RNA–Protein interactions for RNA: ENST00000440925.1

PLOD3-205, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 4

Gene PLOD3, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-205ENST00000440925 TATP17735 454 aaPredicted RBP19.8■□□□□ 0.76
PLOD3-205ENST00000440925 OVOS2A0A0G2JMS6 1433 aa19.79■□□□□ 0.76
PLOD3-205ENST00000440925 CYP27B1O15528 508 aa19.79■□□□□ 0.76
PLOD3-205ENST00000440925 RAPGEF4Q8WZA2 1011 aa19.79■□□□□ 0.76
PLOD3-205ENST00000440925 APAF1O14727 1248 aa19.78■□□□□ 0.76
PLOD3-205ENST00000440925 SEPT12Q8IYM1 358 aa19.78■□□□□ 0.76
PLOD3-205ENST00000440925 ZCRB1Q8TBF4 217 aaKnown RBP19.78■□□□□ 0.76
PLOD3-205ENST00000440925 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.78■□□□□ 0.76
PLOD3-205ENST00000440925 RXRBP28702 533 aa19.77■□□□□ 0.76
PLOD3-205ENST00000440925 MARCH10Q8NA82 808 aaPredicted RBP19.77■□□□□ 0.76
PLOD3-205ENST00000440925 TMPOP42166 694 aaKnown RBP19.76■□□□□ 0.75
PLOD3-205ENST00000440925 PLEKHO1Q53GL0 409 aaPredicted RBP19.76■□□□□ 0.75
PLOD3-205ENST00000440925 PHF23Q9BUL5 403 aaPredicted RBP19.76■□□□□ 0.75
PLOD3-205ENST00000440925 RRP7AQ9Y3A4 280 aaKnown RBP19.76■□□□□ 0.75
PLOD3-205ENST00000440925 THSD7AQ9UPZ6 1657 aa19.75■□□□□ 0.75
PLOD3-205ENST00000440925 EXOC5O00471 708 aa19.75■□□□□ 0.75
PLOD3-205ENST00000440925 CDCA7Q9BWT1 371 aaPredicted RBP19.75■□□□□ 0.75
PLOD3-205ENST00000440925 TRIM35Q9UPQ4 493 aa19.75■□□□□ 0.75
PLOD3-205ENST00000440925 NFE2L2Q16236 605 aa19.74■□□□□ 0.75
PLOD3-205ENST00000440925 AMOTQ4VCS5 1084 aa19.74■□□□□ 0.75
PLOD3-205ENST00000440925 PHKG2P15735 406 aa19.73■□□□□ 0.75
PLOD3-205ENST00000440925 IL17REQ8NFR9 667 aa19.73■□□□□ 0.75
PLOD3-205ENST00000440925 DDX54Q8TDD1 881 aaKnown RBP19.73■□□□□ 0.75
PLOD3-205ENST00000440925 LGR6Q9HBX8 967 aa19.73■□□□□ 0.75
PLOD3-205ENST00000440925 WNK3Q9BYP7 1800 aa19.72■□□□□ 0.75
PLOD3-205ENST00000440925 NKX1-1Q15270 411 aaPredicted RBP19.72■□□□□ 0.75
PLOD3-205ENST00000440925 DDB1Q16531 1140 aa19.72■□□□□ 0.75
PLOD3-205ENST00000440925 FAM182BQ5T319 152 aa19.72■□□□□ 0.75
PLOD3-205ENST00000440925 SHANK3Q9BYB0 1731 aa19.72■□□□□ 0.75
PLOD3-205ENST00000440925 PNNQ9H307 717 aaKnown RBP19.72■□□□□ 0.75
PLOD3-205ENST00000440925 SPG7Q9UQ90 795 aa19.72■□□□□ 0.75
PLOD3-205ENST00000440925 ZNF530Q6P9A1 599 aaPredicted RBP19.71■□□□□ 0.75
PLOD3-205ENST00000440925 PKD1L3Q7Z443 1732 aa19.71■□□□□ 0.75
PLOD3-205ENST00000440925 PLEKHG2Q9H7P9 1386 aa19.7■□□□□ 0.74
PLOD3-205ENST00000440925 RIPK4P57078 832 aa19.7■□□□□ 0.74
PLOD3-205ENST00000440925 DCTN1Q14203 1278 aa19.7■□□□□ 0.74
PLOD3-205ENST00000440925 NEUROD2Q15784 382 aa19.7■□□□□ 0.74
PLOD3-205ENST00000440925 PARP4Q9UKK3 1724 aaKnown RBP19.69■□□□□ 0.74
PLOD3-205ENST00000440925 AKAP4Q5JQC9 854 aa19.69■□□□□ 0.74
PLOD3-205ENST00000440925 MPRIPQ6WCQ1 1025 aa19.69■□□□□ 0.74
PLOD3-205ENST00000440925 RGS12O14924 1447 aa19.68■□□□□ 0.74
PLOD3-205ENST00000440925 IFNL2Q8IZJ0 200 aa19.68■□□□□ 0.74
PLOD3-205ENST00000440925 GAS2L2Q8NHY3 880 aa19.68■□□□□ 0.74
PLOD3-205ENST00000440925 THUMPD2Q9BTF0 503 aaKnown RBP19.68■□□□□ 0.74
PLOD3-205ENST00000440925 SALL2Q9Y467 1007 aaPredicted RBP19.68■□□□□ 0.74
PLOD3-205ENST00000440925 LRRC37A3O60309 1634 aa19.68■□□□□ 0.74
PLOD3-205ENST00000440925 MCM10Q7L590 875 aa19.67■□□□□ 0.74
PLOD3-205ENST00000440925 MAPK8IP3Q9UPT6 1336 aa19.67■□□□□ 0.74
PLOD3-205ENST00000440925 TNS2Q63HR2 1409 aa19.67■□□□□ 0.74
PLOD3-205ENST00000440925 GNAT3A8MTJ3 354 aa19.66■□□□□ 0.74
PLOD3-205ENST00000440925 RNMTO43148 476 aaKnown RBP19.66■□□□□ 0.74
PLOD3-205ENST00000440925 NCBP3Q53F19 620 aaKnown RBP19.66■□□□□ 0.74
PLOD3-205ENST00000440925 PTF1AQ7RTS3 328 aa19.66■□□□□ 0.74
PLOD3-205ENST00000440925 ZNF521Q96K83 1311 aa19.66■□□□□ 0.74
PLOD3-205ENST00000440925 KDM6AO15550 1401 aaPredicted RBP19.66■□□□□ 0.74
PLOD3-205ENST00000440925 BRWD3Q6RI45 1802 aa19.65■□□□□ 0.74
PLOD3-205ENST00000440925 PCDH11XQ9BZA7 1347 aa19.65■□□□□ 0.74
PLOD3-205ENST00000440925 PCDH11YQ9BZA8 1340 aa19.65■□□□□ 0.74
PLOD3-205ENST00000440925 HTATSF1O43719 755 aaKnown RBP19.64■□□□□ 0.73
PLOD3-205ENST00000440925 PDE3BQ13370 1112 aa19.64■□□□□ 0.73
PLOD3-205ENST00000440925 CCDC27Q2M243 656 aa19.64■□□□□ 0.73
PLOD3-205ENST00000440925 KRT27Q7Z3Y8 459 aa19.64■□□□□ 0.73
PLOD3-205ENST00000440925 WWC1Q8IX03 1113 aa19.64■□□□□ 0.73
PLOD3-205ENST00000440925 DLG5Q8TDM6 1919 aa19.63■□□□□ 0.73
PLOD3-205ENST00000440925 CEMIPQ8WUJ3 1361 aa19.63■□□□□ 0.73
PLOD3-205ENST00000440925 MAP3K5Q99683 1374 aa19.63■□□□□ 0.73
PLOD3-205ENST00000440925 SPINK5Q9NQ38 1064 aaPredicted RBP19.63■□□□□ 0.73
PLOD3-205ENST00000440925 A0A0G2JS52 829 aa19.62■□□□□ 0.73
PLOD3-205ENST00000440925 KCNQ2O43526 872 aa19.62■□□□□ 0.73
PLOD3-205ENST00000440925 MYT1Q01538 1121 aa19.62■□□□□ 0.73
PLOD3-205ENST00000440925 C1orf141Q5JVX7 400 aa19.61■□□□□ 0.73
PLOD3-205ENST00000440925 DCAF5Q96JK2 942 aa19.61■□□□□ 0.73
PLOD3-205ENST00000440925 ADAMTS7Q9UKP4 1686 aa19.61■□□□□ 0.73
PLOD3-205ENST00000440925 NEFMP07197 916 aa19.6■□□□□ 0.73
PLOD3-205ENST00000440925 HNRNPUQ00839 825 aaKnown RBP eCLIP19.6■□□□□ 0.73
PLOD3-205ENST00000440925 PRIM1P49642 420 aaKnown RBP19.59■□□□□ 0.73
PLOD3-205ENST00000440925 ILDR2Q71H61 639 aa19.59■□□□□ 0.73
PLOD3-205ENST00000440925 NFATC2IPQ8NCF5 419 aa19.59■□□□□ 0.73
PLOD3-205ENST00000440925 ACSBG1Q96GR2 724 aa19.59■□□□□ 0.73
PLOD3-205ENST00000440925 BCL9O00512 1426 aa19.59■□□□□ 0.73
PLOD3-205ENST00000440925 ZNF853P0CG23 659 aa19.58■□□□□ 0.72
PLOD3-205ENST00000440925 MIS18AQ9NYP9 233 aa19.58■□□□□ 0.72
PLOD3-205ENST00000440925 TOGARAM1Q9Y4F4 1720 aa19.57■□□□□ 0.72
PLOD3-205ENST00000440925 ERVV-2B6SEH9 535 aa19.57■□□□□ 0.72
PLOD3-205ENST00000440925 PIGBQ92521 554 aa19.57■□□□□ 0.72
PLOD3-205ENST00000440925 CDCA7LQ96GN5 454 aa19.57■□□□□ 0.72
PLOD3-205ENST00000440925 KCNQ3O43525 872 aa19.56■□□□□ 0.72
PLOD3-205ENST00000440925 HSP90AB1P08238 724 aaKnown RBP19.56■□□□□ 0.72
PLOD3-205ENST00000440925 SLC52A2Q9HAB3 445 aa19.56■□□□□ 0.72
PLOD3-205ENST00000440925 WDR63Q8IWG1 891 aa19.55■□□□□ 0.72
PLOD3-205ENST00000440925 NGEFQ8N5V2 710 aa19.55■□□□□ 0.72
PLOD3-205ENST00000440925 RTF1Q92541 710 aaKnown RBP19.55■□□□□ 0.72
PLOD3-205ENST00000440925 YTHDC1Q96MU7 727 aaKnown RBP19.55■□□□□ 0.72
PLOD3-205ENST00000440925 CHL1O00533 1208 aa19.54■□□□□ 0.72
PLOD3-205ENST00000440925 FAM196AQ6ZSG2 479 aa19.54■□□□□ 0.72
PLOD3-205ENST00000440925 TRMT2AQ8IZ69 625 aaKnown RBP19.54■□□□□ 0.72
PLOD3-205ENST00000440925 SCN11AQ9UI33 1791 aa19.54■□□□□ 0.72
PLOD3-205ENST00000440925 TAF7Q15545 349 aaPredicted RBP19.53■□□□□ 0.72
PLOD3-205ENST00000440925 LMOD3Q0VAK6 560 aa19.52■□□□□ 0.72
PLOD3-205ENST00000440925 SLC39A6Q13433 755 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms