RNA–Protein interactions for RNA: ENST00000436307.1

AP004289.1-201, humanhuman

BASIC

Gene AP004289.1, Length 2,205 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004289.1-201ENST00000436307 USP17L12C9JPN9 530 aa8.65□□□□□ -1.03
AP004289.1-201ENST00000436307 USP17L11C9JVI0 530 aa8.65□□□□□ -1.03
AP004289.1-201ENST00000436307 USP17L21D6R901 530 aa8.65□□□□□ -1.03
AP004289.1-201ENST00000436307 USP17L18D6R9N7 530 aa8.65□□□□□ -1.03
AP004289.1-201ENST00000436307 USP17L22D6RA61 530 aa8.65□□□□□ -1.03
AP004289.1-201ENST00000436307 USP17L17D6RBQ6 530 aa8.65□□□□□ -1.03
AP004289.1-201ENST00000436307 USP17L19D6RCP7 530 aa8.65□□□□□ -1.03
AP004289.1-201ENST00000436307 USP17L20D6RJB6 530 aa8.65□□□□□ -1.03
AP004289.1-201ENST00000436307 PAX3P23760 479 aa8.65□□□□□ -1.03
AP004289.1-201ENST00000436307 SOX11P35716 441 aa8.65□□□□□ -1.03
AP004289.1-201ENST00000436307 USP17L24Q0WX57 530 aa8.65□□□□□ -1.03
AP004289.1-201ENST00000436307 EAPPQ56P03 285 aaPredicted RBP8.65□□□□□ -1.03
AP004289.1-201ENST00000436307 ZNF746Q6NUN9 644 aaPredicted RBP8.65□□□□□ -1.03
AP004289.1-201ENST00000436307 LRRN4Q8WUT4 740 aa8.65□□□□□ -1.03
AP004289.1-201ENST00000436307 RIMS1Q86UR5 1692 aaKnown RBP8.65□□□□□ -1.03
AP004289.1-201ENST00000436307 ARAP3Q8WWN8 1544 aa8.64□□□□□ -1.03
AP004289.1-201ENST00000436307 BMS1Q14692 1282 aaKnown RBP8.64□□□□□ -1.03
AP004289.1-201ENST00000436307 PLEKHG6Q3KR16 790 aa8.64□□□□□ -1.03
AP004289.1-201ENST00000436307 PPP1R18Q6NYC8 613 aa8.64□□□□□ -1.03
AP004289.1-201ENST00000436307 WASHC2AQ641Q2 1341 aa8.64□□□□□ -1.03
AP004289.1-201ENST00000436307 USP17L3A6NCW0 530 aa8.64□□□□□ -1.03
AP004289.1-201ENST00000436307 USP17L4A6NCW7 530 aa8.64□□□□□ -1.03
AP004289.1-201ENST00000436307 USP17L2Q6R6M4 530 aa8.64□□□□□ -1.03
AP004289.1-201ENST00000436307 USP17L1Q7RTZ2 530 aa8.64□□□□□ -1.03
AP004289.1-201ENST00000436307 DEPDC4Q8N2C3 294 aa8.64□□□□□ -1.03
AP004289.1-201ENST00000436307 SLC43A3Q8NBI5 491 aa8.64□□□□□ -1.03
AP004289.1-201ENST00000436307 IRF2BPLQ9H1B7 796 aa8.64□□□□□ -1.03
AP004289.1-201ENST00000436307 RAB3GAP2Q9H2M9 1393 aa8.63□□□□□ -1.03
AP004289.1-201ENST00000436307 OATP04181 439 aa8.63□□□□□ -1.03
AP004289.1-201ENST00000436307 FAM9BQ8IZU0 186 aa8.63□□□□□ -1.03
AP004289.1-201ENST00000436307 GPATCH11Q8N954 259 aa8.63□□□□□ -1.03
AP004289.1-201ENST00000436307 TMEM87AQ8NBN3 555 aa8.63□□□□□ -1.03
AP004289.1-201ENST00000436307 STAG1Q8WVM7 1258 aa8.63□□□□□ -1.03
AP004289.1-201ENST00000436307 FAM196BA6NMK8 535 aa8.62□□□□□ -1.03
AP004289.1-201ENST00000436307 MAP3K7O43318 606 aa8.62□□□□□ -1.03
AP004289.1-201ENST00000436307 HNRNPUQ00839 825 aaKnown RBP eCLIP8.62□□□□□ -1.03
AP004289.1-201ENST00000436307 EN1Q05925 392 aaPredicted RBP8.62□□□□□ -1.03
AP004289.1-201ENST00000436307 GOLGA2Q08379 1002 aa8.62□□□□□ -1.03
AP004289.1-201ENST00000436307 AKT1S1Q96B36 256 aa8.62□□□□□ -1.03
AP004289.1-201ENST00000436307 UBA5Q9GZZ9 404 aa8.62□□□□□ -1.03
AP004289.1-201ENST00000436307 PCDH12Q9NPG4 1184 aa8.62□□□□□ -1.03
AP004289.1-201ENST00000436307 RAPGEF2Q9Y4G8 1499 aa8.62□□□□□ -1.03
AP004289.1-201ENST00000436307 C2orf72A6NCS6 295 aa8.62□□□□□ -1.03
AP004289.1-201ENST00000436307 RBL2Q08999 1139 aa8.62□□□□□ -1.03
AP004289.1-201ENST00000436307 ECM1Q16610 540 aa8.62□□□□□ -1.03
AP004289.1-201ENST00000436307 CCDC146Q8IYE0 955 aa8.62□□□□□ -1.03
AP004289.1-201ENST00000436307 KIF12Q96FN5 646 aa8.62□□□□□ -1.03
AP004289.1-201ENST00000436307 CCSER2Q9H7U1 834 aa8.62□□□□□ -1.03
AP004289.1-201ENST00000436307 IFT57Q9NWB7 429 aa8.62□□□□□ -1.03
AP004289.1-201ENST00000436307 PRR12Q9ULL5 1215 aa8.62□□□□□ -1.03
AP004289.1-201ENST00000436307 ADGRG1Q9Y653 693 aa8.62□□□□□ -1.03
AP004289.1-201ENST00000436307 SETD5Q9C0A6 1442 aa8.61□□□□□ -1.03
AP004289.1-201ENST00000436307 LZTS3O60299 673 aaPredicted RBP8.61□□□□□ -1.03
AP004289.1-201ENST00000436307 RAPGEF3O95398 923 aa8.61□□□□□ -1.03
AP004289.1-201ENST00000436307 FANCCQ00597 558 aa8.61□□□□□ -1.03
AP004289.1-201ENST00000436307 ARMC5Q96C12 935 aa8.61□□□□□ -1.03
AP004289.1-201ENST00000436307 EVI5O60447 810 aa8.61□□□□□ -1.03
AP004289.1-201ENST00000436307 PTK7Q13308 1070 aa8.61□□□□□ -1.03
AP004289.1-201ENST00000436307 CHADLQ6NUI6 762 aa8.61□□□□□ -1.03
AP004289.1-201ENST00000436307 FILIP1Q7Z7B0 1213 aa8.61□□□□□ -1.03
AP004289.1-201ENST00000436307 TGIF2Q9GZN2 237 aa8.61□□□□□ -1.03
AP004289.1-201ENST00000436307 NLRP2Q9NX02 1062 aa8.61□□□□□ -1.03
AP004289.1-201ENST00000436307 WASHC2CQ9Y4E1 1318 aa8.6□□□□□ -1.03
AP004289.1-201ENST00000436307 PAK3O75914 559 aaPredicted RBP8.6□□□□□ -1.03
AP004289.1-201ENST00000436307 P4HBP07237 508 aaKnown RBP8.6□□□□□ -1.03
AP004289.1-201ENST00000436307 PTMSP20962 102 aa8.6□□□□□ -1.03
AP004289.1-201ENST00000436307 SLFNL1Q499Z3 407 aa8.6□□□□□ -1.03
AP004289.1-201ENST00000436307 RBM42Q9BTD8 480 aaKnown RBP8.6□□□□□ -1.03
AP004289.1-201ENST00000436307 BRINP2Q9C0B6 783 aa8.6□□□□□ -1.03
AP004289.1-201ENST00000436307 DCTN4Q9UJW0 460 aa8.6□□□□□ -1.03
AP004289.1-201ENST00000436307 PNMA2Q9UL42 364 aa8.6□□□□□ -1.03
AP004289.1-201ENST00000436307 FOXD4Q12950 439 aaPredicted RBP8.6□□□□□ -1.03
AP004289.1-201ENST00000436307 RNF187Q5TA31 235 aaPredicted RBP8.6□□□□□ -1.03
AP004289.1-201ENST00000436307 GLYCTKQ8IVS8 523 aa8.6□□□□□ -1.03
AP004289.1-201ENST00000436307 RBM33Q96EV2 1170 aaKnown RBP8.6□□□□□ -1.03
AP004289.1-201ENST00000436307 GMLQ99445 158 aa8.6□□□□□ -1.03
AP004289.1-201ENST00000436307 OSBPL2Q9H1P3 480 aa8.6□□□□□ -1.03
AP004289.1-201ENST00000436307 RNF19AQ9NV58 838 aa8.6□□□□□ -1.03
AP004289.1-201ENST00000436307 KIAA0556O60303 1618 aa8.59□□□□□ -1.03
AP004289.1-201ENST00000436307 CARMIL1Q5VZK9 1371 aa8.59□□□□□ -1.03
AP004289.1-201ENST00000436307 FRMPD1Q5SYB0 1578 aa8.59□□□□□ -1.03
AP004289.1-201ENST00000436307 MAP3K1Q13233 1512 aa8.59□□□□□ -1.03
AP004289.1-201ENST00000436307 EIF3JO75822 258 aaKnown RBP8.59□□□□□ -1.03
AP004289.1-201ENST00000436307 CD46P15529 392 aa8.59□□□□□ -1.03
AP004289.1-201ENST00000436307 ZCRB1Q8TBF4 217 aaKnown RBP8.59□□□□□ -1.03
AP004289.1-201ENST00000436307 FAM200AQ8TCP9 573 aa8.59□□□□□ -1.03
AP004289.1-201ENST00000436307 KIF27Q86VH2 1401 aa8.59□□□□□ -1.03
AP004289.1-201ENST00000436307 HOXA2O43364 376 aa8.58□□□□□ -1.04
AP004289.1-201ENST00000436307 SH3BP5O60239 455 aa8.58□□□□□ -1.04
AP004289.1-201ENST00000436307 ICMTO60725 284 aa8.58□□□□□ -1.04
AP004289.1-201ENST00000436307 HSD3B2P26439 372 aa8.58□□□□□ -1.04
AP004289.1-201ENST00000436307 APLP1P51693 650 aa8.58□□□□□ -1.04
AP004289.1-201ENST00000436307 TBX4P57082 545 aa8.58□□□□□ -1.04
AP004289.1-201ENST00000436307 NUTM1Q86Y26 1132 aa8.58□□□□□ -1.04
AP004289.1-201ENST00000436307 CNPY4Q8N129 248 aa8.58□□□□□ -1.04
AP004289.1-201ENST00000436307 USP17L5A8MUK1 530 aa8.58□□□□□ -1.04
AP004289.1-201ENST00000436307 LONRF3Q496Y0 759 aa8.58□□□□□ -1.04
AP004289.1-201ENST00000436307 ZFYVE27Q5T4F4 411 aa8.58□□□□□ -1.04
AP004289.1-201ENST00000436307 PADI6Q6TGC4 694 aa8.58□□□□□ -1.04
AP004289.1-201ENST00000436307 UGGT2Q9NYU1 1516 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms