RNA–Protein interactions for RNA: ENST00000441983.5

TRAPPC12-210, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-210ENST00000441983 EXOC5O00471 708 aa20.22■□□□□ 0.83
TRAPPC12-210ENST00000441983 SULT6B1Q6IMI4 303 aa20.22■□□□□ 0.83
TRAPPC12-210ENST00000441983 U2SURPO15042 1029 aaKnown RBP20.21■□□□□ 0.83
TRAPPC12-210ENST00000441983 PDE3BQ13370 1112 aa20.21■□□□□ 0.83
TRAPPC12-210ENST00000441983 KRT27Q7Z3Y8 459 aa20.21■□□□□ 0.83
TRAPPC12-210ENST00000441983 PCDH11XQ9BZA7 1347 aa20.21■□□□□ 0.83
TRAPPC12-210ENST00000441983 PCDH11YQ9BZA8 1340 aa20.21■□□□□ 0.83
TRAPPC12-210ENST00000441983 AMOTQ4VCS5 1084 aa20.2■□□□□ 0.82
TRAPPC12-210ENST00000441983 SBF2Q86WG5 1849 aa20.19■□□□□ 0.82
TRAPPC12-210ENST00000441983 FCHSD2O94868 740 aa20.19■□□□□ 0.82
TRAPPC12-210ENST00000441983 ZCRB1Q8TBF4 217 aaKnown RBP20.19■□□□□ 0.82
TRAPPC12-210ENST00000441983 PNNQ9H307 717 aaKnown RBP20.19■□□□□ 0.82
TRAPPC12-210ENST00000441983 SPG7Q9UQ90 795 aa20.19■□□□□ 0.82
TRAPPC12-210ENST00000441983 U2AF1L5P0DN76 240 aaPredicted RBP20.18■□□□□ 0.82
TRAPPC12-210ENST00000441983 U2AF1Q01081 240 aaKnown RBP eCLIP20.18■□□□□ 0.822e-6■□□□□ 9.2
TRAPPC12-210ENST00000441983 AEBP1Q8IUX7 1158 aa20.18■□□□□ 0.82
TRAPPC12-210ENST00000441983 RSPH6AQ9H0K4 717 aa20.17■□□□□ 0.82
TRAPPC12-210ENST00000441983 NHSQ6T4R5 1651 aa20.16■□□□□ 0.82
TRAPPC12-210ENST00000441983 WDR43Q15061 677 aaKnown RBP eCLIP20.16■□□□□ 0.82
TRAPPC12-210ENST00000441983 PLEKHO1Q53GL0 409 aaPredicted RBP20.16■□□□□ 0.82
TRAPPC12-210ENST00000441983 VIRMAQ69YN4 1812 aaKnown RBP20.16■□□□□ 0.82
TRAPPC12-210ENST00000441983 CCER2I3L3R5 266 aa20.15■□□□□ 0.82
TRAPPC12-210ENST00000441983 HMOX1P09601 288 aa20.15■□□□□ 0.82
TRAPPC12-210ENST00000441983 DOT1LQ8TEK3 1739 aa20.15■□□□□ 0.82
TRAPPC12-210ENST00000441983 ADAMTS7Q9UKP4 1686 aa20.14■□□□□ 0.81
TRAPPC12-210ENST00000441983 FAM196AQ6ZSG2 479 aa20.14■□□□□ 0.81
TRAPPC12-210ENST00000441983 MRS2Q9HD23 443 aa20.13■□□□□ 0.81
TRAPPC12-210ENST00000441983 SCN11AQ9UI33 1791 aa20.13■□□□□ 0.81
TRAPPC12-210ENST00000441983 NEFMP07197 916 aa20.12■□□□□ 0.81
TRAPPC12-210ENST00000441983 MARCH10Q8NA82 808 aaPredicted RBP20.12■□□□□ 0.81
TRAPPC12-210ENST00000441983 TNS1Q9HBL0 1735 aaKnown RBP20.12■□□□□ 0.81
TRAPPC12-210ENST00000441983 RGPD3A6NKT7 1758 aaPredicted RBP20.11■□□□□ 0.81
TRAPPC12-210ENST00000441983 RGPD4Q7Z3J3 1758 aa20.11■□□□□ 0.81
TRAPPC12-210ENST00000441983 TOGARAM1Q9Y4F4 1720 aa20.11■□□□□ 0.81
TRAPPC12-210ENST00000441983 HSP90AB1P08238 724 aaKnown RBP20.11■□□□□ 0.81
TRAPPC12-210ENST00000441983 PRKAR2BP31323 418 aa20.11■□□□□ 0.81
TRAPPC12-210ENST00000441983 ILDR2Q71H61 639 aa20.11■□□□□ 0.81
TRAPPC12-210ENST00000441983 IFNL2Q8IZJ0 200 aa20.11■□□□□ 0.81
TRAPPC12-210ENST00000441983 GAS2L2Q8NHY3 880 aa20.11■□□□□ 0.81
TRAPPC12-210ENST00000441983 NKX1-1Q15270 411 aaPredicted RBP20.1■□□□□ 0.81
TRAPPC12-210ENST00000441983 DLG5Q8TDM6 1919 aa20.1■□□□□ 0.81
TRAPPC12-210ENST00000441983 PHKG2P15735 406 aa20.09■□□□□ 0.81
TRAPPC12-210ENST00000441983 ITGB4P16144 1822 aa20.09■□□□□ 0.81
TRAPPC12-210ENST00000441983 MAPK8IP3Q9UPT6 1336 aa20.08■□□□□ 0.81
TRAPPC12-210ENST00000441983 CYP27B1O15528 508 aa20.08■□□□□ 0.81
TRAPPC12-210ENST00000441983 AKAP4Q5JQC9 854 aa20.08■□□□□ 0.81
TRAPPC12-210ENST00000441983 PNISRQ8TF01 805 aaKnown RBP20.08■□□□□ 0.81
TRAPPC12-210ENST00000441983 PLEKHF1Q96S99 279 aa20.08■□□□□ 0.81
TRAPPC12-210ENST00000441983 C1orf141Q5JVX7 400 aa20.07■□□□□ 0.8
TRAPPC12-210ENST00000441983 ZNF530Q6P9A1 599 aaPredicted RBP20.07■□□□□ 0.8
TRAPPC12-210ENST00000441983 DDX54Q8TDD1 881 aaKnown RBP20.07■□□□□ 0.8
TRAPPC12-210ENST00000441983 CCDC184Q52MB2 194 aa20.06■□□□□ 0.8
TRAPPC12-210ENST00000441983 CCDC125Q86Z20 511 aa20.06■□□□□ 0.8
TRAPPC12-210ENST00000441983 ADAMTS8Q9UP79 889 aa20.06■□□□□ 0.8
TRAPPC12-210ENST00000441983 MRC1P22897 1456 aa20.05■□□□□ 0.8
TRAPPC12-210ENST00000441983 MTHFSDQ2M296 383 aaKnown RBP20.05■□□□□ 0.8
TRAPPC12-210ENST00000441983 RUNDC1Q96C34 613 aa20.05■□□□□ 0.8
TRAPPC12-210ENST00000441983 DCAF5Q96JK2 942 aa20.05■□□□□ 0.8
TRAPPC12-210ENST00000441983 MAP3K5Q99683 1374 aa20.05■□□□□ 0.8
TRAPPC12-210ENST00000441983 BTAF1O14981 1849 aa20.04■□□□□ 0.8
TRAPPC12-210ENST00000441983 SIPA1L3O60292 1781 aaPredicted RBP20.03■□□□□ 0.8
TRAPPC12-210ENST00000441983 KDM6AO15550 1401 aaPredicted RBP20.03■□□□□ 0.8
TRAPPC12-210ENST00000441983 PHACTR3Q96KR7 559 aa20.03■□□□□ 0.8
TRAPPC12-210ENST00000441983 HTATSF1O43719 755 aaKnown RBP20.02■□□□□ 0.8
TRAPPC12-210ENST00000441983 GNAT3A8MTJ3 354 aa20.01■□□□□ 0.79
TRAPPC12-210ENST00000441983 ERVV-2B6SEH9 535 aa20.01■□□□□ 0.79
TRAPPC12-210ENST00000441983 BCL11BQ9C0K0 894 aaPredicted RBP20.01■□□□□ 0.79
TRAPPC12-210ENST00000441983 KAT6BQ8WYB5 2073 aa20.01■□□□□ 0.79
TRAPPC12-210ENST00000441983 NFE2L2Q16236 605 aa20■□□□□ 0.79
TRAPPC12-210ENST00000441983 FAM182BQ5T319 152 aa20■□□□□ 0.79
TRAPPC12-210ENST00000441983 PAPPAQ13219 1627 aa19.99■□□□□ 0.79
TRAPPC12-210ENST00000441983 CEMIPQ8WUJ3 1361 aa19.99■□□□□ 0.79
TRAPPC12-210ENST00000441983 NCBP3Q53F19 620 aaKnown RBP19.99■□□□□ 0.79
TRAPPC12-210ENST00000441983 MIER1Q8N108 512 aa19.99■□□□□ 0.79
TRAPPC12-210ENST00000441983 LY75O60449 1722 aa19.99■□□□□ 0.79
TRAPPC12-210ENST00000441983 LMOD3Q0VAK6 560 aa19.98■□□□□ 0.79
TRAPPC12-210ENST00000441983 ZNF831Q5JPB2 1677 aa19.97■□□□□ 0.79
TRAPPC12-210ENST00000441983 SF3B2Q13435 895 aaKnown RBP19.97■□□□□ 0.79
TRAPPC12-210ENST00000441983 RTF1Q92541 710 aaKnown RBP19.96■□□□□ 0.79
TRAPPC12-210ENST00000441983 UPF1Q92900 1129 aaKnown RBP eCLIP19.96■□□□□ 0.79
TRAPPC12-210ENST00000441983 RREB1Q92766 1687 aa19.96■□□□□ 0.79
TRAPPC12-210ENST00000441983 CICQ96RK0 1608 aaPredicted RBP19.95■□□□□ 0.78
TRAPPC12-210ENST00000441983 RNMTO43148 476 aaKnown RBP19.95■□□□□ 0.78
TRAPPC12-210ENST00000441983 TRIM37O94972 964 aa19.95■□□□□ 0.78
TRAPPC12-210ENST00000441983 TMPOP42166 694 aaKnown RBP19.95■□□□□ 0.78
TRAPPC12-210ENST00000441983 NGEFQ8N5V2 710 aa19.95■□□□□ 0.78
TRAPPC12-210ENST00000441983 UBR2Q8IWV8 1755 aa19.94■□□□□ 0.78
TRAPPC12-210ENST00000441983 SOCS7O14512 581 aa19.94■□□□□ 0.78
TRAPPC12-210ENST00000441983 MPRIPQ6WCQ1 1025 aa19.94■□□□□ 0.78
TRAPPC12-210ENST00000441983 CCDC146Q8IYE0 955 aa19.94■□□□□ 0.78
TRAPPC12-210ENST00000441983 TMOD3Q9NYL9 352 aa19.94■□□□□ 0.78
TRAPPC12-210ENST00000441983 PRIM1P49642 420 aaKnown RBP19.93■□□□□ 0.78
TRAPPC12-210ENST00000441983 ACSBG1Q96GR2 724 aa19.93■□□□□ 0.78
TRAPPC12-210ENST00000441983 PLSCR1O15162 318 aa19.92■□□□□ 0.78
TRAPPC12-210ENST00000441983 BAG6P46379 1132 aa19.92■□□□□ 0.78
TRAPPC12-210ENST00000441983 FAM9BQ8IZU0 186 aa19.92■□□□□ 0.78
TRAPPC12-210ENST00000441983 SLC52A2Q9HAB3 445 aa19.92■□□□□ 0.78
TRAPPC12-210ENST00000441983 KCNQ2O43526 872 aa19.91■□□□□ 0.78
TRAPPC12-210ENST00000441983 HMGB2P26583 209 aaKnown RBP19.91■□□□□ 0.78
TRAPPC12-210ENST00000441983 RIPK4P57078 832 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms