RNA–Protein interactions for RNA: ENST00000439649.7

GFRA1-204, Transcript of GDNF family receptor alpha 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene GFRA1, Length 9,216 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1-204ENST00000439649 KIF20AO95235 890 aa14.33□□□□□ -0.12
GFRA1-204ENST00000439649 PYM1Q9BRP8 204 aaKnown RBP14.33□□□□□ -0.12
GFRA1-204ENST00000439649 CCDC196A0A1B0GTZ2 297 aa14.32□□□□□ -0.12
GFRA1-204ENST00000439649 CCDC141Q6ZP82 1450 aa14.32□□□□□ -0.12
GFRA1-204ENST00000439649 TANGO6Q9C0B7 1094 aa14.32□□□□□ -0.12
GFRA1-204ENST00000439649 C6orf163Q5TEZ5 329 aa14.32□□□□□ -0.12
GFRA1-204ENST00000439649 EIF5P55010 431 aaKnown RBP14.32□□□□□ -0.12
GFRA1-204ENST00000439649 FOSBP53539 338 aa14.32□□□□□ -0.12
GFRA1-204ENST00000439649 PTPN14Q15678 1187 aa14.32□□□□□ -0.12
GFRA1-204ENST00000439649 SYTL4Q96C24 671 aaPredicted RBP14.32□□□□□ -0.12
GFRA1-204ENST00000439649 CCDC150Q8NCX0 1101 aa14.31□□□□□ -0.12
GFRA1-204ENST00000439649 PNISRQ8TF01 805 aaKnown RBP14.31□□□□□ -0.12
GFRA1-204ENST00000439649 SOGA3Q5TF21 947 aa14.31□□□□□ -0.12
GFRA1-204ENST00000439649 NEBLO76041 1014 aa14.31□□□□□ -0.12
GFRA1-204ENST00000439649 MINK1Q8N4C8 1332 aaPredicted RBP14.31□□□□□ -0.12
GFRA1-204ENST00000439649 PANK1Q8TE04 598 aa14.31□□□□□ -0.12
GFRA1-204ENST00000439649 FERMT1Q9BQL6 677 aa14.31□□□□□ -0.12
GFRA1-204ENST00000439649 ANKRD50Q9ULJ7 1429 aa14.31□□□□□ -0.12
GFRA1-204ENST00000439649 FKBP15Q5T1M5 1219 aa14.31□□□□□ -0.12
GFRA1-204ENST00000439649 SH2B1Q9NRF2 756 aaPredicted RBP14.3□□□□□ -0.12
GFRA1-204ENST00000439649 U3KPZ7 1027 aaPredicted RBP14.3□□□□□ -0.12
GFRA1-204ENST00000439649 SURF6O75683 361 aaKnown RBP14.3□□□□□ -0.12
GFRA1-204ENST00000439649 TNIP1Q15025 636 aa14.3□□□□□ -0.12
GFRA1-204ENST00000439649 UBAC1Q9BSL1 405 aa14.3□□□□□ -0.12
GFRA1-204ENST00000439649 MSH5O43196 834 aa14.3□□□□□ -0.12
GFRA1-204ENST00000439649 IFFO1Q0D2I5 559 aa14.29□□□□□ -0.12
GFRA1-204ENST00000439649 CETN1Q12798 172 aa14.29□□□□□ -0.12
GFRA1-204ENST00000439649 PLVAPQ9BX97 442 aa14.29□□□□□ -0.12
GFRA1-204ENST00000439649 CCDC183Q5T5S1 534 aa14.29□□□□□ -0.12
GFRA1-204ENST00000439649 CUL7Q14999 1698 aa14.29□□□□□ -0.12
GFRA1-204ENST00000439649 GAPVD1Q14C86 1478 aa14.29□□□□□ -0.12
GFRA1-204ENST00000439649 BLOC1S2Q6QNY1 142 aa14.29□□□□□ -0.12
GFRA1-204ENST00000439649 ANKS4BQ8N8V4 417 aa14.29□□□□□ -0.12
GFRA1-204ENST00000439649 IVLP07476 585 aa14.29□□□□□ -0.12
GFRA1-204ENST00000439649 CFAP100Q494V2 611 aa14.29□□□□□ -0.12
GFRA1-204ENST00000439649 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.29□□□□□ -0.12
GFRA1-204ENST00000439649 V9GYY5 206 aaPredicted RBP14.29□□□□□ -0.12
GFRA1-204ENST00000439649 GRIPAP1Q4V328 841 aa14.29□□□□□ -0.12
GFRA1-204ENST00000439649 CASKIN1Q8WXD9 1431 aa14.29□□□□□ -0.12
GFRA1-204ENST00000439649 FAM193AP78312 1265 aa14.28□□□□□ -0.12
GFRA1-204ENST00000439649 TTC39AQ5SRH9 613 aa14.28□□□□□ -0.12
GFRA1-204ENST00000439649 SEC63Q9UGP8 760 aaKnown RBP14.28□□□□□ -0.12
GFRA1-204ENST00000439649 FAM135AQ9P2D6 1515 aa14.28□□□□□ -0.12
GFRA1-204ENST00000439649 USO1O60763 962 aaKnown RBP14.28□□□□□ -0.12
GFRA1-204ENST00000439649 SKIDA1Q1XH10 827 aa14.28□□□□□ -0.12
GFRA1-204ENST00000439649 PTPRGP23470 1445 aa14.27□□□□□ -0.12
GFRA1-204ENST00000439649 WDR63Q8IWG1 891 aa14.27□□□□□ -0.12
GFRA1-204ENST00000439649 GSTTP1A0A1W2PQM5 241 aa14.27□□□□□ -0.13
GFRA1-204ENST00000439649 TUBB4AP04350 444 aa14.27□□□□□ -0.13
GFRA1-204ENST00000439649 HMGB1P09429 215 aaKnown RBP14.27□□□□□ -0.13
GFRA1-204ENST00000439649 ANO10Q9NW15 660 aa14.27□□□□□ -0.13
GFRA1-204ENST00000439649 CADPSQ9ULU8 1353 aa14.27□□□□□ -0.13
GFRA1-204ENST00000439649 CASQ1P31415 396 aa14.27□□□□□ -0.13
GFRA1-204ENST00000439649 DYNC1I1O14576 645 aa14.27□□□□□ -0.13
GFRA1-204ENST00000439649 ATF3P18847 181 aa14.27□□□□□ -0.13
GFRA1-204ENST00000439649 PPP4R3AQ6IN85 833 aa14.27□□□□□ -0.13
GFRA1-204ENST00000439649 TSG101Q99816 390 aa14.27□□□□□ -0.13
GFRA1-204ENST00000439649 SEPT11Q9NVA2 429 aaKnown RBP14.27□□□□□ -0.13
GFRA1-204ENST00000439649 STMN4Q9H169 189 aaPredicted RBP14.26□□□□□ -0.13
GFRA1-204ENST00000439649 PODXL2Q9NZ53 605 aa14.26□□□□□ -0.13
GFRA1-204ENST00000439649 TDRD9Q8NDG6 1382 aaKnown RBP14.26□□□□□ -0.13
GFRA1-204ENST00000439649 PAXBP1Q9Y5B6 917 aa14.26□□□□□ -0.13
GFRA1-204ENST00000439649 FYB1O15117 783 aa14.26□□□□□ -0.13
GFRA1-204ENST00000439649 PLEKHO1Q53GL0 409 aaPredicted RBP14.26□□□□□ -0.13
GFRA1-204ENST00000439649 PAFAH1B1P43034 410 aa14.25□□□□□ -0.13
GFRA1-204ENST00000439649 MYH10P35580 1976 aa14.25□□□□□ -0.13
GFRA1-204ENST00000439649 SYNJ2O15056 1496 aa14.25□□□□□ -0.13
GFRA1-204ENST00000439649 FAM114A1Q8IWE2 563 aa14.25□□□□□ -0.13
GFRA1-204ENST00000439649 BACH2Q9BYV9 841 aa14.25□□□□□ -0.13
GFRA1-204ENST00000439649 NKTRP30414 1462 aaKnown RBP14.25□□□□□ -0.13
GFRA1-204ENST00000439649 GOLIM4O00461 696 aa14.25□□□□□ -0.13
GFRA1-204ENST00000439649 BRPF3Q9ULD4 1205 aa14.25□□□□□ -0.13
GFRA1-204ENST00000439649 CEP112Q8N8E3 955 aa14.25□□□□□ -0.13
GFRA1-204ENST00000439649 DNAJC2Q99543 621 aaKnown RBP14.25□□□□□ -0.13
GFRA1-204ENST00000439649 CCDC172P0C7W6 258 aa14.24□□□□□ -0.13
GFRA1-204ENST00000439649 FSD2A1L4K1 749 aa14.24□□□□□ -0.13
GFRA1-204ENST00000439649 PRIMPOLQ96LW4 560 aa14.24□□□□□ -0.13
GFRA1-204ENST00000439649 TIAM1Q13009 1591 aa14.24□□□□□ -0.13
GFRA1-204ENST00000439649 ERICH4A6NGS2 130 aa14.24□□□□□ -0.13
GFRA1-204ENST00000439649 FANCD2Q9BXW9 1451 aa14.24□□□□□ -0.13
GFRA1-204ENST00000439649 FERP16591 822 aa14.24□□□□□ -0.13
GFRA1-204ENST00000439649 IFI16Q16666 785 aaKnown RBP14.24□□□□□ -0.13
GFRA1-204ENST00000439649 DNAAF4Q8WXU2 420 aa14.24□□□□□ -0.13
GFRA1-204ENST00000439649 NSRP1Q9H0G5 558 aaKnown RBP14.24□□□□□ -0.13
GFRA1-204ENST00000439649 NCOA2Q15596 1464 aa14.24□□□□□ -0.13
GFRA1-204ENST00000439649 MEX3CQ5U5Q3 659 aaKnown RBP14.23□□□□□ -0.13
GFRA1-204ENST00000439649 NECTIN2Q92692 538 aa14.23□□□□□ -0.13
GFRA1-204ENST00000439649 CNNM1Q9NRU3 951 aa14.23□□□□□ -0.13
GFRA1-204ENST00000439649 IKBKGQ9Y6K9 419 aa14.23□□□□□ -0.13
GFRA1-204ENST00000439649 CEBPZQ03701 1054 aaKnown RBP14.23□□□□□ -0.13
GFRA1-204ENST00000439649 TTC21AQ8NDW8 1320 aa14.23□□□□□ -0.13
GFRA1-204ENST00000439649 ATP2B1P20020 1258 aa14.23□□□□□ -0.13
GFRA1-204ENST00000439649 MPHOSPH8Q99549 860 aa14.23□□□□□ -0.13
GFRA1-204ENST00000439649 MVPQ14764 893 aaKnown RBP14.23□□□□□ -0.13
GFRA1-204ENST00000439649 ATF7IPQ6VMQ6 1270 aa14.23□□□□□ -0.13
GFRA1-204ENST00000439649 CTR9Q6PD62 1173 aa14.23□□□□□ -0.13
GFRA1-204ENST00000439649 FAM177A1Q8N128 213 aaPredicted RBP14.23□□□□□ -0.13
GFRA1-204ENST00000439649 TTC14Q96N46 770 aa14.22□□□□□ -0.13
GFRA1-204ENST00000439649 KIF14Q15058 1648 aa14.22□□□□□ -0.13
GFRA1-204ENST00000439649 YEATS4O95619 227 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms