RNA–Protein interactions for RNA: ENST00000433680.1

TNFAIP3-204, Transcript of TNF alpha induced protein 3, humanhuman

TSL 3

Gene TNFAIP3, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-204ENST00000433680 MEGF6O75095 1541 aa19.74■□□□□ 0.75
TNFAIP3-204ENST00000433680 KDRP35968 1356 aa19.73■□□□□ 0.75
TNFAIP3-204ENST00000433680 SULT6B1Q6IMI4 303 aa19.72■□□□□ 0.75
TNFAIP3-204ENST00000433680 ZCRB1Q8TBF4 217 aaKnown RBP19.72■□□□□ 0.75
TNFAIP3-204ENST00000433680 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.72■□□□□ 0.752e-6■□□□□ 8.4
TNFAIP3-204ENST00000433680 PKD1L3Q7Z443 1732 aa19.71■□□□□ 0.75
TNFAIP3-204ENST00000433680 U2SURPO15042 1029 aaKnown RBP19.71■□□□□ 0.75
TNFAIP3-204ENST00000433680 FAM196AQ6ZSG2 479 aa19.7■□□□□ 0.74
TNFAIP3-204ENST00000433680 SPG7Q9UQ90 795 aa19.7■□□□□ 0.74
TNFAIP3-204ENST00000433680 SHANK3Q9BYB0 1731 aa19.69■□□□□ 0.74
TNFAIP3-204ENST00000433680 BCL9O00512 1426 aa19.68■□□□□ 0.74
TNFAIP3-204ENST00000433680 AEBP1Q8IUX7 1158 aa19.68■□□□□ 0.74
TNFAIP3-204ENST00000433680 MARCH10Q8NA82 808 aaPredicted RBP19.68■□□□□ 0.74
TNFAIP3-204ENST00000433680 PCDH11XQ9BZA7 1347 aa19.68■□□□□ 0.74
TNFAIP3-204ENST00000433680 PCDH11YQ9BZA8 1340 aa19.68■□□□□ 0.74
TNFAIP3-204ENST00000433680 AMOTQ4VCS5 1084 aa19.67■□□□□ 0.74
TNFAIP3-204ENST00000433680 HMOX1P09601 288 aa19.66■□□□□ 0.74
TNFAIP3-204ENST00000433680 PLEKHO1Q53GL0 409 aaPredicted RBP19.66■□□□□ 0.74
TNFAIP3-204ENST00000433680 CCDC125Q86Z20 511 aa19.66■□□□□ 0.74
TNFAIP3-204ENST00000433680 DDX54Q8TDD1 881 aaKnown RBP19.66■□□□□ 0.74
TNFAIP3-204ENST00000433680 SOCS7O14512 581 aa19.65■□□□□ 0.74
TNFAIP3-204ENST00000433680 U2AF1L5P0DN76 240 aaPredicted RBP19.65■□□□□ 0.74
TNFAIP3-204ENST00000433680 U2AF1Q01081 240 aaKnown RBP eCLIP19.65■□□□□ 0.747e-7■■■■□ 23.3
TNFAIP3-204ENST00000433680 FAM182BQ5T319 152 aa19.65■□□□□ 0.74
TNFAIP3-204ENST00000433680 EP400Q96L91 3159 aa19.64■□□□□ 0.73
TNFAIP3-204ENST00000433680 FCHSD2O94868 740 aa19.64■□□□□ 0.73
TNFAIP3-204ENST00000433680 PNNQ9H307 717 aaKnown RBP19.63■□□□□ 0.73
TNFAIP3-204ENST00000433680 SBF2Q86WG5 1849 aa19.62■□□□□ 0.73
TNFAIP3-204ENST00000433680 IFNL2Q8IZJ0 200 aa19.62■□□□□ 0.73
TNFAIP3-204ENST00000433680 CYP27B1O15528 508 aa19.61■□□□□ 0.73
TNFAIP3-204ENST00000433680 UPF1Q92900 1129 aaKnown RBP eCLIP19.61■□□□□ 0.73
TNFAIP3-204ENST00000433680 RSPH6AQ9H0K4 717 aa19.61■□□□□ 0.73
TNFAIP3-204ENST00000433680 HSP90AB1P08238 724 aaKnown RBP19.59■□□□□ 0.73
TNFAIP3-204ENST00000433680 PHKG2P15735 406 aa19.59■□□□□ 0.73
TNFAIP3-204ENST00000433680 PRKAR2BP31323 418 aa19.59■□□□□ 0.73
TNFAIP3-204ENST00000433680 WDR43Q15061 677 aaKnown RBP eCLIP19.59■□□□□ 0.73
TNFAIP3-204ENST00000433680 NKX1-1Q15270 411 aaPredicted RBP19.59■□□□□ 0.73
TNFAIP3-204ENST00000433680 NHSQ6T4R5 1651 aa19.59■□□□□ 0.73
TNFAIP3-204ENST00000433680 NEFMP07197 916 aa19.58■□□□□ 0.72
TNFAIP3-204ENST00000433680 SF3B2Q13435 895 aaKnown RBP19.58■□□□□ 0.72
TNFAIP3-204ENST00000433680 C1orf141Q5JVX7 400 aa19.58■□□□□ 0.72
TNFAIP3-204ENST00000433680 DIEXFQ68CQ4 756 aaKnown RBP19.58■□□□□ 0.72
TNFAIP3-204ENST00000433680 ZNF530Q6P9A1 599 aaPredicted RBP19.58■□□□□ 0.72
TNFAIP3-204ENST00000433680 TNS1Q9HBL0 1735 aaKnown RBP19.57■□□□□ 0.72
TNFAIP3-204ENST00000433680 BCL11BQ9C0K0 894 aaPredicted RBP19.57■□□□□ 0.72
TNFAIP3-204ENST00000433680 DOT1LQ8TEK3 1739 aa19.56■□□□□ 0.72
TNFAIP3-204ENST00000433680 TRIM37O94972 964 aa19.56■□□□□ 0.72
TNFAIP3-204ENST00000433680 AKAP4Q5JQC9 854 aa19.56■□□□□ 0.72
TNFAIP3-204ENST00000433680 GAS2L2Q8NHY3 880 aa19.56■□□□□ 0.72
TNFAIP3-204ENST00000433680 MTHFSDQ2M296 383 aaKnown RBP19.55■□□□□ 0.72
TNFAIP3-204ENST00000433680 DCAF5Q96JK2 942 aa19.54■□□□□ 0.72
TNFAIP3-204ENST00000433680 MRS2Q9HD23 443 aa19.54■□□□□ 0.72
TNFAIP3-204ENST00000433680 ACSBG1Q96GR2 724 aa19.53■□□□□ 0.72
TNFAIP3-204ENST00000433680 PHACTR3Q96KR7 559 aa19.53■□□□□ 0.72
TNFAIP3-204ENST00000433680 PLEKHF1Q96S99 279 aa19.53■□□□□ 0.72
TNFAIP3-204ENST00000433680 ADAMTS8Q9UP79 889 aa19.52■□□□□ 0.72
TNFAIP3-204ENST00000433680 MAPK8IP3Q9UPT6 1336 aa19.51■□□□□ 0.71
TNFAIP3-204ENST00000433680 TOGARAM1Q9Y4F4 1720 aa19.51■□□□□ 0.71
TNFAIP3-204ENST00000433680 ERVV-2B6SEH9 535 aa19.51■□□□□ 0.71
TNFAIP3-204ENST00000433680 APBA3O96018 575 aa19.51■□□□□ 0.71
TNFAIP3-204ENST00000433680 BAG6P46379 1132 aa19.51■□□□□ 0.71
TNFAIP3-204ENST00000433680 PRIM1P49642 420 aaKnown RBP19.51■□□□□ 0.71
TNFAIP3-204ENST00000433680 CCDC184Q52MB2 194 aa19.51■□□□□ 0.71
TNFAIP3-204ENST00000433680 ITGB4P16144 1822 aa19.51■□□□□ 0.71
TNFAIP3-204ENST00000433680 RGPD3A6NKT7 1758 aaPredicted RBP19.5■□□□□ 0.71
TNFAIP3-204ENST00000433680 RGPD4Q7Z3J3 1758 aa19.5■□□□□ 0.71
TNFAIP3-204ENST00000433680 SCN11AQ9UI33 1791 aa19.5■□□□□ 0.71
TNFAIP3-204ENST00000433680 MAP3K5Q99683 1374 aa19.5■□□□□ 0.71
TNFAIP3-204ENST00000433680 GNAT3A8MTJ3 354 aa19.5■□□□□ 0.71
TNFAIP3-204ENST00000433680 KCNQ2O43526 872 aa19.5■□□□□ 0.71
TNFAIP3-204ENST00000433680 PNISRQ8TF01 805 aaKnown RBP19.5■□□□□ 0.71
TNFAIP3-204ENST00000433680 BTAF1O14981 1849 aa19.5■□□□□ 0.71
TNFAIP3-204ENST00000433680 ADAMTS7Q9UKP4 1686 aa19.49■□□□□ 0.71
TNFAIP3-204ENST00000433680 KAT6BQ8WYB5 2073 aa19.49■□□□□ 0.71
TNFAIP3-204ENST00000433680 SYTL4Q96C24 671 aaPredicted RBP19.49■□□□□ 0.71
TNFAIP3-204ENST00000433680 VIRMAQ69YN4 1812 aaKnown RBP19.48■□□□□ 0.71
TNFAIP3-204ENST00000433680 CCER2I3L3R5 266 aa19.48■□□□□ 0.71
TNFAIP3-204ENST00000433680 PLSCR1O15162 318 aa19.48■□□□□ 0.71
TNFAIP3-204ENST00000433680 RUNDC1Q96C34 613 aa19.48■□□□□ 0.71
TNFAIP3-204ENST00000433680 KDM6AO15550 1401 aaPredicted RBP19.48■□□□□ 0.71
TNFAIP3-204ENST00000433680 HTATSF1O43719 755 aaKnown RBP19.47■□□□□ 0.71
TNFAIP3-204ENST00000433680 MPRIPQ6WCQ1 1025 aa19.47■□□□□ 0.71
TNFAIP3-204ENST00000433680 NFE2L2Q16236 605 aa19.46■□□□□ 0.71
TNFAIP3-204ENST00000433680 PTF1AQ7RTS3 328 aa19.46■□□□□ 0.71
TNFAIP3-204ENST00000433680 TMOD3Q9NYL9 352 aa19.46■□□□□ 0.71
TNFAIP3-204ENST00000433680 RNMTO43148 476 aaKnown RBP19.45■□□□□ 0.7
TNFAIP3-204ENST00000433680 CABP4P57796 275 aa19.45■□□□□ 0.7
TNFAIP3-204ENST00000433680 RTF1Q92541 710 aaKnown RBP19.45■□□□□ 0.7
TNFAIP3-204ENST00000433680 DLG5Q8TDM6 1919 aa19.45■□□□□ 0.7
TNFAIP3-204ENST00000433680 MRC1P22897 1456 aa19.43■□□□□ 0.7
TNFAIP3-204ENST00000433680 EN1Q05925 392 aaPredicted RBP19.43■□□□□ 0.7
TNFAIP3-204ENST00000433680 DEFB132Q7Z7B7 95 aa19.43■□□□□ 0.7
TNFAIP3-204ENST00000433680 PIGBQ92521 554 aa19.43■□□□□ 0.7
TNFAIP3-204ENST00000433680 CAMKK2Q96RR4 588 aa19.43■□□□□ 0.7
TNFAIP3-204ENST00000433680 LGR6Q9HBX8 967 aa19.43■□□□□ 0.7
TNFAIP3-204ENST00000433680 CCDC146Q8IYE0 955 aa19.42■□□□□ 0.7
TNFAIP3-204ENST00000433680 SMARCC1Q92922 1105 aaPredicted RBP19.42■□□□□ 0.7
TNFAIP3-204ENST00000433680 SLC52A2Q9HAB3 445 aa19.42■□□□□ 0.7
TNFAIP3-204ENST00000433680 CEMIPQ8WUJ3 1361 aa19.42■□□□□ 0.7
TNFAIP3-204ENST00000433680 RREB1Q92766 1687 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms