RNA–Protein interactions for RNA: ENST00000436040.6

APTX-208, Transcript of aprataxin, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene APTX, Length 2,168 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-208ENST00000436040 COL3A1P02461 1466 aaPredicted RBP15.49■□□□□ 0.07
APTX-208ENST00000436040 CCDC184Q52MB2 194 aa15.49■□□□□ 0.07
APTX-208ENST00000436040 USHBP1Q8N6Y0 703 aa15.49■□□□□ 0.07
APTX-208ENST00000436040 SHANK3Q9BYB0 1731 aa15.49■□□□□ 0.07
APTX-208ENST00000436040 OVOS2A0A0G2JMS6 1433 aa15.48■□□□□ 0.07
APTX-208ENST00000436040 IGSF1Q8N6C5 1336 aa15.48■□□□□ 0.07
APTX-208ENST00000436040 EXOC5O00471 708 aa15.48■□□□□ 0.07
APTX-208ENST00000436040 PKD1L3Q7Z443 1732 aa15.47■□□□□ 0.07
APTX-208ENST00000436040 IL13P35225 146 aa15.47■□□□□ 0.07
APTX-208ENST00000436040 RALBP1Q15311 655 aa15.47■□□□□ 0.07
APTX-208ENST00000436040 ERICH6Q7L0X2 663 aa15.47■□□□□ 0.07
APTX-208ENST00000436040 RAPGEF4Q8WZA2 1011 aa15.46■□□□□ 0.07
APTX-208ENST00000436040 PLEKHG2Q9H7P9 1386 aa15.46■□□□□ 0.07
APTX-208ENST00000436040 UPF1Q92900 1129 aaKnown RBP eCLIP15.46■□□□□ 0.07
APTX-208ENST00000436040 FAM196AQ6ZSG2 479 aa15.45■□□□□ 0.06
APTX-208ENST00000436040 SBF2Q86WG5 1849 aa15.45■□□□□ 0.06
APTX-208ENST00000436040 BCL9O00512 1426 aa15.45■□□□□ 0.06
APTX-208ENST00000436040 DIAPH1O60610 1272 aaKnown RBP15.45■□□□□ 0.06
APTX-208ENST00000436040 TATP17735 454 aaPredicted RBP15.45■□□□□ 0.06
APTX-208ENST00000436040 FAM182BQ5T319 152 aa15.45■□□□□ 0.06
APTX-208ENST00000436040 CFAP53Q96M91 514 aa15.45■□□□□ 0.06
APTX-208ENST00000436040 MARCH10Q8NA82 808 aaPredicted RBP15.44■□□□□ 0.06
APTX-208ENST00000436040 TNS1Q9HBL0 1735 aaKnown RBP15.43■□□□□ 0.06
APTX-208ENST00000436040 EP400Q96L91 3159 aa15.43■□□□□ 0.06
APTX-208ENST00000436040 KDRP35968 1356 aa15.43■□□□□ 0.06
APTX-208ENST00000436040 CCDC125Q86Z20 511 aa15.42■□□□□ 0.06
APTX-208ENST00000436040 ZCRB1Q8TBF4 217 aaKnown RBP15.42■□□□□ 0.06
APTX-208ENST00000436040 MYBBP1AQ9BQG0 1328 aaKnown RBP15.42■□□□□ 0.06
APTX-208ENST00000436040 MSH5O43196 834 aa15.41■□□□□ 0.06
APTX-208ENST00000436040 SULT6B1Q6IMI4 303 aa15.4■□□□□ 0.06
APTX-208ENST00000436040 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.4■□□□□ 0.061e-6■□□□□ 10.8
APTX-208ENST00000436040 NHSQ6T4R5 1651 aa15.39■□□□□ 0.05
APTX-208ENST00000436040 PCDH11XQ9BZA7 1347 aa15.39■□□□□ 0.05
APTX-208ENST00000436040 PCDH11YQ9BZA8 1340 aa15.39■□□□□ 0.05
APTX-208ENST00000436040 AEBP1Q8IUX7 1158 aa15.39■□□□□ 0.05
APTX-208ENST00000436040 DDX54Q8TDD1 881 aaKnown RBP15.38■□□□□ 0.05
APTX-208ENST00000436040 SPG7Q9UQ90 795 aa15.38■□□□□ 0.05
APTX-208ENST00000436040 DOT1LQ8TEK3 1739 aa15.38■□□□□ 0.05
APTX-208ENST00000436040 NUDCQ9Y266 331 aa15.38■□□□□ 0.05
APTX-208ENST00000436040 U2SURPO15042 1029 aaKnown RBP15.36■□□□□ 0.05
APTX-208ENST00000436040 TRIM37O94972 964 aa15.36■□□□□ 0.05
APTX-208ENST00000436040 SF3B2Q13435 895 aaKnown RBP15.36■□□□□ 0.05
APTX-208ENST00000436040 CYP27B1O15528 508 aa15.35■□□□□ 0.05
APTX-208ENST00000436040 HMOX1P09601 288 aa15.35■□□□□ 0.05
APTX-208ENST00000436040 AMOTQ4VCS5 1084 aa15.35■□□□□ 0.05
APTX-208ENST00000436040 PLEKHO1Q53GL0 409 aaPredicted RBP15.35■□□□□ 0.05
APTX-208ENST00000436040 RGPD3A6NKT7 1758 aaPredicted RBP15.35■□□□□ 0.05
APTX-208ENST00000436040 RGPD4Q7Z3J3 1758 aa15.35■□□□□ 0.05
APTX-208ENST00000436040 KAT6BQ8WYB5 2073 aa15.35■□□□□ 0.05
APTX-208ENST00000436040 TOGARAM1Q9Y4F4 1720 aa15.34■□□□□ 0.05
APTX-208ENST00000436040 SENP3-EIF4A1A0A087X0R7 540 aa15.34■□□□□ 0.05
APTX-208ENST00000436040 BCL11BQ9C0K0 894 aaPredicted RBP15.34■□□□□ 0.05
APTX-208ENST00000436040 PPP4R2Q9NY27 417 aa15.34■□□□□ 0.05
APTX-208ENST00000436040 BTAF1O14981 1849 aa15.33■□□□□ 0.05
APTX-208ENST00000436040 BAG6P46379 1132 aa15.33■□□□□ 0.04
APTX-208ENST00000436040 HNRNPUQ00839 825 aaKnown RBP eCLIP15.33■□□□□ 0.04
APTX-208ENST00000436040 NKX1-1Q15270 411 aaPredicted RBP15.33■□□□□ 0.04
APTX-208ENST00000436040 IFNL2Q8IZJ0 200 aa15.33■□□□□ 0.04
APTX-208ENST00000436040 MRS2Q9HD23 443 aa15.33■□□□□ 0.04
APTX-208ENST00000436040 PHKG2P15735 406 aa15.32■□□□□ 0.04
APTX-208ENST00000436040 ITGB4P16144 1822 aa15.32■□□□□ 0.04
APTX-208ENST00000436040 U2AF1L5P0DN76 240 aaPredicted RBP15.32■□□□□ 0.04
APTX-208ENST00000436040 U2AF1Q01081 240 aaKnown RBP eCLIP15.32■□□□□ 0.042e-8■■■■■ 37
APTX-208ENST00000436040 ZNF530Q6P9A1 599 aaPredicted RBP15.31■□□□□ 0.04
APTX-208ENST00000436040 ACSBG1Q96GR2 724 aa15.31■□□□□ 0.04
APTX-208ENST00000436040 RSPH6AQ9H0K4 717 aa15.31■□□□□ 0.04
APTX-208ENST00000436040 FCHSD2O94868 740 aa15.31■□□□□ 0.04
APTX-208ENST00000436040 VIRMAQ69YN4 1812 aaKnown RBP15.3■□□□□ 0.04
APTX-208ENST00000436040 RREB1Q92766 1687 aa15.3■□□□□ 0.04
APTX-208ENST00000436040 KCNQ2O43526 872 aa15.3■□□□□ 0.04
APTX-208ENST00000436040 APBA3O96018 575 aa15.3■□□□□ 0.04
APTX-208ENST00000436040 PTF1AQ7RTS3 328 aa15.3■□□□□ 0.04
APTX-208ENST00000436040 DEFB132Q7Z7B7 95 aa15.3■□□□□ 0.04
APTX-208ENST00000436040 HSP90AB1P08238 724 aaKnown RBP15.29■□□□□ 0.04
APTX-208ENST00000436040 SCN11AQ9UI33 1791 aa15.29■□□□□ 0.04
APTX-208ENST00000436040 PRKAR2BP31323 418 aa15.29■□□□□ 0.04
APTX-208ENST00000436040 ADAMTS8Q9UP79 889 aa15.29■□□□□ 0.04
APTX-208ENST00000436040 PRIM1P49642 420 aaKnown RBP15.28■□□□□ 0.04
APTX-208ENST00000436040 C1orf141Q5JVX7 400 aa15.28■□□□□ 0.04
APTX-208ENST00000436040 ADAMTS7Q9UKP4 1686 aa15.28■□□□□ 0.04
APTX-208ENST00000436040 PLSCR1O15162 318 aa15.28■□□□□ 0.04
APTX-208ENST00000436040 EN1Q05925 392 aaPredicted RBP15.27■□□□□ 0.04
APTX-208ENST00000436040 MTHFSDQ2M296 383 aaKnown RBP15.27■□□□□ 0.04
APTX-208ENST00000436040 AKAP4Q5JQC9 854 aa15.27■□□□□ 0.04
APTX-208ENST00000436040 FAM9BQ8IZU0 186 aa15.27■□□□□ 0.04
APTX-208ENST00000436040 PNISRQ8TF01 805 aaKnown RBP15.27■□□□□ 0.04
APTX-208ENST00000436040 DCAF5Q96JK2 942 aa15.27■□□□□ 0.04
APTX-208ENST00000436040 CAMKK2Q96RR4 588 aa15.27■□□□□ 0.04
APTX-208ENST00000436040 KDM6AO15550 1401 aaPredicted RBP15.27■□□□□ 0.03
APTX-208ENST00000436040 CCDC146Q8IYE0 955 aa15.26■□□□□ 0.03
APTX-208ENST00000436040 GAS2L2Q8NHY3 880 aa15.26■□□□□ 0.03
APTX-208ENST00000436040 NUP188Q5SRE5 1749 aa15.26■□□□□ 0.03
APTX-208ENST00000436040 SYTL4Q96C24 671 aaPredicted RBP15.26■□□□□ 0.03
APTX-208ENST00000436040 PHACTR3Q96KR7 559 aa15.26■□□□□ 0.03
APTX-208ENST00000436040 LY75O60449 1722 aa15.26■□□□□ 0.03
APTX-208ENST00000436040 PNNQ9H307 717 aaKnown RBP15.25■□□□□ 0.03
APTX-208ENST00000436040 EZH2Q15910 746 aaKnown RBP15.25■□□□□ 0.03
APTX-208ENST00000436040 ERVV-2B6SEH9 535 aa15.24■□□□□ 0.03
APTX-208ENST00000436040 MAP3K5Q99683 1374 aa15.24■□□□□ 0.03
APTX-208ENST00000436040 WDR43Q15061 677 aaKnown RBP eCLIP15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms