RNA–Protein interactions for RNA: ENST00000441738.1

TIMP1-203, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 5

Gene TIMP1, Length 341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-203ENST00000441738 NBPF6Q5VWK0 638 aa11.32□□□□□ -0.6
TIMP1-203ENST00000441738 TOM1L2Q6ZVM7 507 aa11.32□□□□□ -0.6
TIMP1-203ENST00000441738 NBPF4Q96M43 638 aa11.32□□□□□ -0.6
TIMP1-203ENST00000441738 OVOS2A0A0G2JMS6 1433 aa11.32□□□□□ -0.6
TIMP1-203ENST00000441738 TRIM37O94972 964 aa11.31□□□□□ -0.6
TIMP1-203ENST00000441738 KNSTRNQ9Y448 316 aa11.31□□□□□ -0.6
TIMP1-203ENST00000441738 LY75O60449 1722 aa11.3□□□□□ -0.6
TIMP1-203ENST00000441738 AMPHP49418 695 aa11.3□□□□□ -0.6
TIMP1-203ENST00000441738 CC2D1BQ5T0F9 858 aaKnown RBP11.3□□□□□ -0.6
TIMP1-203ENST00000441738 USHBP1Q8N6Y0 703 aa11.3□□□□□ -0.6
TIMP1-203ENST00000441738 LTV1Q96GA3 475 aaPredicted RBP11.3□□□□□ -0.6
TIMP1-203ENST00000441738 ADAMTS7Q9UKP4 1686 aa11.3□□□□□ -0.6
TIMP1-203ENST00000441738 SCN11AQ9UI33 1791 aa11.29□□□□□ -0.6
TIMP1-203ENST00000441738 BCL9O00512 1426 aa11.29□□□□□ -0.6
TIMP1-203ENST00000441738 ZEB1P37275 1124 aaPredicted RBP11.29□□□□□ -0.6
TIMP1-203ENST00000441738 EIF4A2Q14240 407 aaKnown RBP11.29□□□□□ -0.6
TIMP1-203ENST00000441738 MARCH10Q8NA82 808 aaPredicted RBP11.29□□□□□ -0.6
TIMP1-203ENST00000441738 NLRP2Q9NX02 1062 aa11.29□□□□□ -0.6
TIMP1-203ENST00000441738 CEP350Q5VT06 3117 aa11.29□□□□□ -0.6
TIMP1-203ENST00000441738 CSB-PGBD3P0DP91 1061 aa11.28□□□□□ -0.6
TIMP1-203ENST00000441738 FAM196AQ6ZSG2 479 aa11.28□□□□□ -0.6
TIMP1-203ENST00000441738 PTF1AQ7RTS3 328 aa11.28□□□□□ -0.6
TIMP1-203ENST00000441738 MORC1Q86VD1 984 aa11.28□□□□□ -0.6
TIMP1-203ENST00000441738 IGSF1Q8N6C5 1336 aa11.28□□□□□ -0.6
TIMP1-203ENST00000441738 TUBGCP6Q96RT7 1819 aa11.28□□□□□ -0.6
TIMP1-203ENST00000441738 DLG5Q8TDM6 1919 aa11.27□□□□□ -0.6
TIMP1-203ENST00000441738 EYA1Q99502 592 aa11.27□□□□□ -0.61
TIMP1-203ENST00000441738 KAT6BQ8WYB5 2073 aa11.27□□□□□ -0.61
TIMP1-203ENST00000441738 PAPPAQ13219 1627 aa11.27□□□□□ -0.61
TIMP1-203ENST00000441738 KDRP35968 1356 aa11.27□□□□□ -0.61
TIMP1-203ENST00000441738 SIPA1L3O60292 1781 aaPredicted RBP11.26□□□□□ -0.61
TIMP1-203ENST00000441738 TAF1LQ8IZX4 1826 aa11.25□□□□□ -0.61
TIMP1-203ENST00000441738 PPM1GO15355 546 aaPredicted RBP11.25□□□□□ -0.61
TIMP1-203ENST00000441738 IL2RBP14784 551 aa11.25□□□□□ -0.61
TIMP1-203ENST00000441738 IL13P35225 146 aa11.25□□□□□ -0.61
TIMP1-203ENST00000441738 UTRNP46939 3433 aa11.25□□□□□ -0.61
TIMP1-203ENST00000441738 MTHFSP49914 203 aa11.24□□□□□ -0.61
TIMP1-203ENST00000441738 DDX10Q13206 875 aaKnown RBP11.24□□□□□ -0.61
TIMP1-203ENST00000441738 DDB1Q16531 1140 aa11.24□□□□□ -0.61
TIMP1-203ENST00000441738 AEBP1Q8IUX7 1158 aa11.24□□□□□ -0.61
TIMP1-203ENST00000441738 PPP2R1AP30153 589 aa11.23□□□□□ -0.61
TIMP1-203ENST00000441738 CNGB1Q14028 1251 aaPredicted RBP11.23□□□□□ -0.61
TIMP1-203ENST00000441738 SYT17Q9BSW7 474 aa11.23□□□□□ -0.61
TIMP1-203ENST00000441738 CDCA7Q9BWT1 371 aaPredicted RBP11.23□□□□□ -0.61
TIMP1-203ENST00000441738 FHDC1Q9C0D6 1143 aaPredicted RBP11.22□□□□□ -0.61
TIMP1-203ENST00000441738 PLEKHG2Q9H7P9 1386 aa11.21□□□□□ -0.61
TIMP1-203ENST00000441738 CYP27B1O15528 508 aa11.21□□□□□ -0.61
TIMP1-203ENST00000441738 PDE3BQ13370 1112 aa11.21□□□□□ -0.61
TIMP1-203ENST00000441738 CASZ1Q86V15 1759 aa11.21□□□□□ -0.62
TIMP1-203ENST00000441738 QSER1Q2KHR3 1735 aa11.21□□□□□ -0.62
TIMP1-203ENST00000441738 KDM6AO15550 1401 aaPredicted RBP11.2□□□□□ -0.62
TIMP1-203ENST00000441738 PTGER2P43116 358 aa11.2□□□□□ -0.62
TIMP1-203ENST00000441738 UBR2Q8IWV8 1755 aa11.2□□□□□ -0.62
TIMP1-203ENST00000441738 COL5A3P25940 1745 aaPredicted RBP11.2□□□□□ -0.62
TIMP1-203ENST00000441738 C5P01031 1676 aa11.2□□□□□ -0.62
TIMP1-203ENST00000441738 CICQ96RK0 1608 aaPredicted RBP11.2□□□□□ -0.62
TIMP1-203ENST00000441738 EXOC5O00471 708 aa11.19□□□□□ -0.62
TIMP1-203ENST00000441738 ZBTB7AO95365 584 aa11.19□□□□□ -0.62
TIMP1-203ENST00000441738 MRC1P22897 1456 aa11.19□□□□□ -0.62
TIMP1-203ENST00000441738 TJP1Q07157 1748 aa11.18□□□□□ -0.62
TIMP1-203ENST00000441738 ZNF831Q5JPB2 1677 aa11.18□□□□□ -0.62
TIMP1-203ENST00000441738 CHD4Q14839 1912 aa11.18□□□□□ -0.62
TIMP1-203ENST00000441738 HSPA6P17066 643 aa11.18□□□□□ -0.62
TIMP1-203ENST00000441738 ZNF316A6NFI3 1004 aaPredicted RBP11.17□□□□□ -0.62
TIMP1-203ENST00000441738 CAPN15O75808 1086 aa11.17□□□□□ -0.62
TIMP1-203ENST00000441738 ZCRB1Q8TBF4 217 aaKnown RBP11.17□□□□□ -0.62
TIMP1-203ENST00000441738 ATF5Q9Y2D1 282 aaPredicted RBP11.17□□□□□ -0.62
TIMP1-203ENST00000441738 COL24A1Q17RW2 1714 aa11.16□□□□□ -0.62
TIMP1-203ENST00000441738 SLC34A2O95436 690 aa11.16□□□□□ -0.62
TIMP1-203ENST00000441738 TATP17735 454 aaPredicted RBP11.16□□□□□ -0.62
TIMP1-203ENST00000441738 GPR162Q16538 588 aa11.16□□□□□ -0.62
TIMP1-203ENST00000441738 SULT6B1Q6IMI4 303 aa11.16□□□□□ -0.62
TIMP1-203ENST00000441738 PROM2Q8N271 834 aa11.16□□□□□ -0.62
TIMP1-203ENST00000441738 DDX54Q8TDD1 881 aaKnown RBP11.16□□□□□ -0.62
TIMP1-203ENST00000441738 RAPGEF4Q8WZA2 1011 aa11.16□□□□□ -0.62
TIMP1-203ENST00000441738 ACSBG1Q96GR2 724 aa11.16□□□□□ -0.62
TIMP1-203ENST00000441738 PDGFDQ9GZP0 370 aaPredicted RBP11.16□□□□□ -0.62
TIMP1-203ENST00000441738 PCDH11XQ9BZA7 1347 aa11.15□□□□□ -0.62
TIMP1-203ENST00000441738 PCDH11YQ9BZA8 1340 aa11.15□□□□□ -0.62
TIMP1-203ENST00000441738 UBR3Q6ZT12 1888 aa11.15□□□□□ -0.62
TIMP1-203ENST00000441738 DIAPH1O60610 1272 aaKnown RBP11.15□□□□□ -0.62
TIMP1-203ENST00000441738 HMOX1P09601 288 aa11.15□□□□□ -0.62
TIMP1-203ENST00000441738 NKX1-1Q15270 411 aaPredicted RBP11.15□□□□□ -0.62
TIMP1-203ENST00000441738 BCL11BQ9C0K0 894 aaPredicted RBP11.15□□□□□ -0.62
TIMP1-203ENST00000441738 ANO8Q9HCE9 1232 aaPredicted RBP11.15□□□□□ -0.62
TIMP1-203ENST00000441738 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.15□□□□□ -0.62
TIMP1-203ENST00000441738 PHKG2P15735 406 aa11.14□□□□□ -0.63
TIMP1-203ENST00000441738 PRKRIP1Q9H875 184 aaPredicted RBP11.14□□□□□ -0.63
TIMP1-203ENST00000441738 MYH14Q7Z406 1995 aaKnown RBP11.14□□□□□ -0.63
TIMP1-203ENST00000441738 KDM3BQ7LBC6 1761 aa11.13□□□□□ -0.63
TIMP1-203ENST00000441738 RSPH6AQ9H0K4 717 aa11.13□□□□□ -0.63
TIMP1-203ENST00000441738 C4BP0C0L5 1744 aa11.12□□□□□ -0.63
TIMP1-203ENST00000441738 MYBBP1AQ9BQG0 1328 aaKnown RBP11.11□□□□□ -0.63
TIMP1-203ENST00000441738 KCPQ6ZWJ8 1503 aa11.11□□□□□ -0.63
TIMP1-203ENST00000441738 PLSCR1O15162 318 aa11.11□□□□□ -0.63
TIMP1-203ENST00000441738 PRIM1P49642 420 aaKnown RBP11.11□□□□□ -0.63
TIMP1-203ENST00000441738 PRELPP51888 382 aa11.11□□□□□ -0.63
TIMP1-203ENST00000441738 RALBP1Q15311 655 aa11.11□□□□□ -0.63
TIMP1-203ENST00000441738 CCDC184Q52MB2 194 aa11.11□□□□□ -0.63
TIMP1-203ENST00000441738 PHACTR3Q96KR7 559 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 108.1 ms