RNA–Protein interactions for RNA: ENST00000441728.6

UBE2F-215, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 2

Gene UBE2F, Length 1,242 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-215ENST00000441728 PELP1Q8IZL8 1130 aaKnown RBP27.92■■■□□ 2.06
UBE2F-215ENST00000441728 RTL1A6NKG5 1358 aa27.91■■■□□ 2.06
UBE2F-215ENST00000441728 MSH5O43196 834 aa27.91■■■□□ 2.06
UBE2F-215ENST00000441728 TMF1P82094 1093 aa27.91■■■□□ 2.06
UBE2F-215ENST00000441728 RAPGEF4Q8WZA2 1011 aa27.91■■■□□ 2.06
UBE2F-215ENST00000441728 DOT1LQ8TEK3 1739 aa27.91■■■□□ 2.06
UBE2F-215ENST00000441728 FBLN1P23142 703 aa27.9■■■□□ 2.06
UBE2F-215ENST00000441728 CHD4Q14839 1912 aa27.89■■■□□ 2.06
UBE2F-215ENST00000441728 KCNQ4P56696 695 aa27.89■■■□□ 2.06
UBE2F-215ENST00000441728 CCNL1Q9UK58 526 aaPredicted RBP27.89■■■□□ 2.06
UBE2F-215ENST00000441728 USP47Q96K76 1375 aa27.88■■■□□ 2.05
UBE2F-215ENST00000441728 RRS1Q15050 365 aaKnown RBP27.88■■■□□ 2.05
UBE2F-215ENST00000441728 GGNBP2Q9H3C7 697 aa27.88■■■□□ 2.05
UBE2F-215ENST00000441728 PNPLA7Q6ZV29 1317 aa27.88■■■□□ 2.05
UBE2F-215ENST00000441728 QSER1Q2KHR3 1735 aa27.87■■■□□ 2.05
UBE2F-215ENST00000441728 CGNL1Q0VF96 1302 aa27.87■■■□□ 2.05
UBE2F-215ENST00000441728 TATP17735 454 aaPredicted RBP27.86■■■□□ 2.05
UBE2F-215ENST00000441728 MEGF6O75095 1541 aa27.86■■■□□ 2.05
UBE2F-215ENST00000441728 HMGB2P26583 209 aaKnown RBP27.85■■■□□ 2.05
UBE2F-215ENST00000441728 CDCA8Q53HL2 280 aa27.85■■■□□ 2.05
UBE2F-215ENST00000441728 RGPD2P0DJD1 1756 aa27.85■■■□□ 2.05
UBE2F-215ENST00000441728 USHBP1Q8N6Y0 703 aa27.84■■■□□ 2.05
UBE2F-215ENST00000441728 NBPF6Q5VWK0 638 aa27.83■■■□□ 2.05
UBE2F-215ENST00000441728 NBPF4Q96M43 638 aa27.83■■■□□ 2.05
UBE2F-215ENST00000441728 FYB1O15117 783 aa27.82■■■□□ 2.04
UBE2F-215ENST00000441728 LY75O60449 1722 aa27.81■■■□□ 2.04
UBE2F-215ENST00000441728 NSD2O96028 1365 aa27.8■■■□□ 2.04
UBE2F-215ENST00000441728 PCDH11XQ9BZA7 1347 aa27.79■■■□□ 2.04
UBE2F-215ENST00000441728 PCDH11YQ9BZA8 1340 aa27.79■■■□□ 2.04
UBE2F-215ENST00000441728 SHANK3Q9BYB0 1731 aa27.78■■■□□ 2.04
UBE2F-215ENST00000441728 TUBGCP6Q96RT7 1819 aa27.77■■■□□ 2.04
UBE2F-215ENST00000441728 INSRP06213 1382 aa27.76■■■□□ 2.03
UBE2F-215ENST00000441728 FLT4P35916 1363 aa27.76■■■□□ 2.03
UBE2F-215ENST00000441728 SENP3-EIF4A1A0A087X0R7 540 aa27.76■■■□□ 2.03
UBE2F-215ENST00000441728 HSP90AB2PQ58FF8 381 aa27.75■■■□□ 2.03
UBE2F-215ENST00000441728 KIF20BQ96Q89 1820 aa27.75■■■□□ 2.03
UBE2F-215ENST00000441728 MPRIPQ6WCQ1 1025 aa27.74■■■□□ 2.03
UBE2F-215ENST00000441728 COL23A1Q86Y22 540 aaPredicted RBP27.73■■■□□ 2.03
UBE2F-215ENST00000441728 FLAD1Q8NFF5 587 aa27.73■■■□□ 2.03
UBE2F-215ENST00000441728 NLGN2Q8NFZ4 835 aa27.73■■■□□ 2.03
UBE2F-215ENST00000441728 KIF24Q5T7B8 1368 aa27.73■■■□□ 2.03
UBE2F-215ENST00000441728 GRIN3BO60391 1043 aa27.72■■■□□ 2.03
UBE2F-215ENST00000441728 C1QTNF8P60827 252 aa27.72■■■□□ 2.03
UBE2F-215ENST00000441728 MSL1Q68DK7 614 aa27.72■■■□□ 2.03
UBE2F-215ENST00000441728 PPM1GO15355 546 aaPredicted RBP27.71■■■□□ 2.03
UBE2F-215ENST00000441728 COL24A1Q17RW2 1714 aa27.71■■■□□ 2.03
UBE2F-215ENST00000441728 PALLDQ8WX93 1383 aa27.71■■■□□ 2.03
UBE2F-215ENST00000441728 GIGYF1O75420 1035 aaPredicted RBP27.7■■■□□ 2.02
UBE2F-215ENST00000441728 SMARCC1Q92922 1105 aaPredicted RBP27.7■■■□□ 2.02
UBE2F-215ENST00000441728 AK7Q96M32 723 aa27.68■■■□□ 2.02
UBE2F-215ENST00000441728 C5P01031 1676 aa27.68■■■□□ 2.02
UBE2F-215ENST00000441728 SPG7Q9UQ90 795 aa27.66■■■□□ 2.02
UBE2F-215ENST00000441728 NSD3Q9BZ95 1437 aa27.66■■■□□ 2.02
UBE2F-215ENST00000441728 EMILIN1Q9Y6C2 1016 aa27.64■■■□□ 2.02
UBE2F-215ENST00000441728 CYP27B1O15528 508 aa27.63■■■□□ 2.01
UBE2F-215ENST00000441728 TRIM26Q12899 539 aaPredicted RBP27.62■■■□□ 2.01
UBE2F-215ENST00000441728 UTRNP46939 3433 aa27.62■■■□□ 2.01
UBE2F-215ENST00000441728 POLR3GLQ9BT43 218 aa27.61■■■□□ 2.01
UBE2F-215ENST00000441728 PHF14O94880 888 aa27.6■■■□□ 2.01
UBE2F-215ENST00000441728 YBX3P16989 372 aaKnown RBP eCLIP27.6■■■□□ 2.011e-6■■□□□ 11.6
UBE2F-215ENST00000441728 CD2APQ9Y5K6 639 aa27.6■■■□□ 2.01
UBE2F-215ENST00000441728 CARD14Q9BXL6 1004 aa27.59■■■□□ 2.01
UBE2F-215ENST00000441728 TMOD3Q9NYL9 352 aa27.58■■■□□ 2.01
UBE2F-215ENST00000441728 TAF1LQ8IZX4 1826 aa27.57■■■□□ 2
UBE2F-215ENST00000441728 C4BP0C0L5 1744 aa27.57■■■□□ 2
UBE2F-215ENST00000441728 PKD1L3Q7Z443 1732 aa27.56■■■□□ 2
UBE2F-215ENST00000441728 ITGB4P16144 1822 aa27.56■■■□□ 2
UBE2F-215ENST00000441728 PIGBQ92521 554 aa27.56■■■□□ 2
UBE2F-215ENST00000441728 WASHC2AQ641Q2 1341 aa27.54■■■□□ 2
UBE2F-215ENST00000441728 TOGARAM1Q9Y4F4 1720 aa27.54■■■□□ 2
UBE2F-215ENST00000441728 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.53■■■□□ 2
UBE2F-215ENST00000441728 LOC102724428A0A0B4J2F2 783 aa27.52■■■□□ 2
UBE2F-215ENST00000441728 SIK1P57059 783 aa27.52■■■□□ 2
UBE2F-215ENST00000441728 NKX1-1Q15270 411 aaPredicted RBP27.52■■■□□ 2
UBE2F-215ENST00000441728 IFNL2Q8IZJ0 200 aa27.52■■■□□ 2
UBE2F-215ENST00000441728 EYA1Q99502 592 aa27.52■■■□□ 2
UBE2F-215ENST00000441728 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.52■■■□□ 2
UBE2F-215ENST00000441728 SSFA2P28290 1259 aa27.51■■□□□ 1.99
UBE2F-215ENST00000441728 TIMELESSQ9UNS1 1208 aa27.5■■□□□ 1.99
UBE2F-215ENST00000441728 ATP6V1AP38606 617 aa27.49■■□□□ 1.99
UBE2F-215ENST00000441728 TNNT2P45379 298 aaPredicted RBP27.49■■□□□ 1.99
UBE2F-215ENST00000441728 MAP2P11137 1827 aaKnown RBP27.48■■□□□ 1.99
UBE2F-215ENST00000441728 GNPATO15228 680 aa27.48■■□□□ 1.99
UBE2F-215ENST00000441728 GPBP1L1Q9HC44 474 aaPredicted RBP27.48■■□□□ 1.99
UBE2F-215ENST00000441728 NCAPD2Q15021 1401 aa27.48■■□□□ 1.99
UBE2F-215ENST00000441728 ATP10DQ9P241 1426 aa27.48■■□□□ 1.99
UBE2F-215ENST00000441728 ANKRD26Q9UPS8 1709 aa27.47■■□□□ 1.99
UBE2F-215ENST00000441728 PHKG2P15735 406 aa27.47■■□□□ 1.99
UBE2F-215ENST00000441728 IGSF1Q8N6C5 1336 aa27.46■■□□□ 1.99
UBE2F-215ENST00000441728 LINC00116Q8NCU8 138 aa27.46■■□□□ 1.99
UBE2F-215ENST00000441728 POLKQ9UBT6 870 aa27.46■■□□□ 1.99
UBE2F-215ENST00000441728 WWC3Q9ULE0 1092 aa27.46■■□□□ 1.99
UBE2F-215ENST00000441728 ASAP1Q9ULH1 1129 aa27.46■■□□□ 1.99
UBE2F-215ENST00000441728 UBR3Q6ZT12 1888 aa27.46■■□□□ 1.99
UBE2F-215ENST00000441728 SMIM5Q71RC9 77 aa27.45■■□□□ 1.98
UBE2F-215ENST00000441728 AMIGO3Q86WK7 504 aa27.43■■□□□ 1.98
UBE2F-215ENST00000441728 ZNF526Q8TF50 670 aaPredicted RBP27.43■■□□□ 1.98
UBE2F-215ENST00000441728 EIF4A2Q14240 407 aaKnown RBP27.42■■□□□ 1.98
UBE2F-215ENST00000441728 HSP90AB1P08238 724 aaKnown RBP27.41■■□□□ 1.98
UBE2F-215ENST00000441728 ITPK1Q13572 414 aa27.4■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms