RNA–Protein interactions for RNA: ENST00000439068.6

LSMEM1-202, Transcript of leucine rich single-pass membrane protein 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene LSMEM1, Length 730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1-202ENST00000439068 PPP1R3GB7ZBB8 358 aa13.11□□□□□ -0.31
LSMEM1-202ENST00000439068 ESCO1Q5FWF5 840 aa13.11□□□□□ -0.31
LSMEM1-202ENST00000439068 RBM46Q8TBY0 533 aaKnown RBP13.11□□□□□ -0.31
LSMEM1-202ENST00000439068 BEGAINQ9BUH8 593 aa13.11□□□□□ -0.31
LSMEM1-202ENST00000439068 NPHP3Q7Z494 1330 aa13.11□□□□□ -0.31
LSMEM1-202ENST00000439068 PROX2Q3B8N5 592 aa13.1□□□□□ -0.31
LSMEM1-202ENST00000439068 LHX8Q68G74 356 aa13.1□□□□□ -0.31
LSMEM1-202ENST00000439068 KCNK17Q96T54 332 aa13.1□□□□□ -0.31
LSMEM1-202ENST00000439068 EYA1Q99502 592 aa13.1□□□□□ -0.31
LSMEM1-202ENST00000439068 PTCH1Q13635 1447 aa13.1□□□□□ -0.31
LSMEM1-202ENST00000439068 RCCD1A6NED2 376 aa13.09□□□□□ -0.31
LSMEM1-202ENST00000439068 NUDT18Q6ZVK8 323 aa13.09□□□□□ -0.31
LSMEM1-202ENST00000439068 XRN1Q8IZH2 1706 aaKnown RBP13.09□□□□□ -0.31
LSMEM1-202ENST00000439068 NHSL1Q5SYE7 1610 aa13.09□□□□□ -0.31
LSMEM1-202ENST00000439068 LRPPRCP42704 1394 aaKnown RBP13.08□□□□□ -0.31
LSMEM1-202ENST00000439068 GJD4Q96KN9 370 aaPredicted RBP13.08□□□□□ -0.32
LSMEM1-202ENST00000439068 SRCAPQ6ZRS2 3230 aa13.07□□□□□ -0.32
LSMEM1-202ENST00000439068 SMAPO00193 183 aa13.07□□□□□ -0.32
LSMEM1-202ENST00000439068 FOXO3O43524 673 aa13.07□□□□□ -0.32
LSMEM1-202ENST00000439068 SF3B2Q13435 895 aaKnown RBP13.07□□□□□ -0.32
LSMEM1-202ENST00000439068 HFM1A2PYH4 1435 aa13.06□□□□□ -0.32
LSMEM1-202ENST00000439068 TRIM6-TRIM34B2RNG4 842 aa13.06□□□□□ -0.32
LSMEM1-202ENST00000439068 PNMA3Q9UL41 463 aa13.06□□□□□ -0.32
LSMEM1-202ENST00000439068 ROBO2Q9HCK4 1378 aa13.06□□□□□ -0.32
LSMEM1-202ENST00000439068 NRXN3Q9Y4C0 1643 aa13.06□□□□□ -0.32
LSMEM1-202ENST00000439068 PSEN2P49810 448 aa13.05□□□□□ -0.32
LSMEM1-202ENST00000439068 TATDN2Q93075 761 aa13.05□□□□□ -0.32
LSMEM1-202ENST00000439068 ATRNO75882 1429 aa13.05□□□□□ -0.32
LSMEM1-202ENST00000439068 GOPCQ9HD26 462 aa13.04□□□□□ -0.32
LSMEM1-202ENST00000439068 SPHKAPQ2M3C7 1700 aa13.03□□□□□ -0.32
LSMEM1-202ENST00000439068 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.03□□□□□ -0.32
LSMEM1-202ENST00000439068 SH3D19Q5HYK7 790 aa13.03□□□□□ -0.32
LSMEM1-202ENST00000439068 PPARGC1BQ86YN6 1023 aaKnown RBP13.03□□□□□ -0.32
LSMEM1-202ENST00000439068 UNC5CLQ8IV45 518 aa13.03□□□□□ -0.32
LSMEM1-202ENST00000439068 PCMTD1Q96MG8 357 aaPredicted RBP13.03□□□□□ -0.32
LSMEM1-202ENST00000439068 POLR3EQ9NVU0 708 aa13.03□□□□□ -0.32
LSMEM1-202ENST00000439068 XPCQ01831 940 aaPredicted RBP13.02□□□□□ -0.33
LSMEM1-202ENST00000439068 VARS2Q5ST30 1063 aaKnown RBP13.02□□□□□ -0.33
LSMEM1-202ENST00000439068 POTEEQ6S8J3 1075 aa13.02□□□□□ -0.33
LSMEM1-202ENST00000439068 PACS2Q86VP3 889 aa13.02□□□□□ -0.33
LSMEM1-202ENST00000439068 PROCA1Q8NCQ7 364 aaPredicted RBP13.02□□□□□ -0.33
LSMEM1-202ENST00000439068 STK26Q9P289 416 aa13.02□□□□□ -0.33
LSMEM1-202ENST00000439068 NEXMIFQ5QGS0 1516 aa13.02□□□□□ -0.33
LSMEM1-202ENST00000439068 PSME1Q06323 249 aa13.01□□□□□ -0.33
LSMEM1-202ENST00000439068 MARVELD3Q96A59 401 aa13.01□□□□□ -0.33
LSMEM1-202ENST00000439068 AXIN2Q9Y2T1 843 aa13.01□□□□□ -0.33
LSMEM1-202ENST00000439068 ERBB3P21860 1342 aa13.01□□□□□ -0.33
LSMEM1-202ENST00000439068 NBPF26B4DH59 902 aa13□□□□□ -0.33
LSMEM1-202ENST00000439068 ST18O60284 1047 aa13□□□□□ -0.33
LSMEM1-202ENST00000439068 KIAA1468Q9P260 1216 aa13□□□□□ -0.33
LSMEM1-202ENST00000439068 NALCNQ8IZF0 1738 aa12.99□□□□□ -0.33
LSMEM1-202ENST00000439068 BCL9LQ86UU0 1499 aa12.99□□□□□ -0.33
LSMEM1-202ENST00000439068 ZBED2Q9BTP6 218 aa12.99□□□□□ -0.33
LSMEM1-202ENST00000439068 CCDC9Q9Y3X0 531 aaKnown RBP12.99□□□□□ -0.33
LSMEM1-202ENST00000439068 KIF1BO60333 1816 aa12.99□□□□□ -0.33
LSMEM1-202ENST00000439068 LAMC1P11047 1609 aa12.99□□□□□ -0.33
LSMEM1-202ENST00000439068 SKIV2LQ15477 1246 aaKnown RBP12.98□□□□□ -0.33
LSMEM1-202ENST00000439068 RGL3Q3MIN7 710 aa12.98□□□□□ -0.33
LSMEM1-202ENST00000439068 KRT28Q7Z3Y7 464 aa12.98□□□□□ -0.33
LSMEM1-202ENST00000439068 WAPLQ7Z5K2 1190 aa12.98□□□□□ -0.33
LSMEM1-202ENST00000439068 RSPH6AQ9H0K4 717 aa12.98□□□□□ -0.33
LSMEM1-202ENST00000439068 CLTCL1P53675 1640 aa12.98□□□□□ -0.33
LSMEM1-202ENST00000439068 MYOM2P54296 1465 aa12.97□□□□□ -0.33
LSMEM1-202ENST00000439068 BLMP54132 1417 aaPredicted RBP12.97□□□□□ -0.33
LSMEM1-202ENST00000439068 PRAG1Q86YV5 1406 aa12.97□□□□□ -0.33
LSMEM1-202ENST00000439068 SPATA31A3Q5VYP0 1347 aa12.97□□□□□ -0.33
LSMEM1-202ENST00000439068 DNAJB2P25686 324 aa12.97□□□□□ -0.33
LSMEM1-202ENST00000439068 MYSM1Q5VVJ2 828 aa12.97□□□□□ -0.33
LSMEM1-202ENST00000439068 DMRTA1Q5VZB9 504 aa12.97□□□□□ -0.33
LSMEM1-202ENST00000439068 SEPT12Q8IYM1 358 aa12.97□□□□□ -0.33
LSMEM1-202ENST00000439068 TBC1D2Q9BYX2 928 aa12.97□□□□□ -0.33
LSMEM1-202ENST00000439068 DDX11L8A8MPP1 907 aa12.96□□□□□ -0.33
LSMEM1-202ENST00000439068 VPS72Q15906 364 aa12.95□□□□□ -0.34
LSMEM1-202ENST00000439068 TMEM134Q9H6X4 195 aa12.95□□□□□ -0.34
LSMEM1-202ENST00000439068 NAIPQ13075 1403 aa12.95□□□□□ -0.34
LSMEM1-202ENST00000439068 COL22A1Q8NFW1 1626 aaPredicted RBP12.95□□□□□ -0.34
LSMEM1-202ENST00000439068 ABCC11Q96J66 1382 aa12.94□□□□□ -0.34
LSMEM1-202ENST00000439068 ANKRD30BQ9BXX2 1392 aa12.94□□□□□ -0.34
LSMEM1-202ENST00000439068 PXDNQ92626 1479 aa12.94□□□□□ -0.34
LSMEM1-202ENST00000439068 A0A0G2JS52 829 aa12.94□□□□□ -0.34
LSMEM1-202ENST00000439068 EMP3P54852 163 aa12.94□□□□□ -0.34
LSMEM1-202ENST00000439068 MYT1Q01538 1121 aa12.94□□□□□ -0.34
LSMEM1-202ENST00000439068 TMEM132EQ6IEE7 984 aa12.94□□□□□ -0.34
LSMEM1-202ENST00000439068 KRT27Q7Z3Y8 459 aa12.94□□□□□ -0.34
LSMEM1-202ENST00000439068 DEFB132Q7Z7B7 95 aa12.94□□□□□ -0.34
LSMEM1-202ENST00000439068 SIRT1Q96EB6 747 aa12.94□□□□□ -0.34
LSMEM1-202ENST00000439068 ADGRF5Q8IZF2 1346 aa12.93□□□□□ -0.34
LSMEM1-202ENST00000439068 ARHGAP33O14559 1287 aa12.93□□□□□ -0.34
LSMEM1-202ENST00000439068 ONECUT3O60422 494 aaPredicted RBP12.93□□□□□ -0.34
LSMEM1-202ENST00000439068 CD46P15529 392 aa12.93□□□□□ -0.34
LSMEM1-202ENST00000439068 BAG6P46379 1132 aa12.93□□□□□ -0.34
LSMEM1-202ENST00000439068 CCDC144AA2RUR9 1427 aa12.93□□□□□ -0.34
LSMEM1-202ENST00000439068 RALGAPBQ86X10 1494 aa12.92□□□□□ -0.34
LSMEM1-202ENST00000439068 EP400Q96L91 3159 aa12.92□□□□□ -0.34
LSMEM1-202ENST00000439068 FAM205CA6NFA0 338 aa12.92□□□□□ -0.34
LSMEM1-202ENST00000439068 SPIRE2Q8WWL2 714 aa12.92□□□□□ -0.34
LSMEM1-202ENST00000439068 SEPT9Q9UHD8 586 aaPredicted RBP12.92□□□□□ -0.34
LSMEM1-202ENST00000439068 CDC42BPGQ6DT37 1551 aa12.91□□□□□ -0.34
LSMEM1-202ENST00000439068 FAM163AQ96GL9 167 aaPredicted RBP12.91□□□□□ -0.34
LSMEM1-202ENST00000439068 SLIT2O94813 1529 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms