RNA–Protein interactions for RNA: ENST00000442500.6

LINC00454-203, long intergenic non-protein coding RNA 454, humanhuman

TSL 5

Gene LINC00454, Length 809 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00454-203ENST00000442500 EXOC5O00471 708 aa17.44■□□□□ 0.38
LINC00454-203ENST00000442500 NUDCQ9Y266 331 aa17.44■□□□□ 0.38
LINC00454-203ENST00000442500 BCL9O00512 1426 aa17.44■□□□□ 0.38
LINC00454-203ENST00000442500 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.43■□□□□ 0.38
LINC00454-203ENST00000442500 U2SURPO15042 1029 aaKnown RBP17.42■□□□□ 0.38
LINC00454-203ENST00000442500 PDE3BQ13370 1112 aa17.42■□□□□ 0.38
LINC00454-203ENST00000442500 SBF2Q86WG5 1849 aa17.42■□□□□ 0.38
LINC00454-203ENST00000442500 MARCH10Q8NA82 808 aaPredicted RBP17.41■□□□□ 0.38
LINC00454-203ENST00000442500 ZCRB1Q8TBF4 217 aaKnown RBP17.41■□□□□ 0.38
LINC00454-203ENST00000442500 HMOX1P09601 288 aa17.4■□□□□ 0.38
LINC00454-203ENST00000442500 U2AF1L5P0DN76 240 aaPredicted RBP17.39■□□□□ 0.37
LINC00454-203ENST00000442500 U2AF1Q01081 240 aaKnown RBP eCLIP17.39■□□□□ 0.37
LINC00454-203ENST00000442500 RSPH6AQ9H0K4 717 aa17.39■□□□□ 0.37
LINC00454-203ENST00000442500 PCDH11XQ9BZA7 1347 aa17.39■□□□□ 0.37
LINC00454-203ENST00000442500 PCDH11YQ9BZA8 1340 aa17.39■□□□□ 0.37
LINC00454-203ENST00000442500 FCHSD2O94868 740 aa17.38■□□□□ 0.37
LINC00454-203ENST00000442500 SPG7Q9UQ90 795 aa17.38■□□□□ 0.37
LINC00454-203ENST00000442500 CYP27B1O15528 508 aa17.37■□□□□ 0.37
LINC00454-203ENST00000442500 AMOTQ4VCS5 1084 aa17.37■□□□□ 0.37
LINC00454-203ENST00000442500 FAM182BQ5T319 152 aa17.37■□□□□ 0.37
LINC00454-203ENST00000442500 DIEXFQ68CQ4 756 aaKnown RBP17.37■□□□□ 0.37
LINC00454-203ENST00000442500 FAM196AQ6ZSG2 479 aa17.37■□□□□ 0.37
LINC00454-203ENST00000442500 TNS1Q9HBL0 1735 aaKnown RBP17.36■□□□□ 0.37
LINC00454-203ENST00000442500 CCDC184Q52MB2 194 aa17.36■□□□□ 0.37
LINC00454-203ENST00000442500 PLEKHO1Q53GL0 409 aaPredicted RBP17.36■□□□□ 0.37
LINC00454-203ENST00000442500 NHSQ6T4R5 1651 aa17.36■□□□□ 0.37
LINC00454-203ENST00000442500 DOT1LQ8TEK3 1739 aa17.35■□□□□ 0.37
LINC00454-203ENST00000442500 PRKAR2BP31323 418 aa17.35■□□□□ 0.37
LINC00454-203ENST00000442500 DDX54Q8TDD1 881 aaKnown RBP17.35■□□□□ 0.37
LINC00454-203ENST00000442500 TOGARAM1Q9Y4F4 1720 aa17.35■□□□□ 0.37
LINC00454-203ENST00000442500 NKX1-1Q15270 411 aaPredicted RBP17.34■□□□□ 0.37
LINC00454-203ENST00000442500 VIRMAQ69YN4 1812 aaKnown RBP17.34■□□□□ 0.37
LINC00454-203ENST00000442500 KAT6BQ8WYB5 2073 aa17.34■□□□□ 0.37
LINC00454-203ENST00000442500 ADAMTS7Q9UKP4 1686 aa17.33■□□□□ 0.37
LINC00454-203ENST00000442500 PHKG2P15735 406 aa17.33■□□□□ 0.36
LINC00454-203ENST00000442500 PLEKHF1Q96S99 279 aa17.33■□□□□ 0.36
LINC00454-203ENST00000442500 WDR43Q15061 677 aaKnown RBP eCLIP17.32■□□□□ 0.36
LINC00454-203ENST00000442500 ZNF530Q6P9A1 599 aaPredicted RBP17.32■□□□□ 0.36
LINC00454-203ENST00000442500 IFNL2Q8IZJ0 200 aa17.32■□□□□ 0.36
LINC00454-203ENST00000442500 MRS2Q9HD23 443 aa17.32■□□□□ 0.36
LINC00454-203ENST00000442500 SCN11AQ9UI33 1791 aa17.32■□□□□ 0.36
LINC00454-203ENST00000442500 ITGB4P16144 1822 aa17.31■□□□□ 0.36
LINC00454-203ENST00000442500 MTHFSDQ2M296 383 aaKnown RBP17.31■□□□□ 0.36
LINC00454-203ENST00000442500 PHACTR3Q96KR7 559 aa17.31■□□□□ 0.36
LINC00454-203ENST00000442500 PNNQ9H307 717 aaKnown RBP17.31■□□□□ 0.36
LINC00454-203ENST00000442500 DLG5Q8TDM6 1919 aa17.3■□□□□ 0.36
LINC00454-203ENST00000442500 GAS2L2Q8NHY3 880 aa17.3■□□□□ 0.36
LINC00454-203ENST00000442500 PNISRQ8TF01 805 aaKnown RBP17.3■□□□□ 0.36
LINC00454-203ENST00000442500 UPF1Q92900 1129 aaKnown RBP eCLIP17.3■□□□□ 0.36
LINC00454-203ENST00000442500 ADAMTS8Q9UP79 889 aa17.3■□□□□ 0.36
LINC00454-203ENST00000442500 KDM6AO15550 1401 aaPredicted RBP17.3■□□□□ 0.36
LINC00454-203ENST00000442500 BTAF1O14981 1849 aa17.29■□□□□ 0.36
LINC00454-203ENST00000442500 CCER2I3L3R5 266 aa17.29■□□□□ 0.36
LINC00454-203ENST00000442500 HSP90AB1P08238 724 aaKnown RBP17.29■□□□□ 0.36
LINC00454-203ENST00000442500 AKAP4Q5JQC9 854 aa17.29■□□□□ 0.36
LINC00454-203ENST00000442500 C1orf141Q5JVX7 400 aa17.29■□□□□ 0.36
LINC00454-203ENST00000442500 CCDC125Q86Z20 511 aa17.29■□□□□ 0.36
LINC00454-203ENST00000442500 RGPD3A6NKT7 1758 aaPredicted RBP17.28■□□□□ 0.36
LINC00454-203ENST00000442500 RGPD4Q7Z3J3 1758 aa17.28■□□□□ 0.36
LINC00454-203ENST00000442500 SOCS7O14512 581 aa17.28■□□□□ 0.36
LINC00454-203ENST00000442500 MRC1P22897 1456 aa17.27■□□□□ 0.36
LINC00454-203ENST00000442500 TRIM37O94972 964 aa17.27■□□□□ 0.36
LINC00454-203ENST00000442500 DCAF5Q96JK2 942 aa17.27■□□□□ 0.36
LINC00454-203ENST00000442500 BCL11BQ9C0K0 894 aaPredicted RBP17.27■□□□□ 0.36
LINC00454-203ENST00000442500 MAP3K5Q99683 1374 aa17.27■□□□□ 0.35
LINC00454-203ENST00000442500 KCNQ2O43526 872 aa17.25■□□□□ 0.35
LINC00454-203ENST00000442500 NEFMP07197 916 aa17.25■□□□□ 0.35
LINC00454-203ENST00000442500 ACSBG1Q96GR2 724 aa17.25■□□□□ 0.35
LINC00454-203ENST00000442500 MAPK8IP3Q9UPT6 1336 aa17.24■□□□□ 0.35
LINC00454-203ENST00000442500 PTF1AQ7RTS3 328 aa17.24■□□□□ 0.35
LINC00454-203ENST00000442500 MIER1Q8N108 512 aa17.24■□□□□ 0.35
LINC00454-203ENST00000442500 RUNDC1Q96C34 613 aa17.24■□□□□ 0.35
LINC00454-203ENST00000442500 SIPA1L3O60292 1781 aaPredicted RBP17.24■□□□□ 0.35
LINC00454-203ENST00000442500 GNAT3A8MTJ3 354 aa17.23■□□□□ 0.35
LINC00454-203ENST00000442500 ERVV-2B6SEH9 535 aa17.23■□□□□ 0.35
LINC00454-203ENST00000442500 PRIM1P49642 420 aaKnown RBP17.23■□□□□ 0.35
LINC00454-203ENST00000442500 NFE2L2Q16236 605 aa17.23■□□□□ 0.35
LINC00454-203ENST00000442500 CEMIPQ8WUJ3 1361 aa17.23■□□□□ 0.35
LINC00454-203ENST00000442500 MPRIPQ6WCQ1 1025 aa17.22■□□□□ 0.35
LINC00454-203ENST00000442500 CCDC146Q8IYE0 955 aa17.22■□□□□ 0.35
LINC00454-203ENST00000442500 RNMTO43148 476 aaKnown RBP17.21■□□□□ 0.35
LINC00454-203ENST00000442500 HTATSF1O43719 755 aaKnown RBP17.21■□□□□ 0.35
LINC00454-203ENST00000442500 SF3B2Q13435 895 aaKnown RBP17.21■□□□□ 0.35
LINC00454-203ENST00000442500 LY75O60449 1722 aa17.21■□□□□ 0.35
LINC00454-203ENST00000442500 RREB1Q92766 1687 aa17.2■□□□□ 0.34
LINC00454-203ENST00000442500 TMPOP42166 694 aaKnown RBP17.2■□□□□ 0.34
LINC00454-203ENST00000442500 LGR6Q9HBX8 967 aa17.2■□□□□ 0.34
LINC00454-203ENST00000442500 PAPPAQ13219 1627 aa17.2■□□□□ 0.34
LINC00454-203ENST00000442500 PLSCR1O15162 318 aa17.19■□□□□ 0.34
LINC00454-203ENST00000442500 APBA3O96018 575 aa17.19■□□□□ 0.34
LINC00454-203ENST00000442500 BAG6P46379 1132 aa17.19■□□□□ 0.34
LINC00454-203ENST00000442500 IL17REQ8NFR9 667 aa17.19■□□□□ 0.34
LINC00454-203ENST00000442500 PIGBQ92521 554 aa17.19■□□□□ 0.34
LINC00454-203ENST00000442500 SYTL4Q96C24 671 aaPredicted RBP17.19■□□□□ 0.34
LINC00454-203ENST00000442500 TMOD3Q9NYL9 352 aa17.19■□□□□ 0.34
LINC00454-203ENST00000442500 CABP4P57796 275 aa17.17■□□□□ 0.34
LINC00454-203ENST00000442500 DEFB132Q7Z7B7 95 aa17.17■□□□□ 0.34
LINC00454-203ENST00000442500 SLC52A2Q9HAB3 445 aa17.17■□□□□ 0.34
LINC00454-203ENST00000442500 RIPK4P57078 832 aa17.16■□□□□ 0.34
LINC00454-203ENST00000442500 RTF1Q92541 710 aaKnown RBP17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms