RNA–Protein interactions for RNA: ENST00000437100.5

CPNE1-215, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-215ENST00000437100 KRT27Q7Z3Y8 459 aa19.78■□□□□ 0.76
CPNE1-215ENST00000437100 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.78■□□□□ 0.761e-6■■□□□ 12.2
CPNE1-215ENST00000437100 PKD1L3Q7Z443 1732 aa19.78■□□□□ 0.76
CPNE1-215ENST00000437100 SHANK3Q9BYB0 1731 aa19.77■□□□□ 0.76
CPNE1-215ENST00000437100 EXOC5O00471 708 aa19.77■□□□□ 0.76
CPNE1-215ENST00000437100 HMOX1P09601 288 aa19.77■□□□□ 0.76
CPNE1-215ENST00000437100 RSPH6AQ9H0K4 717 aa19.77■□□□□ 0.76
CPNE1-215ENST00000437100 BCL9O00512 1426 aa19.76■□□□□ 0.75
CPNE1-215ENST00000437100 ZCRB1Q8TBF4 217 aaKnown RBP19.76■□□□□ 0.75
CPNE1-215ENST00000437100 U2AF1L5P0DN76 240 aaPredicted RBP19.75■□□□□ 0.75
CPNE1-215ENST00000437100 U2AF1Q01081 240 aaKnown RBP eCLIP19.75■□□□□ 0.752e-6■□□□□ 8.5
CPNE1-215ENST00000437100 MARCH10Q8NA82 808 aaPredicted RBP19.75■□□□□ 0.75
CPNE1-215ENST00000437100 FCHSD2O94868 740 aa19.74■□□□□ 0.75
CPNE1-215ENST00000437100 PDE3BQ13370 1112 aa19.74■□□□□ 0.75
CPNE1-215ENST00000437100 CYP27B1O15528 508 aa19.72■□□□□ 0.75
CPNE1-215ENST00000437100 AMOTQ4VCS5 1084 aa19.72■□□□□ 0.75
CPNE1-215ENST00000437100 PCDH11XQ9BZA7 1347 aa19.72■□□□□ 0.75
CPNE1-215ENST00000437100 PCDH11YQ9BZA8 1340 aa19.72■□□□□ 0.75
CPNE1-215ENST00000437100 PRKAR2BP31323 418 aa19.71■□□□□ 0.75
CPNE1-215ENST00000437100 PLEKHF1Q96S99 279 aa19.71■□□□□ 0.75
CPNE1-215ENST00000437100 SPG7Q9UQ90 795 aa19.71■□□□□ 0.75
CPNE1-215ENST00000437100 PLEKHO1Q53GL0 409 aaPredicted RBP19.7■□□□□ 0.74
CPNE1-215ENST00000437100 PNISRQ8TF01 805 aaKnown RBP19.7■□□□□ 0.74
CPNE1-215ENST00000437100 MRS2Q9HD23 443 aa19.7■□□□□ 0.74
CPNE1-215ENST00000437100 FAM182BQ5T319 152 aa19.69■□□□□ 0.74
CPNE1-215ENST00000437100 CCER2I3L3R5 266 aa19.68■□□□□ 0.74
CPNE1-215ENST00000437100 PHKG2P15735 406 aa19.68■□□□□ 0.74
CPNE1-215ENST00000437100 NKX1-1Q15270 411 aaPredicted RBP19.68■□□□□ 0.74
CPNE1-215ENST00000437100 FAM196AQ6ZSG2 479 aa19.68■□□□□ 0.74
CPNE1-215ENST00000437100 PHACTR3Q96KR7 559 aa19.68■□□□□ 0.74
CPNE1-215ENST00000437100 EP400Q96L91 3159 aa19.67■□□□□ 0.74
CPNE1-215ENST00000437100 WDR43Q15061 677 aaKnown RBP eCLIP19.67■□□□□ 0.74
CPNE1-215ENST00000437100 MTHFSDQ2M296 383 aaKnown RBP19.67■□□□□ 0.74
CPNE1-215ENST00000437100 DDX54Q8TDD1 881 aaKnown RBP19.67■□□□□ 0.74
CPNE1-215ENST00000437100 ADAMTS8Q9UP79 889 aa19.67■□□□□ 0.74
CPNE1-215ENST00000437100 IFNL2Q8IZJ0 200 aa19.66■□□□□ 0.74
CPNE1-215ENST00000437100 ZNF530Q6P9A1 599 aaPredicted RBP19.65■□□□□ 0.74
CPNE1-215ENST00000437100 MIER1Q8N108 512 aa19.65■□□□□ 0.74
CPNE1-215ENST00000437100 PNNQ9H307 717 aaKnown RBP19.64■□□□□ 0.73
CPNE1-215ENST00000437100 KDM6AO15550 1401 aaPredicted RBP19.63■□□□□ 0.73
CPNE1-215ENST00000437100 AKAP4Q5JQC9 854 aa19.63■□□□□ 0.73
CPNE1-215ENST00000437100 GAS2L2Q8NHY3 880 aa19.63■□□□□ 0.73
CPNE1-215ENST00000437100 ADAMTS7Q9UKP4 1686 aa19.62■□□□□ 0.73
CPNE1-215ENST00000437100 HSP90AB1P08238 724 aaKnown RBP19.61■□□□□ 0.73
CPNE1-215ENST00000437100 TOGARAM1Q9Y4F4 1720 aa19.61■□□□□ 0.73
CPNE1-215ENST00000437100 MAP3K5Q99683 1374 aa19.6■□□□□ 0.73
CPNE1-215ENST00000437100 NHSQ6T4R5 1651 aa19.6■□□□□ 0.73
CPNE1-215ENST00000437100 C1orf141Q5JVX7 400 aa19.6■□□□□ 0.73
CPNE1-215ENST00000437100 RUNDC1Q96C34 613 aa19.6■□□□□ 0.73
CPNE1-215ENST00000437100 DCAF5Q96JK2 942 aa19.6■□□□□ 0.73
CPNE1-215ENST00000437100 UPF1Q92900 1129 aaKnown RBP eCLIP19.59■□□□□ 0.73
CPNE1-215ENST00000437100 SBF2Q86WG5 1849 aa19.59■□□□□ 0.73
CPNE1-215ENST00000437100 DOT1LQ8TEK3 1739 aa19.59■□□□□ 0.73
CPNE1-215ENST00000437100 MAPK8IP3Q9UPT6 1336 aa19.58■□□□□ 0.73
CPNE1-215ENST00000437100 NFE2L2Q16236 605 aa19.58■□□□□ 0.72
CPNE1-215ENST00000437100 PTF1AQ7RTS3 328 aa19.58■□□□□ 0.72
CPNE1-215ENST00000437100 CCDC146Q8IYE0 955 aa19.58■□□□□ 0.72
CPNE1-215ENST00000437100 BCL11BQ9C0K0 894 aaPredicted RBP19.58■□□□□ 0.72
CPNE1-215ENST00000437100 MRC1P22897 1456 aa19.58■□□□□ 0.72
CPNE1-215ENST00000437100 TNS1Q9HBL0 1735 aaKnown RBP19.57■□□□□ 0.72
CPNE1-215ENST00000437100 KCNQ2O43526 872 aa19.57■□□□□ 0.72
CPNE1-215ENST00000437100 TRIM37O94972 964 aa19.57■□□□□ 0.72
CPNE1-215ENST00000437100 ACSBG1Q96GR2 724 aa19.57■□□□□ 0.72
CPNE1-215ENST00000437100 CEMIPQ8WUJ3 1361 aa19.57■□□□□ 0.72
CPNE1-215ENST00000437100 GNAT3A8MTJ3 354 aa19.56■□□□□ 0.72
CPNE1-215ENST00000437100 MPRIPQ6WCQ1 1025 aa19.56■□□□□ 0.72
CPNE1-215ENST00000437100 CCDC125Q86Z20 511 aa19.56■□□□□ 0.72
CPNE1-215ENST00000437100 ERVV-2B6SEH9 535 aa19.55■□□□□ 0.72
CPNE1-215ENST00000437100 RNMTO43148 476 aaKnown RBP19.55■□□□□ 0.72
CPNE1-215ENST00000437100 HTATSF1O43719 755 aaKnown RBP19.55■□□□□ 0.72
CPNE1-215ENST00000437100 NEFMP07197 916 aa19.55■□□□□ 0.72
CPNE1-215ENST00000437100 PRIM1P49642 420 aaKnown RBP19.55■□□□□ 0.72
CPNE1-215ENST00000437100 TMPOP42166 694 aaKnown RBP19.54■□□□□ 0.72
CPNE1-215ENST00000437100 IL17REQ8NFR9 667 aa19.54■□□□□ 0.72
CPNE1-215ENST00000437100 LGR6Q9HBX8 967 aa19.54■□□□□ 0.72
CPNE1-215ENST00000437100 SCN11AQ9UI33 1791 aa19.52■□□□□ 0.72
CPNE1-215ENST00000437100 SOCS7O14512 581 aa19.52■□□□□ 0.72
CPNE1-215ENST00000437100 FAM9BQ8IZU0 186 aa19.52■□□□□ 0.72
CPNE1-215ENST00000437100 PIGBQ92521 554 aa19.52■□□□□ 0.72
CPNE1-215ENST00000437100 APAF1O14727 1248 aa19.51■□□□□ 0.71
CPNE1-215ENST00000437100 SLC52A2Q9HAB3 445 aa19.5■□□□□ 0.71
CPNE1-215ENST00000437100 BTAF1O14981 1849 aa19.5■□□□□ 0.71
CPNE1-215ENST00000437100 ITGB4P16144 1822 aa19.49■□□□□ 0.71
CPNE1-215ENST00000437100 RIPK4P57078 832 aa19.49■□□□□ 0.71
CPNE1-215ENST00000437100 NCBP3Q53F19 620 aaKnown RBP19.49■□□□□ 0.71
CPNE1-215ENST00000437100 SYTL4Q96C24 671 aaPredicted RBP19.49■□□□□ 0.71
CPNE1-215ENST00000437100 TMOD3Q9NYL9 352 aa19.49■□□□□ 0.71
CPNE1-215ENST00000437100 RRP7AQ9Y3A4 280 aaKnown RBP19.49■□□□□ 0.71
CPNE1-215ENST00000437100 PLSCR1O15162 318 aa19.48■□□□□ 0.71
CPNE1-215ENST00000437100 CABP4P57796 275 aa19.48■□□□□ 0.71
CPNE1-215ENST00000437100 MCM10Q7L590 875 aa19.48■□□□□ 0.71
CPNE1-215ENST00000437100 RTF1Q92541 710 aaKnown RBP19.48■□□□□ 0.71
CPNE1-215ENST00000437100 TRIM35Q9UPQ4 493 aa19.48■□□□□ 0.71
CPNE1-215ENST00000437100 DLG5Q8TDM6 1919 aa19.48■□□□□ 0.71
CPNE1-215ENST00000437100 RGPD3A6NKT7 1758 aaPredicted RBP19.47■□□□□ 0.71
CPNE1-215ENST00000437100 RGPD4Q7Z3J3 1758 aa19.47■□□□□ 0.71
CPNE1-215ENST00000437100 APBA3O96018 575 aa19.47■□□□□ 0.71
CPNE1-215ENST00000437100 DCTN1Q14203 1278 aa19.47■□□□□ 0.71
CPNE1-215ENST00000437100 LMOD3Q0VAK6 560 aa19.46■□□□□ 0.71
CPNE1-215ENST00000437100 SF3B2Q13435 895 aaKnown RBP19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms