RNA–Protein interactions for RNA: ENST00000438704.6

HMGB2-202, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,032 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-202ENST00000438704 SLIT1O75093 1534 aa10.52□□□□□ -0.73
HMGB2-202ENST00000438704 ALKQ9UM73 1620 aa10.51□□□□□ -0.73
HMGB2-202ENST00000438704 PTGDRQ13258 359 aa10.51□□□□□ -0.73
HMGB2-202ENST00000438704 PPP1R18Q6NYC8 613 aa10.51□□□□□ -0.73
HMGB2-202ENST00000438704 V9GY48 417 aaPredicted RBP10.51□□□□□ -0.73
HMGB2-202ENST00000438704 DLC1Q96QB1 1528 aa10.51□□□□□ -0.73
HMGB2-202ENST00000438704 SETD1AO15047 1707 aaKnown RBP10.5□□□□□ -0.73
HMGB2-202ENST00000438704 PRKRIP1Q9H875 184 aaPredicted RBP10.5□□□□□ -0.73
HMGB2-202ENST00000438704 CENPJQ9HC77 1338 aaPredicted RBP10.5□□□□□ -0.73
HMGB2-202ENST00000438704 NRXN3Q9Y4C0 1643 aa10.49□□□□□ -0.73
HMGB2-202ENST00000438704 ZNF516Q92618 1163 aa10.49□□□□□ -0.73
HMGB2-202ENST00000438704 SIRT1Q96EB6 747 aa10.49□□□□□ -0.73
HMGB2-202ENST00000438704 PRKD2Q9BZL6 878 aa10.49□□□□□ -0.73
HMGB2-202ENST00000438704 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.49□□□□□ -0.73
HMGB2-202ENST00000438704 ARHGEF28Q8N1W1 1705 aaKnown RBP10.49□□□□□ -0.73
HMGB2-202ENST00000438704 ABCC11Q96J66 1382 aa10.49□□□□□ -0.73
HMGB2-202ENST00000438704 YTHDC2Q9H6S0 1430 aaKnown RBP10.49□□□□□ -0.73
HMGB2-202ENST00000438704 PTPRMP28827 1452 aa10.49□□□□□ -0.73
HMGB2-202ENST00000438704 PER1O15534 1290 aaPredicted RBP10.48□□□□□ -0.73
HMGB2-202ENST00000438704 DNAJB2P25686 324 aa10.48□□□□□ -0.73
HMGB2-202ENST00000438704 LRPPRCP42704 1394 aaKnown RBP10.48□□□□□ -0.73
HMGB2-202ENST00000438704 NPC1L1Q9UHC9 1359 aa10.48□□□□□ -0.73
HMGB2-202ENST00000438704 PLEKHG1Q9ULL1 1385 aa10.48□□□□□ -0.73
HMGB2-202ENST00000438704 SETD1BQ9UPS6 1966 aaKnown RBP10.48□□□□□ -0.73
HMGB2-202ENST00000438704 TECPR2O15040 1411 aa10.48□□□□□ -0.73
HMGB2-202ENST00000438704 MED14O60244 1454 aa10.48□□□□□ -0.73
HMGB2-202ENST00000438704 GGCXP38435 758 aa10.47□□□□□ -0.73
HMGB2-202ENST00000438704 RBM46Q8TBY0 533 aaKnown RBP10.47□□□□□ -0.73
HMGB2-202ENST00000438704 MYOM1P52179 1685 aa10.45□□□□□ -0.74
HMGB2-202ENST00000438704 ZNF142P52746 1687 aaPredicted RBP10.45□□□□□ -0.74
HMGB2-202ENST00000438704 QRICH2Q9H0J4 1663 aa10.45□□□□□ -0.74
HMGB2-202ENST00000438704 FAM135BQ49AJ0 1406 aa10.45□□□□□ -0.74
HMGB2-202ENST00000438704 NINLQ9Y2I6 1382 aa10.45□□□□□ -0.74
HMGB2-202ENST00000438704 RALBP1Q15311 655 aa10.45□□□□□ -0.74
HMGB2-202ENST00000438704 TMEM132EQ6IEE7 984 aa10.45□□□□□ -0.74
HMGB2-202ENST00000438704 TMUB1Q9BVT8 246 aa10.45□□□□□ -0.74
HMGB2-202ENST00000438704 TMEM134Q9H6X4 195 aa10.45□□□□□ -0.74
HMGB2-202ENST00000438704 KNDC1Q76NI1 1749 aa10.44□□□□□ -0.74
HMGB2-202ENST00000438704 ADAMTS13Q76LX8 1427 aa10.44□□□□□ -0.74
HMGB2-202ENST00000438704 PARD3Q8TEW0 1356 aa10.44□□□□□ -0.74
HMGB2-202ENST00000438704 GFRA3O60609 400 aa10.44□□□□□ -0.74
HMGB2-202ENST00000438704 CENPBP07199 599 aaPredicted RBP10.44□□□□□ -0.74
HMGB2-202ENST00000438704 COPS2P61201 443 aa10.44□□□□□ -0.74
HMGB2-202ENST00000438704 THEMISQ8N1K5 641 aaPredicted RBP10.44□□□□□ -0.74
HMGB2-202ENST00000438704 TRAK1Q9UPV9 953 aa10.44□□□□□ -0.74
HMGB2-202ENST00000438704 ADGRG1Q9Y653 693 aa10.44□□□□□ -0.74
HMGB2-202ENST00000438704 RIMS1Q86UR5 1692 aaKnown RBP10.44□□□□□ -0.74
HMGB2-202ENST00000438704 DIP2AQ14689 1571 aa10.43□□□□□ -0.74
HMGB2-202ENST00000438704 NRG2O14511 850 aaPredicted RBP10.43□□□□□ -0.74
HMGB2-202ENST00000438704 ZPR1O75312 459 aa10.43□□□□□ -0.74
HMGB2-202ENST00000438704 CEBPAP49715 358 aaPredicted RBP10.43□□□□□ -0.74
HMGB2-202ENST00000438704 NUTM2DQ5VT03 806 aaPredicted RBP10.43□□□□□ -0.74
HMGB2-202ENST00000438704 PCDHB3Q9Y5E6 796 aa10.43□□□□□ -0.74
HMGB2-202ENST00000438704 CEP170BQ9Y4F5 1589 aaPredicted RBP10.43□□□□□ -0.74
HMGB2-202ENST00000438704 CPS1P31327 1500 aa10.43□□□□□ -0.74
HMGB2-202ENST00000438704 TULP4Q9NRJ4 1543 aa10.43□□□□□ -0.74
HMGB2-202ENST00000438704 EVC2Q86UK5 1308 aa10.42□□□□□ -0.74
HMGB2-202ENST00000438704 NKX2-3Q8TAU0 364 aa10.42□□□□□ -0.74
HMGB2-202ENST00000438704 PANK3Q9H999 370 aa10.42□□□□□ -0.74
HMGB2-202ENST00000438704 PIK3R4Q99570 1358 aa10.41□□□□□ -0.74
HMGB2-202ENST00000438704 LTKP29376 864 aa10.41□□□□□ -0.74
HMGB2-202ENST00000438704 TBX22Q9Y458 520 aa10.41□□□□□ -0.74
HMGB2-202ENST00000438704 EID1Q9Y6B2 187 aa10.41□□□□□ -0.74
HMGB2-202ENST00000438704 BRD4O60885 1362 aaPredicted RBP10.4□□□□□ -0.74
HMGB2-202ENST00000438704 METP08581 1390 aa10.4□□□□□ -0.74
HMGB2-202ENST00000438704 NUTM2FA1L443 756 aa10.4□□□□□ -0.74
HMGB2-202ENST00000438704 FCHSD2O94868 740 aa10.4□□□□□ -0.74
HMGB2-202ENST00000438704 INSRP06213 1382 aa10.39□□□□□ -0.75
HMGB2-202ENST00000438704 ATAD2Q6PL18 1390 aa10.39□□□□□ -0.75
HMGB2-202ENST00000438704 MYBBP1AQ9BQG0 1328 aaKnown RBP10.39□□□□□ -0.75
HMGB2-202ENST00000438704 KMT5BQ4FZB7 885 aa10.39□□□□□ -0.75
HMGB2-202ENST00000438704 TXNDC2Q86VQ3 553 aa10.39□□□□□ -0.75
HMGB2-202ENST00000438704 POLR3GLQ9BT43 218 aa10.39□□□□□ -0.75
HMGB2-202ENST00000438704 USP32Q8NFA0 1604 aa10.39□□□□□ -0.75
HMGB2-202ENST00000438704 RCCD1A6NED2 376 aa10.38□□□□□ -0.75
HMGB2-202ENST00000438704 ACTN4O43707 911 aaKnown RBP10.38□□□□□ -0.75
HMGB2-202ENST00000438704 TRAF7Q6Q0C0 670 aa10.38□□□□□ -0.75
HMGB2-202ENST00000438704 PRAM1Q96QH2 718 aa10.38□□□□□ -0.75
HMGB2-202ENST00000438704 PTCH1Q13635 1447 aa10.38□□□□□ -0.75
HMGB2-202ENST00000438704 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.37□□□□□ -0.75
HMGB2-202ENST00000438704 ADGRB2O60241 1585 aa10.37□□□□□ -0.75
HMGB2-202ENST00000438704 BLOC1S3Q6QNY0 202 aa10.37□□□□□ -0.75
HMGB2-202ENST00000438704 NLRP13Q86W25 1043 aa10.37□□□□□ -0.75
HMGB2-202ENST00000438704 KNSTRNQ9Y448 316 aa10.37□□□□□ -0.75
HMGB2-202ENST00000438704 ANKRD36BQ8N2N9 1353 aa10.37□□□□□ -0.75
HMGB2-202ENST00000438704 LCE2BO14633 110 aa10.35□□□□□ -0.75
HMGB2-202ENST00000438704 SEMA3EO15041 775 aa10.35□□□□□ -0.75
HMGB2-202ENST00000438704 POGKQ9P215 609 aa10.35□□□□□ -0.75
HMGB2-202ENST00000438704 STK26Q9P289 416 aa10.35□□□□□ -0.75
HMGB2-202ENST00000438704 NSD2O96028 1365 aa10.35□□□□□ -0.75
HMGB2-202ENST00000438704 XRN1Q8IZH2 1706 aaKnown RBP10.34□□□□□ -0.75
HMGB2-202ENST00000438704 OATP04181 439 aa10.34□□□□□ -0.75
HMGB2-202ENST00000438704 CFHP08603 1231 aa10.34□□□□□ -0.75
HMGB2-202ENST00000438704 HIC1Q14526 733 aa10.34□□□□□ -0.75
HMGB2-202ENST00000438704 CARD14Q9BXL6 1004 aa10.34□□□□□ -0.75
HMGB2-202ENST00000438704 MRS2Q9HD23 443 aa10.34□□□□□ -0.75
HMGB2-202ENST00000438704 PTPRUQ92729 1446 aa10.33□□□□□ -0.76
HMGB2-202ENST00000438704 CCDC184Q52MB2 194 aa10.33□□□□□ -0.76
HMGB2-202ENST00000438704 ANKLE2Q86XL3 938 aa10.33□□□□□ -0.76
HMGB2-202ENST00000438704 PXYLP1Q8TE99 480 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms