RNA–Protein interactions for RNA: ENST00000435039.3

PCOTH-203, Transcript of Pro-X-Gly collagen triple helix like repeat containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCOTH, Length 542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOTH-203ENST00000435039 WNK3Q9BYP7 1800 aa14.88□□□□□ -0.03
PCOTH-203ENST00000435039 LMOD3Q0VAK6 560 aa14.88□□□□□ -0.03
PCOTH-203ENST00000435039 CHRNA2Q15822 529 aa14.88□□□□□ -0.03
PCOTH-203ENST00000435039 CCDC125Q86Z20 511 aa14.88□□□□□ -0.03
PCOTH-203ENST00000435039 WWC1Q8IX03 1113 aa14.88□□□□□ -0.03
PCOTH-203ENST00000435039 GOLGA2Q08379 1002 aa14.87□□□□□ -0.03
PCOTH-203ENST00000435039 NBPF6Q5VWK0 638 aa14.87□□□□□ -0.03
PCOTH-203ENST00000435039 PHACTR3Q96KR7 559 aa14.87□□□□□ -0.03
PCOTH-203ENST00000435039 NBPF4Q96M43 638 aa14.87□□□□□ -0.03
PCOTH-203ENST00000435039 RRP7AQ9Y3A4 280 aaKnown RBP14.87□□□□□ -0.03
PCOTH-203ENST00000435039 WDR17Q8IZU2 1322 aa14.87□□□□□ -0.03
PCOTH-203ENST00000435039 WDR63Q8IWG1 891 aa14.86□□□□□ -0.03
PCOTH-203ENST00000435039 GAS2L2Q8NHY3 880 aa14.86□□□□□ -0.03
PCOTH-203ENST00000435039 E9PSI1 815 aa14.85□□□□□ -0.03
PCOTH-203ENST00000435039 RIPK4P57078 832 aa14.85□□□□□ -0.03
PCOTH-203ENST00000435039 TRIM35Q9UPQ4 493 aa14.85□□□□□ -0.03
PCOTH-203ENST00000435039 IL16Q14005 1332 aa14.85□□□□□ -0.03
PCOTH-203ENST00000435039 MEGF6O75095 1541 aa14.84□□□□□ -0.03
PCOTH-203ENST00000435039 NEUROD2Q15784 382 aa14.84□□□□□ -0.03
PCOTH-203ENST00000435039 VPS72Q15906 364 aa14.84□□□□□ -0.03
PCOTH-203ENST00000435039 USHBP1Q8N6Y0 703 aa14.84□□□□□ -0.03
PCOTH-203ENST00000435039 ADAMTS7Q9UKP4 1686 aa14.84□□□□□ -0.03
PCOTH-203ENST00000435039 CRB1P82279 1406 aa14.83□□□□□ -0.03
PCOTH-203ENST00000435039 CSB-PGBD3P0DP91 1061 aa14.83□□□□□ -0.04
PCOTH-203ENST00000435039 CALD1Q05682 793 aaKnown RBP14.83□□□□□ -0.04
PCOTH-203ENST00000435039 MAP3K5Q99683 1374 aa14.83□□□□□ -0.04
PCOTH-203ENST00000435039 OVOS2A0A0G2JMS6 1433 aa14.83□□□□□ -0.04
PCOTH-203ENST00000435039 VIRMAQ69YN4 1812 aaKnown RBP14.82□□□□□ -0.04
PCOTH-203ENST00000435039 SLFN5Q08AF3 891 aa14.82□□□□□ -0.04
PCOTH-203ENST00000435039 SEPT12Q8IYM1 358 aa14.82□□□□□ -0.04
PCOTH-203ENST00000435039 CDCA7LQ96GN5 454 aa14.82□□□□□ -0.04
PCOTH-203ENST00000435039 FAM83GA6ND36 823 aa14.81□□□□□ -0.04
PCOTH-203ENST00000435039 ONECUT3O60422 494 aaPredicted RBP14.81□□□□□ -0.04
PCOTH-203ENST00000435039 DUSP27Q5VZP5 1158 aa14.81□□□□□ -0.04
PCOTH-203ENST00000435039 TRMT2AQ8IZ69 625 aaKnown RBP14.81□□□□□ -0.04
PCOTH-203ENST00000435039 NLRP2Q9NX02 1062 aa14.81□□□□□ -0.04
PCOTH-203ENST00000435039 SHANK3Q9BYB0 1731 aa14.8□□□□□ -0.04
PCOTH-203ENST00000435039 MTHFSDQ2M296 383 aaKnown RBP14.8□□□□□ -0.04
PCOTH-203ENST00000435039 AMOTQ4VCS5 1084 aa14.8□□□□□ -0.04
PCOTH-203ENST00000435039 HTATSF1O43719 755 aaKnown RBP14.79□□□□□ -0.04
PCOTH-203ENST00000435039 RAPGEF4Q8WZA2 1011 aa14.79□□□□□ -0.04
PCOTH-203ENST00000435039 CARD10Q9BWT7 1032 aa14.79□□□□□ -0.04
PCOTH-203ENST00000435039 MYH16Q9H6N6 1097 aa14.79□□□□□ -0.04
PCOTH-203ENST00000435039 BTG4Q9NY30 223 aa14.79□□□□□ -0.04
PCOTH-203ENST00000435039 CCDC9Q9Y3X0 531 aaKnown RBP14.79□□□□□ -0.04
PCOTH-203ENST00000435039 PLEKHO1Q53GL0 409 aaPredicted RBP14.78□□□□□ -0.04
PCOTH-203ENST00000435039 TOM1L2Q6ZVM7 507 aa14.78□□□□□ -0.04
PCOTH-203ENST00000435039 DEFB132Q7Z7B7 95 aa14.78□□□□□ -0.04
PCOTH-203ENST00000435039 SPINK5Q9NQ38 1064 aaPredicted RBP14.78□□□□□ -0.04
PCOTH-203ENST00000435039 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.78□□□□□ -0.04
PCOTH-203ENST00000435039 SCN11AQ9UI33 1791 aa14.78□□□□□ -0.04
PCOTH-203ENST00000435039 DISP2A7MBM2 1401 aa14.77□□□□□ -0.04
PCOTH-203ENST00000435039 FANCIQ9NVI1 1328 aa14.77□□□□□ -0.04
PCOTH-203ENST00000435039 TATP17735 454 aaPredicted RBP14.77□□□□□ -0.05
PCOTH-203ENST00000435039 KRT27Q7Z3Y8 459 aa14.77□□□□□ -0.05
PCOTH-203ENST00000435039 IFT57Q9NWB7 429 aa14.77□□□□□ -0.05
PCOTH-203ENST00000435039 SIPA1L3O60292 1781 aaPredicted RBP14.77□□□□□ -0.05
PCOTH-203ENST00000435039 MRC1P22897 1456 aa14.76□□□□□ -0.05
PCOTH-203ENST00000435039 GNAT3A8MTJ3 354 aa14.76□□□□□ -0.05
PCOTH-203ENST00000435039 LARP1Q6PKG0 1096 aaKnown RBP14.76□□□□□ -0.05
PCOTH-203ENST00000435039 RTF1Q92541 710 aaKnown RBP14.76□□□□□ -0.05
PCOTH-203ENST00000435039 STRN4Q9NRL3 753 aa14.76□□□□□ -0.05
PCOTH-203ENST00000435039 KDM3BQ7LBC6 1761 aa14.75□□□□□ -0.05
PCOTH-203ENST00000435039 CEMIPQ8WUJ3 1361 aa14.75□□□□□ -0.05
PCOTH-203ENST00000435039 EVA1CP58658 441 aa14.75□□□□□ -0.05
PCOTH-203ENST00000435039 AKAP4Q5JQC9 854 aa14.75□□□□□ -0.05
PCOTH-203ENST00000435039 ZNF530Q6P9A1 599 aaPredicted RBP14.75□□□□□ -0.05
PCOTH-203ENST00000435039 GNAI1P63096 354 aa14.74□□□□□ -0.05
PCOTH-203ENST00000435039 SF3B2Q13435 895 aaKnown RBP14.74□□□□□ -0.05
PCOTH-203ENST00000435039 SPG7Q9UQ90 795 aa14.74□□□□□ -0.05
PCOTH-203ENST00000435039 THSD7AQ9UPZ6 1657 aa14.74□□□□□ -0.05
PCOTH-203ENST00000435039 CT47B1P0C2W7 299 aaPredicted RBP14.73□□□□□ -0.05
PCOTH-203ENST00000435039 ZNF853P0CG23 659 aa14.73□□□□□ -0.05
PCOTH-203ENST00000435039 FAM98CQ17RN3 349 aaKnown RBP14.73□□□□□ -0.05
PCOTH-203ENST00000435039 C1orf141Q5JVX7 400 aa14.73□□□□□ -0.05
PCOTH-203ENST00000435039 CFAP44Q96MT7 982 aa14.73□□□□□ -0.05
PCOTH-203ENST00000435039 THUMPD2Q9BTF0 503 aaKnown RBP14.73□□□□□ -0.05
PCOTH-203ENST00000435039 TNS2Q63HR2 1409 aa14.73□□□□□ -0.05
PCOTH-203ENST00000435039 RNF123Q5XPI4 1314 aa14.72□□□□□ -0.05
PCOTH-203ENST00000435039 PCDH11XQ9BZA7 1347 aa14.72□□□□□ -0.05
PCOTH-203ENST00000435039 PCDH11YQ9BZA8 1340 aa14.72□□□□□ -0.05
PCOTH-203ENST00000435039 A0A0G2JS52 829 aa14.72□□□□□ -0.05
PCOTH-203ENST00000435039 IL2RBP14784 551 aa14.72□□□□□ -0.05
PCOTH-203ENST00000435039 MYT1Q01538 1121 aa14.72□□□□□ -0.05
PCOTH-203ENST00000435039 MCM10Q7L590 875 aa14.72□□□□□ -0.05
PCOTH-203ENST00000435039 RCAN3Q9UKA8 241 aa14.72□□□□□ -0.05
PCOTH-203ENST00000435039 LRP5O75197 1615 aa14.72□□□□□ -0.05
PCOTH-203ENST00000435039 SPATA31A5Q5VU36 1347 aa14.71□□□□□ -0.05
PCOTH-203ENST00000435039 SPATA31A7Q8IWB4 1347 aa14.71□□□□□ -0.05
PCOTH-203ENST00000435039 DCTN1Q14203 1278 aa14.71□□□□□ -0.05
PCOTH-203ENST00000435039 KDM6AO15550 1401 aaPredicted RBP14.71□□□□□ -0.05
PCOTH-203ENST00000435039 TNS1Q9HBL0 1735 aaKnown RBP14.7□□□□□ -0.06
PCOTH-203ENST00000435039 TSR2Q969E8 191 aaKnown RBP14.7□□□□□ -0.06
PCOTH-203ENST00000435039 BABAM1Q9NWV8 329 aa14.7□□□□□ -0.06
PCOTH-203ENST00000435039 THRAP3Q9Y2W1 955 aaKnown RBP14.7□□□□□ -0.06
PCOTH-203ENST00000435039 TOGARAM1Q9Y4F4 1720 aa14.69□□□□□ -0.06
PCOTH-203ENST00000435039 SPATA31A1Q5TZJ5 1347 aa14.69□□□□□ -0.06
PCOTH-203ENST00000435039 HSP90AB1P08238 724 aaKnown RBP14.69□□□□□ -0.06
PCOTH-203ENST00000435039 PHKG2P15735 406 aa14.69□□□□□ -0.06
PCOTH-203ENST00000435039 CDCA7Q9BWT1 371 aaPredicted RBP14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms