RNA–Protein interactions for RNA: ENST00000437966.3

CHRNA7-202, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 2

Gene CHRNA7, Length 1,788 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-202ENST00000437966 TSPYL6Q8N831 410 aa25.22■■□□□ 1.63
CHRNA7-202ENST00000437966 PRDM11Q9NQV5 511 aa25.22■■□□□ 1.63
CHRNA7-202ENST00000437966 CPDO75976 1380 aa25.22■■□□□ 1.63
CHRNA7-202ENST00000437966 CANXP27824 592 aaKnown RBP25.21■■□□□ 1.63
CHRNA7-202ENST00000437966 CRB1P82279 1406 aa25.21■■□□□ 1.63
CHRNA7-202ENST00000437966 SSH1Q8WYL5 1049 aa25.21■■□□□ 1.63
CHRNA7-202ENST00000437966 CT47B1P0C2W7 299 aaPredicted RBP25.2■■□□□ 1.62
CHRNA7-202ENST00000437966 C8orf58Q8NAV2 365 aa25.2■■□□□ 1.62
CHRNA7-202ENST00000437966 TNNQ9UQP3 1299 aa25.2■■□□□ 1.62
CHRNA7-202ENST00000437966 PIP4K2BP78356 416 aa25.19■■□□□ 1.62
CHRNA7-202ENST00000437966 IL17REQ8NFR9 667 aa25.19■■□□□ 1.62
CHRNA7-202ENST00000437966 MAP3K5Q99683 1374 aa25.18■■□□□ 1.62
CHRNA7-202ENST00000437966 CHL1O00533 1208 aa25.18■■□□□ 1.62
CHRNA7-202ENST00000437966 AEBP2Q6ZN18 517 aaPredicted RBP25.18■■□□□ 1.62
CHRNA7-202ENST00000437966 SMC4Q9NTJ3 1288 aa25.18■■□□□ 1.62
CHRNA7-202ENST00000437966 PLEKHO1Q53GL0 409 aaPredicted RBP25.18■■□□□ 1.62
CHRNA7-202ENST00000437966 NCAPD2Q15021 1401 aa25.17■■□□□ 1.62
CHRNA7-202ENST00000437966 HTATSF1O43719 755 aaKnown RBP25.17■■□□□ 1.62
CHRNA7-202ENST00000437966 VAMP4O75379 141 aa25.17■■□□□ 1.62
CHRNA7-202ENST00000437966 KRT24Q2M2I5 525 aa25.17■■□□□ 1.62
CHRNA7-202ENST00000437966 ZNF530Q6P9A1 599 aaPredicted RBP25.17■■□□□ 1.62
CHRNA7-202ENST00000437966 PANK1Q8TE04 598 aa25.17■■□□□ 1.62
CHRNA7-202ENST00000437966 CCDC136Q96JN2 1154 aa25.17■■□□□ 1.62
CHRNA7-202ENST00000437966 TCERG1O14776 1098 aaKnown RBP25.16■■□□□ 1.62
CHRNA7-202ENST00000437966 LGR6Q9HBX8 967 aa25.15■■□□□ 1.62
CHRNA7-202ENST00000437966 TWISTNBQ3B726 338 aaPredicted RBP25.14■■□□□ 1.62
CHRNA7-202ENST00000437966 CAMTA1Q9Y6Y1 1673 aa25.14■■□□□ 1.61
CHRNA7-202ENST00000437966 ABCA3Q99758 1704 aa25.13■■□□□ 1.61
CHRNA7-202ENST00000437966 TSPYL4Q9UJ04 414 aa25.13■■□□□ 1.61
CHRNA7-202ENST00000437966 AMOTQ4VCS5 1084 aa25.12■■□□□ 1.61
CHRNA7-202ENST00000437966 RAPGEF4Q8WZA2 1011 aa25.12■■□□□ 1.61
CHRNA7-202ENST00000437966 CLUAP1Q96AJ1 413 aa25.12■■□□□ 1.61
CHRNA7-202ENST00000437966 LMO7Q8WWI1 1683 aa25.12■■□□□ 1.61
CHRNA7-202ENST00000437966 MPRIPQ6WCQ1 1025 aa25.11■■□□□ 1.61
CHRNA7-202ENST00000437966 NOB1Q9ULX3 412 aaKnown RBP25.11■■□□□ 1.61
CHRNA7-202ENST00000437966 TOM1O60784 492 aa25.1■■□□□ 1.61
CHRNA7-202ENST00000437966 RLBP1P12271 317 aa25.1■■□□□ 1.61
CHRNA7-202ENST00000437966 AKAP4Q5JQC9 854 aa25.1■■□□□ 1.61
CHRNA7-202ENST00000437966 STRN4Q9NRL3 753 aa25.1■■□□□ 1.61
CHRNA7-202ENST00000437966 COG6Q9Y2V7 657 aa25.1■■□□□ 1.61
CHRNA7-202ENST00000437966 AHDC1Q5TGY3 1603 aaPredicted RBP25.1■■□□□ 1.61
CHRNA7-202ENST00000437966 PDE3AQ14432 1141 aa25.1■■□□□ 1.61
CHRNA7-202ENST00000437966 ABCC6O95255 1503 aa25.09■■□□□ 1.61
CHRNA7-202ENST00000437966 TATP17735 454 aaPredicted RBP25.09■■□□□ 1.61
CHRNA7-202ENST00000437966 UBAP1LF5GYI3 381 aa25.08■■□□□ 1.61
CHRNA7-202ENST00000437966 ALDH1L2Q3SY69 923 aa25.08■■□□□ 1.61
CHRNA7-202ENST00000437966 C1orf141Q5JVX7 400 aa25.08■■□□□ 1.61
CHRNA7-202ENST00000437966 ZKSCAN2Q63HK3 967 aa25.08■■□□□ 1.61
CHRNA7-202ENST00000437966 TOM1L2Q6ZVM7 507 aa25.08■■□□□ 1.61
CHRNA7-202ENST00000437966 FAM208AQ9UK61 1670 aaKnown RBP25.08■■□□□ 1.61
CHRNA7-202ENST00000437966 EVA1CP58658 441 aa25.07■■□□□ 1.6
CHRNA7-202ENST00000437966 TAF7Q15545 349 aaPredicted RBP25.07■■□□□ 1.6
CHRNA7-202ENST00000437966 MRPL50Q8N5N7 158 aaKnown RBP25.07■■□□□ 1.6
CHRNA7-202ENST00000437966 MEGF6O75095 1541 aa25.07■■□□□ 1.6
CHRNA7-202ENST00000437966 WDR17Q8IZU2 1322 aa25.06■■□□□ 1.6
CHRNA7-202ENST00000437966 LARP1Q6PKG0 1096 aaKnown RBP25.05■■□□□ 1.6
CHRNA7-202ENST00000437966 COL5A2P05997 1499 aaPredicted RBP25.05■■□□□ 1.6
CHRNA7-202ENST00000437966 LRRC37A3O60309 1634 aa25.05■■□□□ 1.6
CHRNA7-202ENST00000437966 RNMTO43148 476 aaKnown RBP25.04■■□□□ 1.6
CHRNA7-202ENST00000437966 CEMIPQ8WUJ3 1361 aa25.04■■□□□ 1.6
CHRNA7-202ENST00000437966 PHLPP1O60346 1717 aa25.03■■□□□ 1.6
CHRNA7-202ENST00000437966 TRIM27P14373 513 aa25.03■■□□□ 1.6
CHRNA7-202ENST00000437966 ZNF428Q96B54 188 aa25.03■■□□□ 1.6
CHRNA7-202ENST00000437966 BTG4Q9NY30 223 aa25.03■■□□□ 1.6
CHRNA7-202ENST00000437966 DZIP1LQ8IYY4 767 aaKnown RBP25.02■■□□□ 1.6
CHRNA7-202ENST00000437966 ATF7IPQ6VMQ6 1270 aa25.01■■□□□ 1.59
CHRNA7-202ENST00000437966 SPG7Q9UQ90 795 aa25.01■■□□□ 1.59
CHRNA7-202ENST00000437966 TEFQ10587 303 aa25■■□□□ 1.59
CHRNA7-202ENST00000437966 FTSJ3Q8IY81 847 aaKnown RBP25■■□□□ 1.59
CHRNA7-202ENST00000437966 KCNQ3O43525 872 aa24.99■■□□□ 1.59
CHRNA7-202ENST00000437966 ADAMTS2O95450 1211 aa24.99■■□□□ 1.59
CHRNA7-202ENST00000437966 PELP1Q8IZL8 1130 aaKnown RBP24.99■■□□□ 1.59
CHRNA7-202ENST00000437966 USP35Q9P2H5 1018 aa24.99■■□□□ 1.59
CHRNA7-202ENST00000437966 KIF16BQ96L93 1317 aa24.99■■□□□ 1.59
CHRNA7-202ENST00000437966 COL16A1Q07092 1604 aaPredicted RBP24.98■■□□□ 1.59
CHRNA7-202ENST00000437966 NUTM2BA6NNL0 878 aaPredicted RBP24.98■■□□□ 1.59
CHRNA7-202ENST00000437966 NUTM2EB1AL46 878 aaPredicted RBP24.98■■□□□ 1.59
CHRNA7-202ENST00000437966 IPO8O15397 1037 aaKnown RBP24.98■■□□□ 1.59
CHRNA7-202ENST00000437966 PHKG2P15735 406 aa24.98■■□□□ 1.59
CHRNA7-202ENST00000437966 NUTM2AQ8IVF1 878 aaPredicted RBP24.98■■□□□ 1.59
CHRNA7-202ENST00000437966 CARD10Q9BWT7 1032 aa24.98■■□□□ 1.59
CHRNA7-202ENST00000437966 BRPF1P55201 1214 aaPredicted RBP24.98■■□□□ 1.59
CHRNA7-202ENST00000437966 COL22A1Q8NFW1 1626 aaPredicted RBP24.96■■□□□ 1.59
CHRNA7-202ENST00000437966 BTBD11A6QL63 1104 aa24.96■■□□□ 1.59
CHRNA7-202ENST00000437966 CYP27B1O15528 508 aa24.96■■□□□ 1.59
CHRNA7-202ENST00000437966 NECTIN2Q92692 538 aa24.96■■□□□ 1.59
CHRNA7-202ENST00000437966 BABAM1Q9NWV8 329 aa24.96■■□□□ 1.59
CHRNA7-202ENST00000437966 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.96■■□□□ 1.59
CHRNA7-202ENST00000437966 IFNL2Q8IZJ0 200 aa24.95■■□□□ 1.59
CHRNA7-202ENST00000437966 TMEM57Q8N5G2 664 aa24.95■■□□□ 1.59
CHRNA7-202ENST00000437966 MVPQ14764 893 aaKnown RBP24.95■■□□□ 1.58
CHRNA7-202ENST00000437966 MS4A1P11836 297 aa24.94■■□□□ 1.58
CHRNA7-202ENST00000437966 ITPRIPQ8IWB1 547 aa24.93■■□□□ 1.58
CHRNA7-202ENST00000437966 OVOS2A0A0G2JMS6 1433 aa24.92■■□□□ 1.58
CHRNA7-202ENST00000437966 IL2RBP14784 551 aa24.92■■□□□ 1.58
CHRNA7-202ENST00000437966 ZCRB1Q8TBF4 217 aaKnown RBP24.92■■□□□ 1.58
CHRNA7-202ENST00000437966 KDM6AO15550 1401 aaPredicted RBP24.92■■□□□ 1.58
CHRNA7-202ENST00000437966 SLC4A2P04920 1241 aa24.91■■□□□ 1.58
CHRNA7-202ENST00000437966 EIF4A1P60842 406 aaKnown RBP24.91■■□□□ 1.58
CHRNA7-202ENST00000437966 CERKQ8TCT0 537 aa24.91■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms