ENST00000442956 TAF7Q15545 349 aaPredicted RBP18.69■□□□□ 0.58
LINC00299-202ENST00000442956 C1orf141Q5JVX7 400 aa18.69■□□□□ 0.58
LINC00299-202ENST00000442956 CEMIPQ8WUJ3 1361 aa18.69■□□□□ 0.58
LINC00299-202ENST00000442956 MVPQ14764 893 aaKnown RBP18.68■□□□□ 0.58
LINC00299-202ENST00000442956 LGR6Q9HBX8 967 aa18.68■□□□□ 0.58
LINC00299-202ENST00000442956 BABAM1Q9NWV8 329 aa18.67■□□□□ 0.58
LINC00299-202ENST00000442956 ROBO1Q9Y6N7 1651 aa18.66■□□□□ 0.58
LINC00299-202ENST00000442956 TATP17735 454 aaPredicted RBP18.66■□□□□ 0.58
LINC00299-202ENST00000442956 MPRIPQ6WCQ1 1025 aa18.66■□□□□ 0.58
LINC00299-202ENST00000442956 AAMPQ13685 434 aa18.65■□□□□ 0.58
LINC00299-202ENST00000442956 TSHZ2Q9NRE2 1034 aa18.65■□□□□ 0.58
LINC00299-202ENST00000442956 KDM2BQ8NHM5 1336 aa18.65■□□□□ 0.58
LINC00299-202ENST00000442956 ARHGAP45Q92619 1136 aa18.65■□□□□ 0.58
LINC00299-202ENST00000442956 WDR17Q8IZU2 1322 aa18.64■□□□□ 0.58
LINC00299-202ENST00000442956 FAM208AQ9UK61 1670 aaKnown RBP18.64■□□□□ 0.57
LINC00299-202ENST00000442956 MEGF6O75095 1541 aa18.64■□□□□ 0.57
LINC00299-202ENST00000442956 RNMTO43148 476 aaKnown RBP18.63■□□□□ 0.57
LINC00299-202ENST00000442956 TEFQ10587 303 aa18.63■□□□□ 0.57
LINC00299-202ENST00000442956 CENPQQ7L2Z9 268 aaPredicted RBP18.63■□□□□ 0.57
LINC00299-202ENST00000442956 ITPRIPQ8IWB1 547 aa18.63■□□□□ 0.57
LINC00299-202ENST00000442956 TMEM57Q8N5G2 664 aa18.63■□□□□ 0.57
LINC00299-202ENST00000442956 ABCA3Q99758 1704 aa18.63■□□□□ 0.57
LINC00299-202ENST00000442956 AHDC1Q5TGY3 1603 aaPredicted RBP18.63■□□□□ 0.57
LINC00299-202ENST00000442956 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.63■□□□□ 0.57
LINC00299-202ENST00000442956 COL5A2P05997 1499 aaPredicted RBP18.62■□□□□ 0.57
LINC00299-202ENST00000442956 SPG7Q9UQ90 795 aa18.62■□□□□ 0.57
LINC00299-202ENST00000442956 TOM1L2Q6ZVM7 507 aa18.62■□□□□ 0.57
LINC00299-202ENST00000442956 DDX19BQ9UMR2 479 aa18.62■□□□□ 0.57
LINC00299-202ENST00000442956 PLEKHG2Q9H7P9 1386 aa18.6■□□□□ 0.57
LINC00299-202ENST00000442956 OVOS2A0A0G2JMS6 1433 aa18.6■□□□□ 0.57
LINC00299-202ENST00000442956 API5Q9BZZ5 524 aaKnown RBP18.6■□□□□ 0.57
LINC00299-202ENST00000442956 STRN4Q9NRL3 753 aa18.6■□□□□ 0.57
LINC00299-202ENST00000442956 BTBD11A6QL63 1104 aa18.58■□□□□ 0.57
LINC00299-202ENST00000442956 TOM1O60784 492 aa18.58■□□□□ 0.57
LINC00299-202ENST00000442956 SLC4A2P04920 1241 aa18.58■□□□□ 0.57
LINC00299-202ENST00000442956 PHKG2P15735 406 aa18.58■□□□□ 0.57
LINC00299-202ENST00000442956 EVA1CP58658 441 aa18.58■□□□□ 0.57
LINC00299-202ENST00000442956 PCDHB15Q9Y5E8 787 aa18.58■□□□□ 0.57
LINC00299-202ENST00000442956 ABCC4O15439 1325 aa18.58■□□□□ 0.56
LINC00299-202ENST00000442956 SOS1Q07889 1333 aaPredicted RBP18.58■□□□□ 0.56
LINC00299-202ENST00000442956 IGHDP01880 384 aa18.57■□□□□ 0.56
LINC00299-202ENST00000442956 IFNL2Q8IZJ0 200 aa18.57■□□□□ 0.56
LINC00299-202ENST00000442956 CARD10Q9BWT7 1032 aa18.57■□□□□ 0.56
LINC00299-202ENST00000442956 PIP4K2BP78356 416 aa18.57■□□□□ 0.56
LINC00299-202ENST00000442956 LARP1Q6PKG0 1096 aaKnown RBP18.57■□□□□ 0.56
LINC00299-202ENST00000442956 EIF4A1P60842 406 aaKnown RBP18.56■□□□□ 0.56
LINC00299-202ENST00000442956 CYP27B1O15528 508 aa18.56■□□□□ 0.56
LINC00299-202ENST00000442956 KCNQ3O43525 872 aa18.56■□□□□ 0.56
LINC00299-202ENST00000442956 CCDC30Q5VVM6 783 aa18.56■□□□□ 0.56
LINC00299-202ENST00000442956 STK31Q9BXU1 1019 aa18.56■□□□□ 0.56
LINC00299-202ENST00000442956 ZBTB40Q9NUA8 1239 aa18.55■□□□□ 0.56
LINC00299-202ENST00000442956 BTG4Q9NY30 223 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms