RNA–Protein interactions for RNA: ENST00000434927.5

RBM39-214, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 716 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-214ENST00000434927 FBLN1P23142 703 aa13.02□□□□□ -0.33
RBM39-214ENST00000434927 DDX54Q8TDD1 881 aaKnown RBP13.02□□□□□ -0.33
RBM39-214ENST00000434927 ATF5Q9Y2D1 282 aaPredicted RBP13.02□□□□□ -0.33
RBM39-214ENST00000434927 MAP3K5Q99683 1374 aa13.02□□□□□ -0.33
RBM39-214ENST00000434927 SMG6Q86US8 1419 aaKnown RBP13.02□□□□□ -0.33
RBM39-214ENST00000434927 LY75O60449 1722 aa13.02□□□□□ -0.33
RBM39-214ENST00000434927 DOT1LQ8TEK3 1739 aa13.02□□□□□ -0.33
RBM39-214ENST00000434927 RRS1Q15050 365 aaKnown RBP13.01□□□□□ -0.33
RBM39-214ENST00000434927 ZNF827Q17R98 1081 aa13.01□□□□□ -0.33
RBM39-214ENST00000434927 ZCRB1Q8TBF4 217 aaKnown RBP13.01□□□□□ -0.33
RBM39-214ENST00000434927 AKT1S1Q96B36 256 aa13.01□□□□□ -0.33
RBM39-214ENST00000434927 GGNBP2Q9H3C7 697 aa13.01□□□□□ -0.33
RBM39-214ENST00000434927 NSD2O96028 1365 aa13.01□□□□□ -0.33
RBM39-214ENST00000434927 COL24A1Q17RW2 1714 aa13□□□□□ -0.33
RBM39-214ENST00000434927 INSRP06213 1382 aa13□□□□□ -0.33
RBM39-214ENST00000434927 FLT4P35916 1363 aa13□□□□□ -0.33
RBM39-214ENST00000434927 NBPF6Q5VWK0 638 aa13□□□□□ -0.33
RBM39-214ENST00000434927 SLC16A10Q8TF71 515 aa13□□□□□ -0.33
RBM39-214ENST00000434927 NBPF4Q96M43 638 aa13□□□□□ -0.33
RBM39-214ENST00000434927 SYT17Q9BSW7 474 aa13□□□□□ -0.33
RBM39-214ENST00000434927 CLSPNQ9HAW4 1339 aa12.99□□□□□ -0.33
RBM39-214ENST00000434927 PRIM1P49642 420 aaKnown RBP12.99□□□□□ -0.33
RBM39-214ENST00000434927 FHDC1Q9C0D6 1143 aaPredicted RBP12.99□□□□□ -0.33
RBM39-214ENST00000434927 ARXQ96QS3 562 aa12.98□□□□□ -0.33
RBM39-214ENST00000434927 PNPLA7Q6ZV29 1317 aa12.97□□□□□ -0.33
RBM39-214ENST00000434927 RAPGEF4Q8WZA2 1011 aa12.97□□□□□ -0.33
RBM39-214ENST00000434927 SYTL4Q96C24 671 aaPredicted RBP12.97□□□□□ -0.33
RBM39-214ENST00000434927 TUBGCP6Q96RT7 1819 aa12.97□□□□□ -0.33
RBM39-214ENST00000434927 NCAPD2Q15021 1401 aa12.96□□□□□ -0.33
RBM39-214ENST00000434927 ANKRD26Q9UPS8 1709 aa12.96□□□□□ -0.33
RBM39-214ENST00000434927 TATP17735 454 aaPredicted RBP12.96□□□□□ -0.33
RBM39-214ENST00000434927 HSP90AB2PQ58FF8 381 aa12.96□□□□□ -0.33
RBM39-214ENST00000434927 CARD14Q9BXL6 1004 aa12.96□□□□□ -0.33
RBM39-214ENST00000434927 NSD3Q9BZ95 1437 aa12.96□□□□□ -0.34
RBM39-214ENST00000434927 PCDH11XQ9BZA7 1347 aa12.95□□□□□ -0.34
RBM39-214ENST00000434927 PCDH11YQ9BZA8 1340 aa12.95□□□□□ -0.34
RBM39-214ENST00000434927 HMGB2P26583 209 aaKnown RBP12.95□□□□□ -0.34
RBM39-214ENST00000434927 UTRNP46939 3433 aa12.95□□□□□ -0.34
RBM39-214ENST00000434927 PKD1L3Q7Z443 1732 aa12.94□□□□□ -0.34
RBM39-214ENST00000434927 USHBP1Q8N6Y0 703 aa12.94□□□□□ -0.34
RBM39-214ENST00000434927 TFCP2L1Q9NZI6 479 aa12.94□□□□□ -0.34
RBM39-214ENST00000434927 CCNL1Q9UK58 526 aaPredicted RBP12.94□□□□□ -0.34
RBM39-214ENST00000434927 CHD4Q14839 1912 aa12.94□□□□□ -0.34
RBM39-214ENST00000434927 POLD1P28340 1107 aa12.93□□□□□ -0.34
RBM39-214ENST00000434927 EMILIN1Q9Y6C2 1016 aa12.92□□□□□ -0.34
RBM39-214ENST00000434927 PLEKHG2Q9H7P9 1386 aa12.92□□□□□ -0.34
RBM39-214ENST00000434927 WASHC2AQ641Q2 1341 aa12.91□□□□□ -0.34
RBM39-214ENST00000434927 CYP27B1O15528 508 aa12.91□□□□□ -0.34
RBM39-214ENST00000434927 KCNQ4P56696 695 aa12.91□□□□□ -0.34
RBM39-214ENST00000434927 C5P01031 1676 aa12.91□□□□□ -0.34
RBM39-214ENST00000434927 TOGARAM1Q9Y4F4 1720 aa12.91□□□□□ -0.34
RBM39-214ENST00000434927 MAP2P11137 1827 aaKnown RBP12.9□□□□□ -0.34
RBM39-214ENST00000434927 TAF1LQ8IZX4 1826 aa12.9□□□□□ -0.34
RBM39-214ENST00000434927 NKX1-1Q15270 411 aaPredicted RBP12.9□□□□□ -0.34
RBM39-214ENST00000434927 PALLDQ8WX93 1383 aa12.9□□□□□ -0.34
RBM39-214ENST00000434927 ITGB4P16144 1822 aa12.9□□□□□ -0.34
RBM39-214ENST00000434927 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.89□□□□□ -0.356e-26■■□□□ 14.2
RBM39-214ENST00000434927 COL23A1Q86Y22 540 aaPredicted RBP12.88□□□□□ -0.35
RBM39-214ENST00000434927 ZNF784Q8NCA9 323 aaPredicted RBP12.88□□□□□ -0.35
RBM39-214ENST00000434927 FLAD1Q8NFF5 587 aa12.88□□□□□ -0.35
RBM39-214ENST00000434927 SMARCC1Q92922 1105 aaPredicted RBP12.88□□□□□ -0.35
RBM39-214ENST00000434927 EYA1Q99502 592 aa12.87□□□□□ -0.35
RBM39-214ENST00000434927 POLKQ9UBT6 870 aa12.87□□□□□ -0.35
RBM39-214ENST00000434927 SPG7Q9UQ90 795 aa12.87□□□□□ -0.35
RBM39-214ENST00000434927 C4BP0C0L5 1744 aa12.86□□□□□ -0.35
RBM39-214ENST00000434927 MPRIPQ6WCQ1 1025 aa12.86□□□□□ -0.35
RBM39-214ENST00000434927 PPM1GO15355 546 aaPredicted RBP12.85□□□□□ -0.35
RBM39-214ENST00000434927 GPR162Q16538 588 aa12.85□□□□□ -0.35
RBM39-214ENST00000434927 PIGBQ92521 554 aa12.85□□□□□ -0.35
RBM39-214ENST00000434927 EIF4G2P78344 907 aaKnown RBP eCLIP12.84□□□□□ -0.35
RBM39-214ENST00000434927 UBR3Q6ZT12 1888 aa12.84□□□□□ -0.35
RBM39-214ENST00000434927 PHKG2P15735 406 aa12.83□□□□□ -0.36
RBM39-214ENST00000434927 IFNL2Q8IZJ0 200 aa12.83□□□□□ -0.36
RBM39-214ENST00000434927 KLHL34Q8N239 644 aa12.83□□□□□ -0.36
RBM39-214ENST00000434927 NLGN2Q8NFZ4 835 aa12.83□□□□□ -0.36
RBM39-214ENST00000434927 PCGF6Q9BYE7 350 aa12.83□□□□□ -0.36
RBM39-214ENST00000434927 IGSF1Q8N6C5 1336 aa12.83□□□□□ -0.36
RBM39-214ENST00000434927 EIF4A2Q14240 407 aaKnown RBP12.82□□□□□ -0.36
RBM39-214ENST00000434927 CD2APQ9Y5K6 639 aa12.82□□□□□ -0.36
RBM39-214ENST00000434927 LOC102724428A0A0B4J2F2 783 aa12.81□□□□□ -0.36
RBM39-214ENST00000434927 GRIN3BO60391 1043 aa12.81□□□□□ -0.36
RBM39-214ENST00000434927 HSPA5P11021 654 aaKnown RBP12.81□□□□□ -0.36
RBM39-214ENST00000434927 SSFA2P28290 1259 aa12.81□□□□□ -0.36
RBM39-214ENST00000434927 SIK1P57059 783 aa12.81□□□□□ -0.36
RBM39-214ENST00000434927 AK7Q96M32 723 aa12.81□□□□□ -0.36
RBM39-214ENST00000434927 TMOD3Q9NYL9 352 aa12.81□□□□□ -0.36
RBM39-214ENST00000434927 GOLGB1Q14789 3259 aaKnown RBP12.81□□□□□ -0.36
RBM39-214ENST00000434927 ZNF831Q5JPB2 1677 aa12.8□□□□□ -0.36
RBM39-214ENST00000434927 MSL1Q68DK7 614 aa12.8□□□□□ -0.36
RBM39-214ENST00000434927 PANK3Q9H999 370 aa12.8□□□□□ -0.36
RBM39-214ENST00000434927 YBX3P16989 372 aaKnown RBP eCLIP12.79□□□□□ -0.36
RBM39-214ENST00000434927 AMIGO3Q86WK7 504 aa12.79□□□□□ -0.36
RBM39-214ENST00000434927 POLR3GLQ9BT43 218 aa12.79□□□□□ -0.36
RBM39-214ENST00000434927 KDRP35968 1356 aa12.79□□□□□ -0.36
RBM39-214ENST00000434927 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.78□□□□□ -0.36
RBM39-214ENST00000434927 ERVV-2B6SEH9 535 aa12.78□□□□□ -0.36
RBM39-214ENST00000434927 HSP90AB1P08238 724 aaKnown RBP12.78□□□□□ -0.36
RBM39-214ENST00000434927 TNNT2P45379 298 aaPredicted RBP12.78□□□□□ -0.36
RBM39-214ENST00000434927 PELP1Q8IZL8 1130 aaKnown RBP12.78□□□□□ -0.36
RBM39-214ENST00000434927 LINC00116Q8NCU8 138 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms