RNA–Protein interactions for RNA: ENST00000435702.1

AP001046.1-201, humanhuman

TSL 2 BASIC

Gene AP001046.1, Length 2,816 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001046.1-201ENST00000435702 KRT24Q2M2I5 525 aa17.06■□□□□ 0.32
AP001046.1-201ENST00000435702 WDR63Q8IWG1 891 aa17.06■□□□□ 0.32
AP001046.1-201ENST00000435702 IPO9Q96P70 1041 aaKnown RBP17.06■□□□□ 0.32
AP001046.1-201ENST00000435702 ADAMTS2O95450 1211 aa17.06■□□□□ 0.32
AP001046.1-201ENST00000435702 RLBP1P12271 317 aa17.06■□□□□ 0.32
AP001046.1-201ENST00000435702 LMO7Q8WWI1 1683 aa17.06■□□□□ 0.32
AP001046.1-201ENST00000435702 PHF23Q9BUL5 403 aaPredicted RBP17.06■□□□□ 0.32
AP001046.1-201ENST00000435702 MYH16Q9H6N6 1097 aa17.06■□□□□ 0.32
AP001046.1-201ENST00000435702 CHRNA2Q15822 529 aa17.05■□□□□ 0.32
AP001046.1-201ENST00000435702 TSPYL6Q8N831 410 aa17.05■□□□□ 0.32
AP001046.1-201ENST00000435702 SMC4Q9NTJ3 1288 aa17.05■□□□□ 0.32
AP001046.1-201ENST00000435702 NFE2L2Q16236 605 aa17.05■□□□□ 0.32
AP001046.1-201ENST00000435702 COL14A1Q05707 1796 aaKnown RBP17.05■□□□□ 0.32
AP001046.1-201ENST00000435702 PRDM11Q9NQV5 511 aa17.04■□□□□ 0.32
AP001046.1-201ENST00000435702 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.04■□□□□ 0.32
AP001046.1-201ENST00000435702 EYA1Q99502 592 aa17.04■□□□□ 0.32
AP001046.1-201ENST00000435702 RTL1A6NKG5 1358 aa17.04■□□□□ 0.32
AP001046.1-201ENST00000435702 CDK12Q9NYV4 1490 aaPredicted RBP17.04■□□□□ 0.32
AP001046.1-201ENST00000435702 ABCC6O95255 1503 aa17.04■□□□□ 0.32
AP001046.1-201ENST00000435702 PLCH1Q4KWH8 1693 aa17.03■□□□□ 0.32
AP001046.1-201ENST00000435702 RGPD5Q99666 1765 aa17.03■□□□□ 0.32
AP001046.1-201ENST00000435702 HOXC9P31274 260 aa17.03■□□□□ 0.32
AP001046.1-201ENST00000435702 KIF24Q5T7B8 1368 aa17.02■□□□□ 0.32
AP001046.1-201ENST00000435702 PDE4AP27815 886 aa17.02■□□□□ 0.32
AP001046.1-201ENST00000435702 SSH1Q8WYL5 1049 aa17.02■□□□□ 0.32
AP001046.1-201ENST00000435702 FLT4P35916 1363 aa17.02■□□□□ 0.32
AP001046.1-201ENST00000435702 IP6K1Q92551 441 aa17.02■□□□□ 0.32
AP001046.1-201ENST00000435702 ZBTB47Q9UFB7 747 aaPredicted RBP17.02■□□□□ 0.32
AP001046.1-201ENST00000435702 AXIN2Q9Y2T1 843 aa17.02■□□□□ 0.32
AP001046.1-201ENST00000435702 CAMTA1Q9Y6Y1 1673 aa17.02■□□□□ 0.31
AP001046.1-201ENST00000435702 DEKP35659 375 aaKnown RBP17.01■□□□□ 0.31
AP001046.1-201ENST00000435702 CCDC27Q2M243 656 aa17.01■□□□□ 0.31
AP001046.1-201ENST00000435702 PNNQ9H307 717 aaKnown RBP17.01■□□□□ 0.31
AP001046.1-201ENST00000435702 RGS3P49796 1198 aa16.99■□□□□ 0.31
AP001046.1-201ENST00000435702 MTHFSDQ2M296 383 aaKnown RBP16.99■□□□□ 0.31
AP001046.1-201ENST00000435702 MBIPQ9NS73 344 aa16.99■□□□□ 0.31
AP001046.1-201ENST00000435702 NRAPQ86VF7 1730 aa16.99■□□□□ 0.31
AP001046.1-201ENST00000435702 NECTIN2Q92692 538 aa16.99■□□□□ 0.31
AP001046.1-201ENST00000435702 C8orf37Q96NL8 207 aa16.99■□□□□ 0.31
AP001046.1-201ENST00000435702 SLIT2O94813 1529 aa16.99■□□□□ 0.31
AP001046.1-201ENST00000435702 MEX3CQ5U5Q3 659 aaKnown RBP16.98■□□□□ 0.31
AP001046.1-201ENST00000435702 NOB1Q9ULX3 412 aaKnown RBP16.98■□□□□ 0.31
AP001046.1-201ENST00000435702 NWD2Q9ULI1 1742 aa16.98■□□□□ 0.31
AP001046.1-201ENST00000435702 COL5A2P05997 1499 aaPredicted RBP16.97■□□□□ 0.31
AP001046.1-201ENST00000435702 C8orf58Q8NAV2 365 aa16.97■□□□□ 0.31
AP001046.1-201ENST00000435702 FTSJ3Q8IY81 847 aaKnown RBP16.97■□□□□ 0.31
AP001046.1-201ENST00000435702 NGEFQ8N5V2 710 aa16.97■□□□□ 0.31
AP001046.1-201ENST00000435702 BTG4Q9NY30 223 aa16.97■□□□□ 0.31
AP001046.1-201ENST00000435702 BACH2Q9BYV9 841 aa16.96■□□□□ 0.31
AP001046.1-201ENST00000435702 NGLY1Q96IV0 654 aa16.96■□□□□ 0.3
AP001046.1-201ENST00000435702 IGHDP01880 384 aa16.95■□□□□ 0.3
AP001046.1-201ENST00000435702 ANKRD24Q8TF21 1146 aa16.95■□□□□ 0.3
AP001046.1-201ENST00000435702 FNBP4Q8N3X1 1017 aaPredicted RBP16.95■□□□□ 0.3
AP001046.1-201ENST00000435702 ERBB3P21860 1342 aa16.95■□□□□ 0.3
AP001046.1-201ENST00000435702 BCL9LQ86UU0 1499 aa16.94■□□□□ 0.3
AP001046.1-201ENST00000435702 NBPF6Q5VWK0 638 aa16.94■□□□□ 0.3
AP001046.1-201ENST00000435702 ITPRIPQ8IWB1 547 aa16.94■□□□□ 0.3
AP001046.1-201ENST00000435702 NBPF4Q96M43 638 aa16.94■□□□□ 0.3
AP001046.1-201ENST00000435702 RGPD2P0DJD1 1756 aa16.94■□□□□ 0.3
AP001046.1-201ENST00000435702 RGPD1P0DJD0 1748 aa16.93■□□□□ 0.3
AP001046.1-201ENST00000435702 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.93■□□□□ 0.3
AP001046.1-201ENST00000435702 TRIM27P14373 513 aa16.93■□□□□ 0.3
AP001046.1-201ENST00000435702 AFF2P51816 1311 aa16.93■□□□□ 0.3
AP001046.1-201ENST00000435702 FAM208AQ9UK61 1670 aaKnown RBP16.93■□□□□ 0.3
AP001046.1-201ENST00000435702 STRN4Q9NRL3 753 aa16.92■□□□□ 0.3
AP001046.1-201ENST00000435702 RTF1Q92541 710 aaKnown RBP16.92■□□□□ 0.3
AP001046.1-201ENST00000435702 WDR17Q8IZU2 1322 aa16.91■□□□□ 0.3
AP001046.1-201ENST00000435702 TWISTNBQ3B726 338 aaPredicted RBP16.91■□□□□ 0.3
AP001046.1-201ENST00000435702 EVA1CP58658 441 aa16.91■□□□□ 0.3
AP001046.1-201ENST00000435702 ZKSCAN2Q63HK3 967 aa16.91■□□□□ 0.3
AP001046.1-201ENST00000435702 LARP1Q6PKG0 1096 aaKnown RBP16.91■□□□□ 0.3
AP001046.1-201ENST00000435702 UNC5CLQ8IV45 518 aa16.9■□□□□ 0.3
AP001046.1-201ENST00000435702 C1orf115Q9H7X2 142 aa16.9■□□□□ 0.3
AP001046.1-201ENST00000435702 USP21Q9UK80 565 aa16.9■□□□□ 0.3
AP001046.1-201ENST00000435702 PCDHB15Q9Y5E8 787 aa16.9■□□□□ 0.3
AP001046.1-201ENST00000435702 CSB-PGBD3P0DP91 1061 aa16.89■□□□□ 0.29
AP001046.1-201ENST00000435702 GNAI1P63096 354 aa16.89■□□□□ 0.29
AP001046.1-201ENST00000435702 DZIP1LQ8IYY4 767 aaKnown RBP16.89■□□□□ 0.29
AP001046.1-201ENST00000435702 TMEM57Q8N5G2 664 aa16.89■□□□□ 0.29
AP001046.1-201ENST00000435702 VAMP4O75379 141 aa16.89■□□□□ 0.29
AP001046.1-201ENST00000435702 CRB1P82279 1406 aa16.88■□□□□ 0.29
AP001046.1-201ENST00000435702 NCAPD2Q15021 1401 aa16.88■□□□□ 0.29
AP001046.1-201ENST00000435702 CFAP44Q96MT7 982 aa16.88■□□□□ 0.29
AP001046.1-201ENST00000435702 IGSF1Q8N6C5 1336 aa16.88■□□□□ 0.29
AP001046.1-201ENST00000435702 SLC4A3P48751 1232 aa16.88■□□□□ 0.29
AP001046.1-201ENST00000435702 ZNF428Q96B54 188 aa16.88■□□□□ 0.29
AP001046.1-201ENST00000435702 TOM1L2Q6ZVM7 507 aa16.87■□□□□ 0.29
AP001046.1-201ENST00000435702 NLRP2Q9NX02 1062 aa16.87■□□□□ 0.29
AP001046.1-201ENST00000435702 TSPYL4Q9UJ04 414 aa16.87■□□□□ 0.29
AP001046.1-201ENST00000435702 ATRNO75882 1429 aa16.86■□□□□ 0.29
AP001046.1-201ENST00000435702 MS4A1P11836 297 aa16.86■□□□□ 0.29
AP001046.1-201ENST00000435702 LGR6Q9HBX8 967 aa16.86■□□□□ 0.29
AP001046.1-201ENST00000435702 IFT57Q9NWB7 429 aa16.86■□□□□ 0.29
AP001046.1-201ENST00000435702 KDM2BQ8NHM5 1336 aa16.86■□□□□ 0.29
AP001046.1-201ENST00000435702 PDE3AQ14432 1141 aa16.86■□□□□ 0.29
AP001046.1-201ENST00000435702 VPS72Q15906 364 aa16.86■□□□□ 0.29
AP001046.1-201ENST00000435702 ATF7IPQ6VMQ6 1270 aa16.86■□□□□ 0.29
AP001046.1-201ENST00000435702 MPRIPQ6WCQ1 1025 aa16.86■□□□□ 0.29
AP001046.1-201ENST00000435702 CARD10Q9BWT7 1032 aa16.85■□□□□ 0.29
AP001046.1-201ENST00000435702 LMOD3Q0VAK6 560 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms