RNA–Protein interactions for RNA: ENST00000439518.5

NCKIPSD-206, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 1 (best)

Gene NCKIPSD, Length 1,214 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-206ENST00000439518 SPON1Q9HCB6 807 aa28.08■■■□□ 2.09
NCKIPSD-206ENST00000439518 SHANK3Q9BYB0 1731 aa28.07■■■□□ 2.08
NCKIPSD-206ENST00000439518 STK32BQ9NY57 414 aa28.07■■■□□ 2.08
NCKIPSD-206ENST00000439518 SLC15A2Q16348 729 aa28.06■■■□□ 2.08
NCKIPSD-206ENST00000439518 RAPGEF4Q8WZA2 1011 aa28.06■■■□□ 2.08
NCKIPSD-206ENST00000439518 PDGFDQ9GZP0 370 aaPredicted RBP28.06■■■□□ 2.08
NCKIPSD-206ENST00000439518 CASZ1Q86V15 1759 aa28.06■■■□□ 2.08
NCKIPSD-206ENST00000439518 PRIM1P49642 420 aaKnown RBP28.04■■■□□ 2.08
NCKIPSD-206ENST00000439518 ANKRD26Q9UPS8 1709 aa28.04■■■□□ 2.08
NCKIPSD-206ENST00000439518 WASHC2AQ641Q2 1341 aa28.03■■■□□ 2.08
NCKIPSD-206ENST00000439518 TATP17735 454 aaPredicted RBP28.02■■■□□ 2.08
NCKIPSD-206ENST00000439518 PAPPAQ13219 1627 aa28.01■■■□□ 2.07
NCKIPSD-206ENST00000439518 PPM1GO15355 546 aaPredicted RBP28.01■■■□□ 2.07
NCKIPSD-206ENST00000439518 PANK3Q9H999 370 aa28.01■■■□□ 2.07
NCKIPSD-206ENST00000439518 LRRC4BQ9NT99 713 aa28.01■■■□□ 2.07
NCKIPSD-206ENST00000439518 POLKQ9UBT6 870 aa28.01■■■□□ 2.07
NCKIPSD-206ENST00000439518 NCAPD2Q15021 1401 aa28.01■■■□□ 2.07
NCKIPSD-206ENST00000439518 NSD2O96028 1365 aa28■■■□□ 2.07
NCKIPSD-206ENST00000439518 DOT1LQ8TEK3 1739 aa28■■■□□ 2.07
NCKIPSD-206ENST00000439518 SYTL4Q96C24 671 aaPredicted RBP27.99■■■□□ 2.07
NCKIPSD-206ENST00000439518 MAP2P11137 1827 aaKnown RBP27.98■■■□□ 2.07
NCKIPSD-206ENST00000439518 SLC27A3Q5K4L6 730 aa27.97■■■□□ 2.07
NCKIPSD-206ENST00000439518 ZBTB7AO95365 584 aa27.96■■■□□ 2.07
NCKIPSD-206ENST00000439518 PPP1R1BQ9UD71 204 aaPredicted RBP27.96■■■□□ 2.07
NCKIPSD-206ENST00000439518 PCDH11XQ9BZA7 1347 aa27.95■■■□□ 2.07
NCKIPSD-206ENST00000439518 PCDH11YQ9BZA8 1340 aa27.95■■■□□ 2.07
NCKIPSD-206ENST00000439518 ZNF827Q17R98 1081 aa27.94■■■□□ 2.06
NCKIPSD-206ENST00000439518 CYP27B1O15528 508 aa27.93■■■□□ 2.06
NCKIPSD-206ENST00000439518 PTGER2P43116 358 aa27.93■■■□□ 2.06
NCKIPSD-206ENST00000439518 TNNT2P45379 298 aaPredicted RBP27.93■■■□□ 2.06
NCKIPSD-206ENST00000439518 EYA1Q99502 592 aa27.93■■■□□ 2.06
NCKIPSD-206ENST00000439518 AKT1S1Q96B36 256 aa27.92■■■□□ 2.06
NCKIPSD-206ENST00000439518 ATF5Q9Y2D1 282 aaPredicted RBP27.91■■■□□ 2.06
NCKIPSD-206ENST00000439518 LY75O60449 1722 aa27.89■■■□□ 2.06
NCKIPSD-206ENST00000439518 PKD1L3Q7Z443 1732 aa27.89■■■□□ 2.06
NCKIPSD-206ENST00000439518 KCNQ4P56696 695 aa27.89■■■□□ 2.06
NCKIPSD-206ENST00000439518 EIF4A2Q14240 407 aaKnown RBP27.89■■■□□ 2.06
NCKIPSD-206ENST00000439518 MTFR1LQ9H019 292 aa27.89■■■□□ 2.06
NCKIPSD-206ENST00000439518 SGIP1Q9BQI5 828 aa27.87■■■□□ 2.05
NCKIPSD-206ENST00000439518 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.87■■■□□ 2.05
NCKIPSD-206ENST00000439518 SPG7Q9UQ90 795 aa27.86■■■□□ 2.05
NCKIPSD-206ENST00000439518 KIF7Q2M1P5 1343 aa27.86■■■□□ 2.05
NCKIPSD-206ENST00000439518 NKX1-1Q15270 411 aaPredicted RBP27.85■■■□□ 2.05
NCKIPSD-206ENST00000439518 MORC1Q86VD1 984 aa27.84■■■□□ 2.05
NCKIPSD-206ENST00000439518 CCNL1Q9UK58 526 aaPredicted RBP27.84■■■□□ 2.05
NCKIPSD-206ENST00000439518 KNSTRNQ9Y448 316 aa27.84■■■□□ 2.05
NCKIPSD-206ENST00000439518 QSER1Q2KHR3 1735 aa27.81■■■□□ 2.04
NCKIPSD-206ENST00000439518 TOGARAM1Q9Y4F4 1720 aa27.81■■■□□ 2.04
NCKIPSD-206ENST00000439518 MPRIPQ6WCQ1 1025 aa27.81■■■□□ 2.04
NCKIPSD-206ENST00000439518 PNPLA7Q6ZV29 1317 aa27.81■■■□□ 2.04
NCKIPSD-206ENST00000439518 IGSF1Q8N6C5 1336 aa27.81■■■□□ 2.04
NCKIPSD-206ENST00000439518 AMER1Q5JTC6 1135 aaPredicted RBP27.8■■■□□ 2.04
NCKIPSD-206ENST00000439518 TFCP2L1Q9NZI6 479 aa27.8■■■□□ 2.04
NCKIPSD-206ENST00000439518 PLEKHG2Q9H7P9 1386 aa27.8■■■□□ 2.04
NCKIPSD-206ENST00000439518 SLC16A10Q8TF71 515 aa27.79■■■□□ 2.04
NCKIPSD-206ENST00000439518 PALLDQ8WX93 1383 aa27.78■■■□□ 2.04
NCKIPSD-206ENST00000439518 ITGB4P16144 1822 aa27.77■■■□□ 2.04
NCKIPSD-206ENST00000439518 PIGBQ92521 554 aa27.77■■■□□ 2.04
NCKIPSD-206ENST00000439518 TUBGCP6Q96RT7 1819 aa27.76■■■□□ 2.04
NCKIPSD-206ENST00000439518 PHKG2P15735 406 aa27.76■■■□□ 2.03
NCKIPSD-206ENST00000439518 IFNL2Q8IZJ0 200 aa27.76■■■□□ 2.03
NCKIPSD-206ENST00000439518 SMARCC1Q92922 1105 aaPredicted RBP27.75■■■□□ 2.03
NCKIPSD-206ENST00000439518 FHDC1Q9C0D6 1143 aaPredicted RBP27.75■■■□□ 2.03
NCKIPSD-206ENST00000439518 PER1O15534 1290 aaPredicted RBP27.74■■■□□ 2.03
NCKIPSD-206ENST00000439518 ARXQ96QS3 562 aa27.74■■■□□ 2.03
NCKIPSD-206ENST00000439518 SYT17Q9BSW7 474 aa27.73■■■□□ 2.03
NCKIPSD-206ENST00000439518 HMGB2P26583 209 aaKnown RBP27.71■■■□□ 2.03
NCKIPSD-206ENST00000439518 COL24A1Q17RW2 1714 aa27.7■■■□□ 2.03
NCKIPSD-206ENST00000439518 C5P01031 1676 aa27.7■■■□□ 2.02
NCKIPSD-206ENST00000439518 DCAF8L1A6NGE4 600 aa27.69■■■□□ 2.02
NCKIPSD-206ENST00000439518 TMOD3Q9NYL9 352 aa27.69■■■□□ 2.02
NCKIPSD-206ENST00000439518 MAP3K5Q99683 1374 aa27.69■■■□□ 2.02
NCKIPSD-206ENST00000439518 COL23A1Q86Y22 540 aaPredicted RBP27.68■■■□□ 2.02
NCKIPSD-206ENST00000439518 AEBP1Q8IUX7 1158 aa27.68■■■□□ 2.02
NCKIPSD-206ENST00000439518 TAF1LQ8IZX4 1826 aa27.67■■■□□ 2.02
NCKIPSD-206ENST00000439518 IL13P35225 146 aa27.67■■■□□ 2.02
NCKIPSD-206ENST00000439518 PLEKHO1Q53GL0 409 aaPredicted RBP27.67■■■□□ 2.02
NCKIPSD-206ENST00000439518 ASAP1Q9ULH1 1129 aa27.66■■■□□ 2.02
NCKIPSD-206ENST00000439518 KDRP35968 1356 aa27.65■■■□□ 2.02
NCKIPSD-206ENST00000439518 POLD1P28340 1107 aa27.65■■■□□ 2.02
NCKIPSD-206ENST00000439518 AMOTQ4VCS5 1084 aa27.65■■■□□ 2.02
NCKIPSD-206ENST00000439518 LOC102724428A0A0B4J2F2 783 aa27.64■■■□□ 2.02
NCKIPSD-206ENST00000439518 SIK1P57059 783 aa27.64■■■□□ 2.02
NCKIPSD-206ENST00000439518 ERVV-2B6SEH9 535 aa27.63■■■□□ 2.01
NCKIPSD-206ENST00000439518 HSP90AB1P08238 724 aaKnown RBP27.63■■■□□ 2.01
NCKIPSD-206ENST00000439518 MTHFSP49914 203 aa27.63■■■□□ 2.01
NCKIPSD-206ENST00000439518 SULT6B1Q6IMI4 303 aa27.63■■■□□ 2.01
NCKIPSD-206ENST00000439518 ZNF530Q6P9A1 599 aaPredicted RBP27.63■■■□□ 2.01
NCKIPSD-206ENST00000439518 DCAF5Q96JK2 942 aa27.63■■■□□ 2.01
NCKIPSD-206ENST00000439518 C4BP0C0L5 1744 aa27.62■■■□□ 2.01
NCKIPSD-206ENST00000439518 MSH5O43196 834 aa27.62■■■□□ 2.01
NCKIPSD-206ENST00000439518 FLAD1Q8NFF5 587 aa27.62■■■□□ 2.01
NCKIPSD-206ENST00000439518 ATG3Q9NT62 314 aa27.62■■■□□ 2.01
NCKIPSD-206ENST00000439518 NPC1L1Q9UHC9 1359 aa27.6■■■□□ 2.01
NCKIPSD-206ENST00000439518 CC2D1BQ5T0F9 858 aaKnown RBP27.6■■■□□ 2.01
NCKIPSD-206ENST00000439518 KDM6AO15550 1401 aaPredicted RBP27.59■■■□□ 2.01
NCKIPSD-206ENST00000439518 YY1P25490 414 aa27.59■■■□□ 2.01
NCKIPSD-206ENST00000439518 AMIGO3Q86WK7 504 aa27.59■■■□□ 2.01
NCKIPSD-206ENST00000439518 AK7Q96M32 723 aa27.59■■■□□ 2.01
NCKIPSD-206ENST00000439518 ITPK1Q13572 414 aa27.58■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms