RNA–Protein interactions for RNA: ENST00000442010.2

HMGB3P22-201, Transcript of high mobility group box 3 pseudogene 22, humanhuman

TSL 2 BASIC

Gene HMGB3P22, Length 597 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-201ENST00000442010 NCAPD2Q15021 1401 aa26.09■■□□□ 1.77
HMGB3P22-201ENST00000442010 DOT1LQ8TEK3 1739 aa26.08■■□□□ 1.77
HMGB3P22-201ENST00000442010 DDX54Q8TDD1 881 aaKnown RBP26.08■■□□□ 1.77
HMGB3P22-201ENST00000442010 POLKQ9UBT6 870 aa26.08■■□□□ 1.77
HMGB3P22-201ENST00000442010 WASHC2AQ641Q2 1341 aa26.08■■□□□ 1.77
HMGB3P22-201ENST00000442010 ZCRB1Q8TBF4 217 aaKnown RBP26.07■■□□□ 1.76
HMGB3P22-201ENST00000442010 TXNRD1Q16881 649 aa26.06■■□□□ 1.76
HMGB3P22-201ENST00000442010 ANO8Q9HCE9 1232 aaPredicted RBP26.05■■□□□ 1.76
HMGB3P22-201ENST00000442010 KIF7Q2M1P5 1343 aa26.05■■□□□ 1.76
HMGB3P22-201ENST00000442010 NSD2O96028 1365 aa26.05■■□□□ 1.76
HMGB3P22-201ENST00000442010 PKD1L3Q7Z443 1732 aa26.04■■□□□ 1.76
HMGB3P22-201ENST00000442010 CASZ1Q86V15 1759 aa26.04■■□□□ 1.76
HMGB3P22-201ENST00000442010 PAPPAQ13219 1627 aa26.03■■□□□ 1.76
HMGB3P22-201ENST00000442010 PPM1GO15355 546 aaPredicted RBP26.02■■□□□ 1.76
HMGB3P22-201ENST00000442010 RAPGEF4Q8WZA2 1011 aa26.02■■□□□ 1.76
HMGB3P22-201ENST00000442010 TATP17735 454 aaPredicted RBP26■■□□□ 1.75
HMGB3P22-201ENST00000442010 LY75O60449 1722 aa26■■□□□ 1.75
HMGB3P22-201ENST00000442010 TNNT2P45379 298 aaPredicted RBP25.99■■□□□ 1.75
HMGB3P22-201ENST00000442010 EYA1Q99502 592 aa25.98■■□□□ 1.75
HMGB3P22-201ENST00000442010 PRIM1P49642 420 aaKnown RBP25.97■■□□□ 1.75
HMGB3P22-201ENST00000442010 ITGB4P16144 1822 aa25.95■■□□□ 1.75
HMGB3P22-201ENST00000442010 PCDH11XQ9BZA7 1347 aa25.95■■□□□ 1.75
HMGB3P22-201ENST00000442010 PCDH11YQ9BZA8 1340 aa25.95■■□□□ 1.75
HMGB3P22-201ENST00000442010 TOGARAM1Q9Y4F4 1720 aa25.95■■□□□ 1.74
HMGB3P22-201ENST00000442010 EIF4A2Q14240 407 aaKnown RBP25.95■■□□□ 1.74
HMGB3P22-201ENST00000442010 AMER1Q5JTC6 1135 aaPredicted RBP25.95■■□□□ 1.74
HMGB3P22-201ENST00000442010 KNSTRNQ9Y448 316 aa25.95■■□□□ 1.74
HMGB3P22-201ENST00000442010 SLC15A2Q16348 729 aa25.94■■□□□ 1.74
HMGB3P22-201ENST00000442010 CYP27B1O15528 508 aa25.93■■□□□ 1.74
HMGB3P22-201ENST00000442010 PDGFDQ9GZP0 370 aaPredicted RBP25.93■■□□□ 1.74
HMGB3P22-201ENST00000442010 LRRC4BQ9NT99 713 aa25.93■■□□□ 1.74
HMGB3P22-201ENST00000442010 PER1O15534 1290 aaPredicted RBP25.92■■□□□ 1.74
HMGB3P22-201ENST00000442010 MORC1Q86VD1 984 aa25.92■■□□□ 1.74
HMGB3P22-201ENST00000442010 STK32BQ9NY57 414 aa25.92■■□□□ 1.74
HMGB3P22-201ENST00000442010 SYTL4Q96C24 671 aaPredicted RBP25.91■■□□□ 1.74
HMGB3P22-201ENST00000442010 QSER1Q2KHR3 1735 aa25.9■■□□□ 1.74
HMGB3P22-201ENST00000442010 IGSF1Q8N6C5 1336 aa25.88■■□□□ 1.73
HMGB3P22-201ENST00000442010 SLC27A3Q5K4L6 730 aa25.88■■□□□ 1.73
HMGB3P22-201ENST00000442010 SPON1Q9HCB6 807 aa25.88■■□□□ 1.73
HMGB3P22-201ENST00000442010 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.88■■□□□ 1.73
HMGB3P22-201ENST00000442010 TUBGCP6Q96RT7 1819 aa25.88■■□□□ 1.73
HMGB3P22-201ENST00000442010 NKX1-1Q15270 411 aaPredicted RBP25.87■■□□□ 1.73
HMGB3P22-201ENST00000442010 PLEKHG2Q9H7P9 1386 aa25.86■■□□□ 1.73
HMGB3P22-201ENST00000442010 ZNF827Q17R98 1081 aa25.86■■□□□ 1.73
HMGB3P22-201ENST00000442010 SPG7Q9UQ90 795 aa25.85■■□□□ 1.73
HMGB3P22-201ENST00000442010 AKT1S1Q96B36 256 aa25.84■■□□□ 1.73
HMGB3P22-201ENST00000442010 TAF1LQ8IZX4 1826 aa25.84■■□□□ 1.73
HMGB3P22-201ENST00000442010 KCNQ4P56696 695 aa25.82■■□□□ 1.72
HMGB3P22-201ENST00000442010 ZBTB7AO95365 584 aa25.8■■□□□ 1.72
HMGB3P22-201ENST00000442010 C5P01031 1676 aa25.8■■□□□ 1.72
HMGB3P22-201ENST00000442010 NPC1L1Q9UHC9 1359 aa25.8■■□□□ 1.72
HMGB3P22-201ENST00000442010 PHKG2P15735 406 aa25.79■■□□□ 1.72
HMGB3P22-201ENST00000442010 PTGER2P43116 358 aa25.79■■□□□ 1.72
HMGB3P22-201ENST00000442010 MPRIPQ6WCQ1 1025 aa25.79■■□□□ 1.72
HMGB3P22-201ENST00000442010 COL24A1Q17RW2 1714 aa25.79■■□□□ 1.72
HMGB3P22-201ENST00000442010 IL13P35225 146 aa25.78■■□□□ 1.72
HMGB3P22-201ENST00000442010 IFNL2Q8IZJ0 200 aa25.78■■□□□ 1.72
HMGB3P22-201ENST00000442010 CCNL1Q9UK58 526 aaPredicted RBP25.78■■□□□ 1.72
HMGB3P22-201ENST00000442010 CC2D1BQ5T0F9 858 aaKnown RBP25.76■■□□□ 1.71
HMGB3P22-201ENST00000442010 AEBP1Q8IUX7 1158 aa25.76■■□□□ 1.71
HMGB3P22-201ENST00000442010 PIGBQ92521 554 aa25.76■■□□□ 1.71
HMGB3P22-201ENST00000442010 SGIP1Q9BQI5 828 aa25.76■■□□□ 1.71
HMGB3P22-201ENST00000442010 MTFR1LQ9H019 292 aa25.76■■□□□ 1.71
HMGB3P22-201ENST00000442010 KDRP35968 1356 aa25.76■■□□□ 1.71
HMGB3P22-201ENST00000442010 PALLDQ8WX93 1383 aa25.76■■□□□ 1.71
HMGB3P22-201ENST00000442010 MTHFSP49914 203 aa25.75■■□□□ 1.71
HMGB3P22-201ENST00000442010 ATF5Q9Y2D1 282 aaPredicted RBP25.75■■□□□ 1.71
HMGB3P22-201ENST00000442010 PNPLA7Q6ZV29 1317 aa25.74■■□□□ 1.71
HMGB3P22-201ENST00000442010 PPP1R1BQ9UD71 204 aaPredicted RBP25.73■■□□□ 1.71
HMGB3P22-201ENST00000442010 PLEKHO1Q53GL0 409 aaPredicted RBP25.71■■□□□ 1.71
HMGB3P22-201ENST00000442010 SULT6B1Q6IMI4 303 aa25.71■■□□□ 1.71
HMGB3P22-201ENST00000442010 AMOTQ4VCS5 1084 aa25.7■■□□□ 1.7
HMGB3P22-201ENST00000442010 SMARCC1Q92922 1105 aaPredicted RBP25.7■■□□□ 1.7
HMGB3P22-201ENST00000442010 TFCP2L1Q9NZI6 479 aa25.7■■□□□ 1.7
HMGB3P22-201ENST00000442010 VIRMAQ69YN4 1812 aaKnown RBP25.69■■□□□ 1.7
HMGB3P22-201ENST00000442010 C4BP0C0L5 1744 aa25.68■■□□□ 1.7
HMGB3P22-201ENST00000442010 SLC16A10Q8TF71 515 aa25.68■■□□□ 1.7
HMGB3P22-201ENST00000442010 TMOD3Q9NYL9 352 aa25.68■■□□□ 1.7
HMGB3P22-201ENST00000442010 KDM6AO15550 1401 aaPredicted RBP25.68■■□□□ 1.7
HMGB3P22-201ENST00000442010 UBR3Q6ZT12 1888 aa25.68■■□□□ 1.7
HMGB3P22-201ENST00000442010 COL3A1P02461 1466 aaPredicted RBP25.67■■□□□ 1.7
HMGB3P22-201ENST00000442010 SCN11AQ9UI33 1791 aa25.67■■□□□ 1.7
HMGB3P22-201ENST00000442010 ZNF530Q6P9A1 599 aaPredicted RBP25.66■■□□□ 1.7
HMGB3P22-201ENST00000442010 DCAF5Q96JK2 942 aa25.66■■□□□ 1.7
HMGB3P22-201ENST00000442010 ERVV-2B6SEH9 535 aa25.65■■□□□ 1.7
HMGB3P22-201ENST00000442010 HSP90AB1P08238 724 aaKnown RBP25.65■■□□□ 1.7
HMGB3P22-201ENST00000442010 ASAP1Q9ULH1 1129 aa25.65■■□□□ 1.7
HMGB3P22-201ENST00000442010 ZNF831Q5JPB2 1677 aa25.64■■□□□ 1.7
HMGB3P22-201ENST00000442010 HMGB2P26583 209 aaKnown RBP25.63■■□□□ 1.69
HMGB3P22-201ENST00000442010 COL23A1Q86Y22 540 aaPredicted RBP25.63■■□□□ 1.69
HMGB3P22-201ENST00000442010 ATG3Q9NT62 314 aa25.63■■□□□ 1.69
HMGB3P22-201ENST00000442010 LOC102724428A0A0B4J2F2 783 aa25.62■■□□□ 1.69
HMGB3P22-201ENST00000442010 DIAPH1O60610 1272 aaKnown RBP25.62■■□□□ 1.69
HMGB3P22-201ENST00000442010 SIK1P57059 783 aa25.62■■□□□ 1.69
HMGB3P22-201ENST00000442010 CNGB1Q14028 1251 aaPredicted RBP25.6■■□□□ 1.69
HMGB3P22-201ENST00000442010 FHDC1Q9C0D6 1143 aaPredicted RBP25.6■■□□□ 1.69
HMGB3P22-201ENST00000442010 HMOX1P09601 288 aa25.59■■□□□ 1.69
HMGB3P22-201ENST00000442010 ARXQ96QS3 562 aa25.59■■□□□ 1.69
HMGB3P22-201ENST00000442010 SYT17Q9BSW7 474 aa25.59■■□□□ 1.69
HMGB3P22-201ENST00000442010 COL5A3P25940 1745 aaPredicted RBP25.58■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms