RNA–Protein interactions for RNA: ENST00000434073.1

PCDH9-AS3-201, PCDH9 antisense RNA 3, humanhuman

TSL 2 BASIC

Gene PCDH9-AS3, Length 479 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-AS3-201ENST00000434073 C6orf118Q5T5N4 469 aa9.21□□□□□ -0.94
PCDH9-AS3-201ENST00000434073 AGBL1Q96MI9 1066 aa9.21□□□□□ -0.94
PCDH9-AS3-201ENST00000434073 LZTS3O60299 673 aaPredicted RBP9.2□□□□□ -0.94
PCDH9-AS3-201ENST00000434073 SNRPBP14678 240 aaKnown RBP9.2□□□□□ -0.94
PCDH9-AS3-201ENST00000434073 PTGIRP43119 386 aa9.2□□□□□ -0.94
PCDH9-AS3-201ENST00000434073 USP4Q13107 963 aa9.2□□□□□ -0.94
PCDH9-AS3-201ENST00000434073 SKIP12755 728 aa9.19□□□□□ -0.94
PCDH9-AS3-201ENST00000434073 RELBQ01201 579 aa9.19□□□□□ -0.94
PCDH9-AS3-201ENST00000434073 OXLD1Q5BKU9 147 aa9.19□□□□□ -0.94
PCDH9-AS3-201ENST00000434073 PLEKHM2Q8IWE5 1019 aa9.19□□□□□ -0.94
PCDH9-AS3-201ENST00000434073 SIRT1Q96EB6 747 aa9.19□□□□□ -0.94
PCDH9-AS3-201ENST00000434073 CALR3Q96L12 384 aaKnown RBP9.19□□□□□ -0.94
PCDH9-AS3-201ENST00000434073 SOS2Q07890 1332 aaPredicted RBP9.19□□□□□ -0.94
PCDH9-AS3-201ENST00000434073 USP17L5A8MUK1 530 aa9.18□□□□□ -0.94
PCDH9-AS3-201ENST00000434073 ATP9BO43861 1147 aa9.18□□□□□ -0.94
PCDH9-AS3-201ENST00000434073 TBC1D9Q6ZT07 1266 aa9.17□□□□□ -0.94
PCDH9-AS3-201ENST00000434073 C14orf37Q86TY3 774 aa9.17□□□□□ -0.94
PCDH9-AS3-201ENST00000434073 ESF1Q9H501 851 aaKnown RBP9.17□□□□□ -0.94
PCDH9-AS3-201ENST00000434073 ZNF777Q9ULD5 760 aaPredicted RBP9.17□□□□□ -0.94
PCDH9-AS3-201ENST00000434073 GNRH1P01148 92 aa9.16□□□□□ -0.94
PCDH9-AS3-201ENST00000434073 EML3Q32P44 896 aa9.16□□□□□ -0.94
PCDH9-AS3-201ENST00000434073 ERICH6Q7L0X2 663 aa9.16□□□□□ -0.94
PCDH9-AS3-201ENST00000434073 INSM2Q96T92 566 aaPredicted RBP9.16□□□□□ -0.94
PCDH9-AS3-201ENST00000434073 ZNF395Q9H8N7 513 aaPredicted RBP9.16□□□□□ -0.94
PCDH9-AS3-201ENST00000434073 USP17L3A6NCW0 530 aa9.15□□□□□ -0.94
PCDH9-AS3-201ENST00000434073 USP17L4A6NCW7 530 aa9.15□□□□□ -0.94
PCDH9-AS3-201ENST00000434073 TTLL8A6PVC2 850 aa9.15□□□□□ -0.94
PCDH9-AS3-201ENST00000434073 CTSOP43234 321 aaPredicted RBP9.15□□□□□ -0.94
PCDH9-AS3-201ENST00000434073 CLN3Q13286 438 aa9.15□□□□□ -0.94
PCDH9-AS3-201ENST00000434073 NCOA4Q13772 614 aa9.15□□□□□ -0.94
PCDH9-AS3-201ENST00000434073 USP17L2Q6R6M4 530 aa9.15□□□□□ -0.94
PCDH9-AS3-201ENST00000434073 USP17L1Q7RTZ2 530 aa9.15□□□□□ -0.94
PCDH9-AS3-201ENST00000434073 A0A1W2PRU2 124 aa9.14□□□□□ -0.95
PCDH9-AS3-201ENST00000434073 FOXD4L5Q5VV16 416 aaPredicted RBP9.14□□□□□ -0.95
PCDH9-AS3-201ENST00000434073 RNF217Q8TC41 542 aa9.14□□□□□ -0.95
PCDH9-AS3-201ENST00000434073 PPP1R12CQ9BZL4 782 aa9.14□□□□□ -0.95
PCDH9-AS3-201ENST00000434073 ARHGEF10LQ9HCE6 1279 aa9.14□□□□□ -0.95
PCDH9-AS3-201ENST00000434073 DNMT3LQ9UJW3 386 aa9.14□□□□□ -0.95
PCDH9-AS3-201ENST00000434073 MAFBQ9Y5Q3 323 aaPredicted RBP9.14□□□□□ -0.95
PCDH9-AS3-201ENST00000434073 PALM3A6NDB9 673 aaPredicted RBP9.13□□□□□ -0.95
PCDH9-AS3-201ENST00000434073 GPC1P35052 558 aa9.13□□□□□ -0.95
PCDH9-AS3-201ENST00000434073 POLMQ9NP87 494 aaPredicted RBP9.13□□□□□ -0.95
PCDH9-AS3-201ENST00000434073 NOD1Q9Y239 953 aa9.13□□□□□ -0.95
PCDH9-AS3-201ENST00000434073 WASLO00401 505 aaPredicted RBP9.12□□□□□ -0.95
PCDH9-AS3-201ENST00000434073 MAN1A2O60476 641 aa9.12□□□□□ -0.95
PCDH9-AS3-201ENST00000434073 RNF144AP50876 292 aaPredicted RBP9.12□□□□□ -0.95
PCDH9-AS3-201ENST00000434073 DEPDC4Q8N2C3 294 aa9.12□□□□□ -0.95
PCDH9-AS3-201ENST00000434073 TFIP11Q9UBB9 837 aaKnown RBP9.12□□□□□ -0.95
PCDH9-AS3-201ENST00000434073 PCDHGA11Q9Y5H2 935 aa9.12□□□□□ -0.95
PCDH9-AS3-201ENST00000434073 IL2RAP01589 272 aa9.11□□□□□ -0.95
PCDH9-AS3-201ENST00000434073 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.11□□□□□ -0.95
PCDH9-AS3-201ENST00000434073 ETNK1Q9HBU6 452 aa9.11□□□□□ -0.95
PCDH9-AS3-201ENST00000434073 HRH3Q9Y5N1 445 aa9.11□□□□□ -0.95
PCDH9-AS3-201ENST00000434073 MEN1O00255 615 aa9.1□□□□□ -0.95
PCDH9-AS3-201ENST00000434073 SCNN1DP51172 638 aa9.1□□□□□ -0.95
PCDH9-AS3-201ENST00000434073 GTF2IP78347 998 aa9.1□□□□□ -0.95
PCDH9-AS3-201ENST00000434073 ESCO1Q5FWF5 840 aa9.1□□□□□ -0.95
PCDH9-AS3-201ENST00000434073 TRIM50Q86XT4 487 aa9.1□□□□□ -0.95
PCDH9-AS3-201ENST00000434073 XAGE2Q96GT9 111 aa9.1□□□□□ -0.95
PCDH9-AS3-201ENST00000434073 ESYT1Q9BSJ8 1104 aa9.1□□□□□ -0.95
PCDH9-AS3-201ENST00000434073 RAB6BQ9NRW1 208 aa9.1□□□□□ -0.95
PCDH9-AS3-201ENST00000434073 SOBPA7XYQ1 873 aa9.09□□□□□ -0.95
PCDH9-AS3-201ENST00000434073 CFAP70Q5T0N1 1121 aa9.09□□□□□ -0.95
PCDH9-AS3-201ENST00000434073 CNKSR1Q969H4 720 aa9.09□□□□□ -0.95
PCDH9-AS3-201ENST00000434073 NLRP3Q96P20 1036 aa9.08□□□□□ -0.96
PCDH9-AS3-201ENST00000434073 GRIP2Q9C0E4 1043 aa9.08□□□□□ -0.96
PCDH9-AS3-201ENST00000434073 FIGNL2A6NMB9 653 aa9.07□□□□□ -0.96
PCDH9-AS3-201ENST00000434073 STAU1O95793 577 aaKnown RBP9.07□□□□□ -0.96
PCDH9-AS3-201ENST00000434073 INHAP05111 366 aa9.07□□□□□ -0.96
PCDH9-AS3-201ENST00000434073 ATP1A2P50993 1020 aa9.07□□□□□ -0.96
PCDH9-AS3-201ENST00000434073 GDF10P55107 478 aa9.07□□□□□ -0.96
PCDH9-AS3-201ENST00000434073 FHDC1Q9C0D6 1143 aaPredicted RBP9.07□□□□□ -0.96
PCDH9-AS3-201ENST00000434073 TMEM229AB2RXF0 380 aa9.06□□□□□ -0.96
PCDH9-AS3-201ENST00000434073 CLDN10P78369 228 aa9.06□□□□□ -0.96
PCDH9-AS3-201ENST00000434073 LYSMD3Q7Z3D4 306 aa9.06□□□□□ -0.96
PCDH9-AS3-201ENST00000434073 NPAS3Q8IXF0 933 aa9.06□□□□□ -0.96
PCDH9-AS3-201ENST00000434073 MKRN1Q9UHC7 482 aaKnown RBP9.06□□□□□ -0.96
PCDH9-AS3-201ENST00000434073 SPATA31C2B4DYI2 1134 aa9.05□□□□□ -0.96
PCDH9-AS3-201ENST00000434073 KANK4Q5T7N3 995 aaPredicted RBP9.05□□□□□ -0.96
PCDH9-AS3-201ENST00000434073 ZNF775Q96BV0 537 aaPredicted RBP9.05□□□□□ -0.96
PCDH9-AS3-201ENST00000434073 NXF1Q9UBU9 619 aaKnown RBP9.05□□□□□ -0.96
PCDH9-AS3-201ENST00000434073 KIAA1024Q9UPX6 916 aa9.05□□□□□ -0.96
PCDH9-AS3-201ENST00000434073 ARID3CA6NKF2 412 aa9.04□□□□□ -0.96
PCDH9-AS3-201ENST00000434073 ZBTB7BO15156 539 aaPredicted RBP9.04□□□□□ -0.96
PCDH9-AS3-201ENST00000434073 LMOD1P29536 600 aaPredicted RBP9.04□□□□□ -0.96
PCDH9-AS3-201ENST00000434073 CENPCQ03188 943 aa9.04□□□□□ -0.96
PCDH9-AS3-201ENST00000434073 SIX5Q8N196 739 aa9.04□□□□□ -0.96
PCDH9-AS3-201ENST00000434073 LARGE2Q8N3Y3 721 aa9.04□□□□□ -0.96
PCDH9-AS3-201ENST00000434073 OGFOD1Q8N543 542 aa9.04□□□□□ -0.96
PCDH9-AS3-201ENST00000434073 SLC4A9Q96Q91 983 aa9.04□□□□□ -0.96
PCDH9-AS3-201ENST00000434073 TIMELESSQ9UNS1 1208 aa9.04□□□□□ -0.96
PCDH9-AS3-201ENST00000434073 PTSQ03393 145 aa9.03□□□□□ -0.96
PCDH9-AS3-201ENST00000434073 SLC27A3Q5K4L6 730 aa9.03□□□□□ -0.96
PCDH9-AS3-201ENST00000434073 DNAAF2Q9NVR5 837 aaKnown RBP9.03□□□□□ -0.96
PCDH9-AS3-201ENST00000434073 SERPINA10Q9UK55 444 aa9.03□□□□□ -0.96
PCDH9-AS3-201ENST00000434073 SENP3-EIF4A1A0A087X0R7 540 aa9.02□□□□□ -0.97
PCDH9-AS3-201ENST00000434073 SLC35F4A4IF30 521 aa9.02□□□□□ -0.97
PCDH9-AS3-201ENST00000434073 TERTO14746 1132 aaKnown RBP9.02□□□□□ -0.97
PCDH9-AS3-201ENST00000434073 DKK1O94907 266 aa9.02□□□□□ -0.97
PCDH9-AS3-201ENST00000434073 PSME1Q06323 249 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms