RNA–Protein interactions for RNA: ENST00000437654.5

IRF1-203, Transcript of interferon regulatory factor 1, humanhuman

TSL 3

Gene IRF1, Length 832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-203ENST00000437654 ILDR2Q71H61 639 aa24.29■■□□□ 1.48
IRF1-203ENST00000437654 SPG7Q9UQ90 795 aa24.29■■□□□ 1.48
IRF1-203ENST00000437654 U2AF1L5P0DN76 240 aaPredicted RBP24.28■■□□□ 1.48
IRF1-203ENST00000437654 U2AF1Q01081 240 aaKnown RBP eCLIP24.28■■□□□ 1.48
IRF1-203ENST00000437654 TNS2Q63HR2 1409 aa24.27■■□□□ 1.48
IRF1-203ENST00000437654 MEGF6O75095 1541 aa24.27■■□□□ 1.48
IRF1-203ENST00000437654 WNK3Q9BYP7 1800 aa24.27■■□□□ 1.48
IRF1-203ENST00000437654 PLEKHO1Q53GL0 409 aaPredicted RBP24.27■■□□□ 1.48
IRF1-203ENST00000437654 AEBP1Q8IUX7 1158 aa24.26■■□□□ 1.47
IRF1-203ENST00000437654 HMOX1P09601 288 aa24.25■■□□□ 1.47
IRF1-203ENST00000437654 FAM196AQ6ZSG2 479 aa24.25■■□□□ 1.47
IRF1-203ENST00000437654 PCDH11XQ9BZA7 1347 aa24.24■■□□□ 1.47
IRF1-203ENST00000437654 PCDH11YQ9BZA8 1340 aa24.24■■□□□ 1.47
IRF1-203ENST00000437654 BCL9O00512 1426 aa24.24■■□□□ 1.47
IRF1-203ENST00000437654 MARCH10Q8NA82 808 aaPredicted RBP24.23■■□□□ 1.47
IRF1-203ENST00000437654 RSPH6AQ9H0K4 717 aa24.23■■□□□ 1.47
IRF1-203ENST00000437654 LRRC37A3O60309 1634 aa24.23■■□□□ 1.47
IRF1-203ENST00000437654 WDR43Q15061 677 aaKnown RBP eCLIP24.22■■□□□ 1.47
IRF1-203ENST00000437654 DDX54Q8TDD1 881 aaKnown RBP24.21■■□□□ 1.47
IRF1-203ENST00000437654 NEFMP07197 916 aa24.2■■□□□ 1.46
IRF1-203ENST00000437654 IFNL2Q8IZJ0 200 aa24.2■■□□□ 1.46
IRF1-203ENST00000437654 BRWD3Q6RI45 1802 aa24.19■■□□□ 1.46
IRF1-203ENST00000437654 CCER2I3L3R5 266 aa24.19■■□□□ 1.46
IRF1-203ENST00000437654 PRKAR2BP31323 418 aa24.19■■□□□ 1.46
IRF1-203ENST00000437654 NKX1-1Q15270 411 aaPredicted RBP24.19■■□□□ 1.46
IRF1-203ENST00000437654 CCDC125Q86Z20 511 aa24.19■■□□□ 1.46
IRF1-203ENST00000437654 MRS2Q9HD23 443 aa24.19■■□□□ 1.46
IRF1-203ENST00000437654 HSP90AB1P08238 724 aaKnown RBP24.18■■□□□ 1.46
IRF1-203ENST00000437654 CYP27B1O15528 508 aa24.17■■□□□ 1.46
IRF1-203ENST00000437654 PKD1L3Q7Z443 1732 aa24.16■■□□□ 1.46
IRF1-203ENST00000437654 PHKG2P15735 406 aa24.16■■□□□ 1.46
IRF1-203ENST00000437654 GAS2L2Q8NHY3 880 aa24.16■■□□□ 1.46
IRF1-203ENST00000437654 PNISRQ8TF01 805 aaKnown RBP24.16■■□□□ 1.46
IRF1-203ENST00000437654 PLEKHF1Q96S99 279 aa24.16■■□□□ 1.46
IRF1-203ENST00000437654 CCDC184Q52MB2 194 aa24.15■■□□□ 1.46
IRF1-203ENST00000437654 C1orf141Q5JVX7 400 aa24.15■■□□□ 1.46
IRF1-203ENST00000437654 ADAMTS8Q9UP79 889 aa24.15■■□□□ 1.46
IRF1-203ENST00000437654 AKAP4Q5JQC9 854 aa24.14■■□□□ 1.45
IRF1-203ENST00000437654 ZNF530Q6P9A1 599 aaPredicted RBP24.14■■□□□ 1.45
IRF1-203ENST00000437654 MTHFSDQ2M296 383 aaKnown RBP24.13■■□□□ 1.45
IRF1-203ENST00000437654 FAM182BQ5T319 152 aa24.12■■□□□ 1.45
IRF1-203ENST00000437654 DCAF5Q96JK2 942 aa24.12■■□□□ 1.45
IRF1-203ENST00000437654 PHACTR3Q96KR7 559 aa24.12■■□□□ 1.45
IRF1-203ENST00000437654 RUNDC1Q96C34 613 aa24.1■■□□□ 1.45
IRF1-203ENST00000437654 BCL11BQ9C0K0 894 aaPredicted RBP24.1■■□□□ 1.45
IRF1-203ENST00000437654 MAPK8IP3Q9UPT6 1336 aa24.1■■□□□ 1.45
IRF1-203ENST00000437654 SHANK3Q9BYB0 1731 aa24.09■■□□□ 1.45
IRF1-203ENST00000437654 HTATSF1O43719 755 aaKnown RBP24.08■■□□□ 1.45
IRF1-203ENST00000437654 GNAT3A8MTJ3 354 aa24.07■■□□□ 1.44
IRF1-203ENST00000437654 ERVV-2B6SEH9 535 aa24.07■■□□□ 1.44
IRF1-203ENST00000437654 MIER1Q8N108 512 aa24.07■■□□□ 1.44
IRF1-203ENST00000437654 UPF1Q92900 1129 aaKnown RBP eCLIP24.07■■□□□ 1.44
IRF1-203ENST00000437654 SF3B2Q13435 895 aaKnown RBP24.06■■□□□ 1.44
IRF1-203ENST00000437654 TRIM37O94972 964 aa24.05■■□□□ 1.44
IRF1-203ENST00000437654 SOCS7O14512 581 aa24.04■■□□□ 1.44
IRF1-203ENST00000437654 NFE2L2Q16236 605 aa24.04■■□□□ 1.44
IRF1-203ENST00000437654 PRIM1P49642 420 aaKnown RBP24.03■■□□□ 1.44
IRF1-203ENST00000437654 MAP3K5Q99683 1374 aa24.03■■□□□ 1.44
IRF1-203ENST00000437654 RTF1Q92541 710 aaKnown RBP24.02■■□□□ 1.44
IRF1-203ENST00000437654 RNMTO43148 476 aaKnown RBP24.01■■□□□ 1.43
IRF1-203ENST00000437654 NCBP3Q53F19 620 aaKnown RBP24.01■■□□□ 1.43
IRF1-203ENST00000437654 MPRIPQ6WCQ1 1025 aa24.01■■□□□ 1.43
IRF1-203ENST00000437654 ACSBG1Q96GR2 724 aa24.01■■□□□ 1.43
IRF1-203ENST00000437654 PLSCR1O15162 318 aa24■■□□□ 1.43
IRF1-203ENST00000437654 KCNQ2O43526 872 aa24■■□□□ 1.43
IRF1-203ENST00000437654 TMPOP42166 694 aaKnown RBP24■■□□□ 1.43
IRF1-203ENST00000437654 CABP4P57796 275 aa23.99■■□□□ 1.43
IRF1-203ENST00000437654 LMOD3Q0VAK6 560 aa23.99■■□□□ 1.43
IRF1-203ENST00000437654 CCDC146Q8IYE0 955 aa23.99■■□□□ 1.43
IRF1-203ENST00000437654 APBA3O96018 575 aa23.98■■□□□ 1.43
IRF1-203ENST00000437654 BAG6P46379 1132 aa23.98■■□□□ 1.43
IRF1-203ENST00000437654 FAM9BQ8IZU0 186 aa23.98■■□□□ 1.43
IRF1-203ENST00000437654 SYTL4Q96C24 671 aaPredicted RBP23.98■■□□□ 1.43
IRF1-203ENST00000437654 TMOD3Q9NYL9 352 aa23.98■■□□□ 1.43
IRF1-203ENST00000437654 KDM6AO15550 1401 aaPredicted RBP23.98■■□□□ 1.43
IRF1-203ENST00000437654 SBF2Q86WG5 1849 aa23.98■■□□□ 1.43
IRF1-203ENST00000437654 RIPK4P57078 832 aa23.97■■□□□ 1.43
IRF1-203ENST00000437654 IL17REQ8NFR9 667 aa23.97■■□□□ 1.43
IRF1-203ENST00000437654 LGR6Q9HBX8 967 aa23.97■■□□□ 1.43
IRF1-203ENST00000437654 NHSQ6T4R5 1651 aa23.96■■□□□ 1.43
IRF1-203ENST00000437654 CEMIPQ8WUJ3 1361 aa23.96■■□□□ 1.43
IRF1-203ENST00000437654 NGEFQ8N5V2 710 aa23.96■■□□□ 1.43
IRF1-203ENST00000437654 SLC52A2Q9HAB3 445 aa23.96■■□□□ 1.43
IRF1-203ENST00000437654 HMGB2P26583 209 aaKnown RBP23.95■■□□□ 1.42
IRF1-203ENST00000437654 PIGBQ92521 554 aa23.95■■□□□ 1.42
IRF1-203ENST00000437654 SMARCC1Q92922 1105 aaPredicted RBP23.95■■□□□ 1.42
IRF1-203ENST00000437654 APAF1O14727 1248 aa23.94■■□□□ 1.42
IRF1-203ENST00000437654 NFATC2IPQ8NCF5 419 aa23.94■■□□□ 1.42
IRF1-203ENST00000437654 ADAMTS7Q9UKP4 1686 aa23.93■■□□□ 1.42
IRF1-203ENST00000437654 TEFQ10587 303 aa23.93■■□□□ 1.42
IRF1-203ENST00000437654 PTF1AQ7RTS3 328 aa23.93■■□□□ 1.42
IRF1-203ENST00000437654 DOT1LQ8TEK3 1739 aa23.91■■□□□ 1.42
IRF1-203ENST00000437654 SCN11AQ9UI33 1791 aa23.91■■□□□ 1.42
IRF1-203ENST00000437654 MRC1P22897 1456 aa23.9■■□□□ 1.42
IRF1-203ENST00000437654 CCDC27Q2M243 656 aa23.9■■□□□ 1.42
IRF1-203ENST00000437654 CAMKK2Q96RR4 588 aa23.9■■□□□ 1.42
IRF1-203ENST00000437654 MCM10Q7L590 875 aa23.89■■□□□ 1.41
IRF1-203ENST00000437654 TNS1Q9HBL0 1735 aaKnown RBP23.88■■□□□ 1.41
IRF1-203ENST00000437654 TOGARAM1Q9Y4F4 1720 aa23.88■■□□□ 1.41
IRF1-203ENST00000437654 NEUROD2Q15784 382 aa23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms