RNA–Protein interactions for RNA: ENST00000439445.5

CCDC66-207, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 709 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-207ENST00000439445 SLC12A5Q9H2X9 1139 aa13.94□□□□□ -0.18
CCDC66-207ENST00000439445 USP31Q70CQ4 1352 aa13.94□□□□□ -0.18
CCDC66-207ENST00000439445 SLC15A2Q16348 729 aa13.93□□□□□ -0.18
CCDC66-207ENST00000439445 ACSBG1Q96GR2 724 aa13.93□□□□□ -0.18
CCDC66-207ENST00000439445 SBNO2Q9Y2G9 1366 aa13.93□□□□□ -0.18
CCDC66-207ENST00000439445 ERBB3P21860 1342 aa13.92□□□□□ -0.18
CCDC66-207ENST00000439445 TNS2Q63HR2 1409 aa13.92□□□□□ -0.18
CCDC66-207ENST00000439445 CASZ1Q86V15 1759 aa13.92□□□□□ -0.18
CCDC66-207ENST00000439445 IL2RBP14784 551 aa13.92□□□□□ -0.18
CCDC66-207ENST00000439445 MNX1P50219 401 aaPredicted RBP13.92□□□□□ -0.18
CCDC66-207ENST00000439445 ANKRD24Q8TF21 1146 aa13.92□□□□□ -0.18
CCDC66-207ENST00000439445 TERF2IPQ9NYB0 399 aa13.92□□□□□ -0.18
CCDC66-207ENST00000439445 ABCC6O95255 1503 aa13.91□□□□□ -0.18
CCDC66-207ENST00000439445 CD163L1Q9NR16 1453 aa13.91□□□□□ -0.18
CCDC66-207ENST00000439445 PTGER2P43116 358 aa13.9□□□□□ -0.18
CCDC66-207ENST00000439445 LTN1O94822 1766 aa13.9□□□□□ -0.18
CCDC66-207ENST00000439445 MIER1Q8N108 512 aa13.89□□□□□ -0.19
CCDC66-207ENST00000439445 EDC4Q6P2E9 1401 aaKnown RBP13.89□□□□□ -0.19
CCDC66-207ENST00000439445 UTRNP46939 3433 aa13.88□□□□□ -0.19
CCDC66-207ENST00000439445 LTV1Q96GA3 475 aaPredicted RBP13.88□□□□□ -0.19
CCDC66-207ENST00000439445 MTFR1LQ9H019 292 aa13.88□□□□□ -0.19
CCDC66-207ENST00000439445 NHSQ6T4R5 1651 aa13.88□□□□□ -0.19
CCDC66-207ENST00000439445 USP54Q70EL1 1684 aa13.88□□□□□ -0.19
CCDC66-207ENST00000439445 TONSLQ96HA7 1378 aa13.87□□□□□ -0.19
CCDC66-207ENST00000439445 DDX54Q8TDD1 881 aaKnown RBP13.87□□□□□ -0.19
CCDC66-207ENST00000439445 IP6K1Q92551 441 aa13.87□□□□□ -0.19
CCDC66-207ENST00000439445 PUS7Q96PZ0 661 aaKnown RBP13.87□□□□□ -0.19
CCDC66-207ENST00000439445 FHDC1Q9C0D6 1143 aaPredicted RBP13.87□□□□□ -0.19
CCDC66-207ENST00000439445 A0A1W2PP64 1363 aa13.86□□□□□ -0.19
CCDC66-207ENST00000439445 MYOM1P52179 1685 aa13.86□□□□□ -0.19
CCDC66-207ENST00000439445 SYT17Q9BSW7 474 aa13.86□□□□□ -0.19
CCDC66-207ENST00000439445 BTAF1O14981 1849 aa13.85□□□□□ -0.19
CCDC66-207ENST00000439445 ST20-MTHFSA0A0A6YYL1 179 aa13.84□□□□□ -0.19
CCDC66-207ENST00000439445 PLCD3Q8N3E9 789 aa13.84□□□□□ -0.19
CCDC66-207ENST00000439445 COG3Q96JB2 828 aa13.84□□□□□ -0.19
CCDC66-207ENST00000439445 LRRC4BQ9NT99 713 aa13.84□□□□□ -0.19
CCDC66-207ENST00000439445 FBXO3Q9UK99 471 aa13.84□□□□□ -0.19
CCDC66-207ENST00000439445 FBLN1P23142 703 aa13.83□□□□□ -0.2
CCDC66-207ENST00000439445 AMPHP49418 695 aa13.83□□□□□ -0.2
CCDC66-207ENST00000439445 ZNF827Q17R98 1081 aa13.83□□□□□ -0.2
CCDC66-207ENST00000439445 SYTL4Q96C24 671 aaPredicted RBP13.83□□□□□ -0.2
CCDC66-207ENST00000439445 ARXQ96QS3 562 aa13.83□□□□□ -0.2
CCDC66-207ENST00000439445 SGIP1Q9BQI5 828 aa13.83□□□□□ -0.2
CCDC66-207ENST00000439445 GABBR2O75899 941 aa13.82□□□□□ -0.2
CCDC66-207ENST00000439445 TESK2Q96S53 571 aa13.82□□□□□ -0.2
CCDC66-207ENST00000439445 MAP3K19Q56UN5 1328 aa13.82□□□□□ -0.2
CCDC66-207ENST00000439445 GOLGB1Q14789 3259 aaKnown RBP13.81□□□□□ -0.2
CCDC66-207ENST00000439445 SLC24A1O60721 1099 aa13.81□□□□□ -0.2
CCDC66-207ENST00000439445 HOXC9P31274 260 aa13.81□□□□□ -0.2
CCDC66-207ENST00000439445 PRIM1P49642 420 aaKnown RBP13.81□□□□□ -0.2
CCDC66-207ENST00000439445 SLC27A3Q5K4L6 730 aa13.81□□□□□ -0.2
CCDC66-207ENST00000439445 ZCRB1Q8TBF4 217 aaKnown RBP13.8□□□□□ -0.2
CCDC66-207ENST00000439445 PAPPAQ13219 1627 aa13.79□□□□□ -0.2
CCDC66-207ENST00000439445 FAM208AQ9UK61 1670 aaKnown RBP13.79□□□□□ -0.2
CCDC66-207ENST00000439445 KCNQ4P56696 695 aa13.79□□□□□ -0.2
CCDC66-207ENST00000439445 ZNF579Q8NAF0 562 aaKnown RBP13.79□□□□□ -0.2
CCDC66-207ENST00000439445 SLC16A10Q8TF71 515 aa13.79□□□□□ -0.2
CCDC66-207ENST00000439445 CLCN6P51797 869 aa13.78□□□□□ -0.2
CCDC66-207ENST00000439445 KLHL34Q8N239 644 aa13.78□□□□□ -0.2
CCDC66-207ENST00000439445 ZNF784Q8NCA9 323 aaPredicted RBP13.78□□□□□ -0.2
CCDC66-207ENST00000439445 TFCP2L1Q9NZI6 479 aa13.78□□□□□ -0.2
CCDC66-207ENST00000439445 RGPD2P0DJD1 1756 aa13.77□□□□□ -0.21
CCDC66-207ENST00000439445 POLD1P28340 1107 aa13.77□□□□□ -0.21
CCDC66-207ENST00000439445 RRS1Q15050 365 aaKnown RBP13.77□□□□□ -0.21
CCDC66-207ENST00000439445 ANKRD36BQ8N2N9 1353 aa13.77□□□□□ -0.21
CCDC66-207ENST00000439445 FYB1O15117 783 aa13.76□□□□□ -0.21
CCDC66-207ENST00000439445 GPR162Q16538 588 aa13.76□□□□□ -0.21
CCDC66-207ENST00000439445 NBPF6Q5VWK0 638 aa13.76□□□□□ -0.21
CCDC66-207ENST00000439445 NBPF4Q96M43 638 aa13.76□□□□□ -0.21
CCDC66-207ENST00000439445 GGNBP2Q9H3C7 697 aa13.76□□□□□ -0.21
CCDC66-207ENST00000439445 CHD4Q14839 1912 aa13.76□□□□□ -0.21
CCDC66-207ENST00000439445 MAP3K5Q99683 1374 aa13.75□□□□□ -0.21
CCDC66-207ENST00000439445 PNPLA7Q6ZV29 1317 aa13.75□□□□□ -0.21
CCDC66-207ENST00000439445 TMF1P82094 1093 aa13.75□□□□□ -0.21
CCDC66-207ENST00000439445 USHBP1Q8N6Y0 703 aa13.75□□□□□ -0.21
CCDC66-207ENST00000439445 RAPGEF4Q8WZA2 1011 aa13.75□□□□□ -0.21
CCDC66-207ENST00000439445 ZBTB47Q9UFB7 747 aaPredicted RBP13.75□□□□□ -0.21
CCDC66-207ENST00000439445 PELP1Q8IZL8 1130 aaKnown RBP13.74□□□□□ -0.21
CCDC66-207ENST00000439445 CCNL1Q9UK58 526 aaPredicted RBP13.74□□□□□ -0.21
CCDC66-207ENST00000439445 MEGF6O75095 1541 aa13.74□□□□□ -0.21
CCDC66-207ENST00000439445 DOT1LQ8TEK3 1739 aa13.73□□□□□ -0.21
CCDC66-207ENST00000439445 RTL1A6NKG5 1358 aa13.72□□□□□ -0.21
CCDC66-207ENST00000439445 NSD2O96028 1365 aa13.72□□□□□ -0.21
CCDC66-207ENST00000439445 USP47Q96K76 1375 aa13.72□□□□□ -0.21
CCDC66-207ENST00000439445 CGNL1Q0VF96 1302 aa13.72□□□□□ -0.21
CCDC66-207ENST00000439445 TATP17735 454 aaPredicted RBP13.72□□□□□ -0.21
CCDC66-207ENST00000439445 QSER1Q2KHR3 1735 aa13.72□□□□□ -0.21
CCDC66-207ENST00000439445 SMG6Q86US8 1419 aaKnown RBP13.72□□□□□ -0.21
CCDC66-207ENST00000439445 LY75O60449 1722 aa13.71□□□□□ -0.21
CCDC66-207ENST00000439445 HSP90AB2PQ58FF8 381 aa13.71□□□□□ -0.21
CCDC66-207ENST00000439445 SHANK3Q9BYB0 1731 aa13.7□□□□□ -0.22
CCDC66-207ENST00000439445 TUBGCP6Q96RT7 1819 aa13.7□□□□□ -0.22
CCDC66-207ENST00000439445 CDCA8Q53HL2 280 aa13.7□□□□□ -0.22
CCDC66-207ENST00000439445 COL23A1Q86Y22 540 aaPredicted RBP13.7□□□□□ -0.22
CCDC66-207ENST00000439445 NLGN2Q8NFZ4 835 aa13.69□□□□□ -0.22
CCDC66-207ENST00000439445 INSRP06213 1382 aa13.69□□□□□ -0.22
CCDC66-207ENST00000439445 MPRIPQ6WCQ1 1025 aa13.68□□□□□ -0.22
CCDC66-207ENST00000439445 COL24A1Q17RW2 1714 aa13.67□□□□□ -0.22
CCDC66-207ENST00000439445 PCDH11XQ9BZA7 1347 aa13.67□□□□□ -0.22
CCDC66-207ENST00000439445 PCDH11YQ9BZA8 1340 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms