RNA–Protein interactions for RNA: ENST00000433496.5

RFC4-207, Transcript of replication factor C subunit 4, humanhuman

TSL 5 BASIC

Gene RFC4, Length 1,111 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-207ENST00000433496 CASZ1Q86V15 1759 aa13.3□□□□□ -0.28
RFC4-207ENST00000433496 MEGF6O75095 1541 aa13.29□□□□□ -0.28
RFC4-207ENST00000433496 PPM1GO15355 546 aaPredicted RBP13.29□□□□□ -0.28
RFC4-207ENST00000433496 ZCRB1Q8TBF4 217 aaKnown RBP13.29□□□□□ -0.28
RFC4-207ENST00000433496 SPON1Q9HCB6 807 aa13.29□□□□□ -0.28
RFC4-207ENST00000433496 PPP1R1BQ9UD71 204 aaPredicted RBP13.29□□□□□ -0.28
RFC4-207ENST00000433496 TATP17735 454 aaPredicted RBP13.28□□□□□ -0.28
RFC4-207ENST00000433496 USHBP1Q8N6Y0 703 aa13.28□□□□□ -0.28
RFC4-207ENST00000433496 SYTL4Q96C24 671 aaPredicted RBP13.28□□□□□ -0.28
RFC4-207ENST00000433496 HSP90AB2PQ58FF8 381 aa13.27□□□□□ -0.29
RFC4-207ENST00000433496 NBPF6Q5VWK0 638 aa13.27□□□□□ -0.29
RFC4-207ENST00000433496 NBPF4Q96M43 638 aa13.27□□□□□ -0.29
RFC4-207ENST00000433496 ANO8Q9HCE9 1232 aaPredicted RBP13.27□□□□□ -0.29
RFC4-207ENST00000433496 PKD1L3Q7Z443 1732 aa13.26□□□□□ -0.29
RFC4-207ENST00000433496 EMILIN1Q9Y6C2 1016 aa13.26□□□□□ -0.29
RFC4-207ENST00000433496 LY75O60449 1722 aa13.25□□□□□ -0.29
RFC4-207ENST00000433496 PAPPAQ13219 1627 aa13.25□□□□□ -0.29
RFC4-207ENST00000433496 PCDH11XQ9BZA7 1347 aa13.25□□□□□ -0.29
RFC4-207ENST00000433496 PCDH11YQ9BZA8 1340 aa13.25□□□□□ -0.29
RFC4-207ENST00000433496 PROM2Q8N271 834 aa13.25□□□□□ -0.29
RFC4-207ENST00000433496 NSD2O96028 1365 aa13.24□□□□□ -0.29
RFC4-207ENST00000433496 TNNT2P45379 298 aaPredicted RBP13.24□□□□□ -0.29
RFC4-207ENST00000433496 SLC15A2Q16348 729 aa13.24□□□□□ -0.29
RFC4-207ENST00000433496 QSER1Q2KHR3 1735 aa13.24□□□□□ -0.29
RFC4-207ENST00000433496 ITGB4P16144 1822 aa13.23□□□□□ -0.29
RFC4-207ENST00000433496 PRIM1P49642 420 aaKnown RBP13.23□□□□□ -0.29
RFC4-207ENST00000433496 PPP4R3CPQ6ZMV5 832 aa13.23□□□□□ -0.29
RFC4-207ENST00000433496 PANK3Q9H999 370 aa13.23□□□□□ -0.29
RFC4-207ENST00000433496 WASHC2AQ641Q2 1341 aa13.22□□□□□ -0.29
RFC4-207ENST00000433496 DCAF8L1A6NGE4 600 aa13.22□□□□□ -0.29
RFC4-207ENST00000433496 SLC27A3Q5K4L6 730 aa13.22□□□□□ -0.29
RFC4-207ENST00000433496 TUBGCP6Q96RT7 1819 aa13.21□□□□□ -0.29
RFC4-207ENST00000433496 ZBTB7AO95365 584 aa13.21□□□□□ -0.29
RFC4-207ENST00000433496 POLKQ9UBT6 870 aa13.2□□□□□ -0.3
RFC4-207ENST00000433496 SPG7Q9UQ90 795 aa13.2□□□□□ -0.3
RFC4-207ENST00000433496 KNSTRNQ9Y448 316 aa13.2□□□□□ -0.3
RFC4-207ENST00000433496 C5P01031 1676 aa13.2□□□□□ -0.3
RFC4-207ENST00000433496 TOGARAM1Q9Y4F4 1720 aa13.19□□□□□ -0.3
RFC4-207ENST00000433496 MORC1Q86VD1 984 aa13.19□□□□□ -0.3
RFC4-207ENST00000433496 NCAPD2Q15021 1401 aa13.19□□□□□ -0.3
RFC4-207ENST00000433496 HMGB2P26583 209 aaKnown RBP13.18□□□□□ -0.3
RFC4-207ENST00000433496 MTFR1LQ9H019 292 aa13.18□□□□□ -0.3
RFC4-207ENST00000433496 CCNL1Q9UK58 526 aaPredicted RBP13.18□□□□□ -0.3
RFC4-207ENST00000433496 ATF5Q9Y2D1 282 aaPredicted RBP13.18□□□□□ -0.3
RFC4-207ENST00000433496 TAF1LQ8IZX4 1826 aa13.18□□□□□ -0.3
RFC4-207ENST00000433496 EYA1Q99502 592 aa13.17□□□□□ -0.3
RFC4-207ENST00000433496 PDGFDQ9GZP0 370 aaPredicted RBP13.17□□□□□ -0.3
RFC4-207ENST00000433496 LRRC4BQ9NT99 713 aa13.17□□□□□ -0.3
RFC4-207ENST00000433496 TFCP2L1Q9NZI6 479 aa13.17□□□□□ -0.3
RFC4-207ENST00000433496 EIF4A2Q14240 407 aaKnown RBP13.16□□□□□ -0.3
RFC4-207ENST00000433496 ZNF827Q17R98 1081 aa13.16□□□□□ -0.3
RFC4-207ENST00000433496 MPRIPQ6WCQ1 1025 aa13.16□□□□□ -0.3
RFC4-207ENST00000433496 KIF7Q2M1P5 1343 aa13.15□□□□□ -0.3
RFC4-207ENST00000433496 CYP27B1O15528 508 aa13.15□□□□□ -0.3
RFC4-207ENST00000433496 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.15□□□□□ -0.34e-6■■■□□ 17.2
RFC4-207ENST00000433496 PALLDQ8WX93 1383 aa13.15□□□□□ -0.3
RFC4-207ENST00000433496 PLEKHG2Q9H7P9 1386 aa13.15□□□□□ -0.3
RFC4-207ENST00000433496 KCNQ4P56696 695 aa13.14□□□□□ -0.31
RFC4-207ENST00000433496 SMARCC1Q92922 1105 aaPredicted RBP13.14□□□□□ -0.31
RFC4-207ENST00000433496 AKT1S1Q96B36 256 aa13.14□□□□□ -0.31
RFC4-207ENST00000433496 POLD1P28340 1107 aa13.13□□□□□ -0.31
RFC4-207ENST00000433496 MAPK8IP2Q13387 824 aaPredicted RBP13.13□□□□□ -0.31
RFC4-207ENST00000433496 IFNL2Q8IZJ0 200 aa13.13□□□□□ -0.31
RFC4-207ENST00000433496 SLC16A10Q8TF71 515 aa13.13□□□□□ -0.31
RFC4-207ENST00000433496 IGSF1Q8N6C5 1336 aa13.13□□□□□ -0.31
RFC4-207ENST00000433496 PTGER2P43116 358 aa13.12□□□□□ -0.31
RFC4-207ENST00000433496 TMOD3Q9NYL9 352 aa13.12□□□□□ -0.31
RFC4-207ENST00000433496 C4BP0C0L5 1744 aa13.12□□□□□ -0.31
RFC4-207ENST00000433496 PNPLA7Q6ZV29 1317 aa13.12□□□□□ -0.31
RFC4-207ENST00000433496 COL24A1Q17RW2 1714 aa13.11□□□□□ -0.31
RFC4-207ENST00000433496 NKX1-1Q15270 411 aaPredicted RBP13.11□□□□□ -0.31
RFC4-207ENST00000433496 ARXQ96QS3 562 aa13.11□□□□□ -0.31
RFC4-207ENST00000433496 HSP90AB1P08238 724 aaKnown RBP13.1□□□□□ -0.31
RFC4-207ENST00000433496 PHKG2P15735 406 aa13.1□□□□□ -0.31
RFC4-207ENST00000433496 PLEKHO1Q53GL0 409 aaPredicted RBP13.1□□□□□ -0.31
RFC4-207ENST00000433496 FHDC1Q9C0D6 1143 aaPredicted RBP13.1□□□□□ -0.31
RFC4-207ENST00000433496 VIRMAQ69YN4 1812 aaKnown RBP13.09□□□□□ -0.31
RFC4-207ENST00000433496 AMOTQ4VCS5 1084 aa13.09□□□□□ -0.31
RFC4-207ENST00000433496 UBR3Q6ZT12 1888 aa13.09□□□□□ -0.31
RFC4-207ENST00000433496 KLHL34Q8N239 644 aa13.09□□□□□ -0.31
RFC4-207ENST00000433496 PIGBQ92521 554 aa13.09□□□□□ -0.31
RFC4-207ENST00000433496 AK7Q96M32 723 aa13.09□□□□□ -0.31
RFC4-207ENST00000433496 AMER1Q5JTC6 1135 aaPredicted RBP13.08□□□□□ -0.32
RFC4-207ENST00000433496 C1orf141Q5JVX7 400 aa13.08□□□□□ -0.32
RFC4-207ENST00000433496 ZNF530Q6P9A1 599 aaPredicted RBP13.08□□□□□ -0.32
RFC4-207ENST00000433496 POTEDQ86YR6 584 aa13.08□□□□□ -0.32
RFC4-207ENST00000433496 FLAD1Q8NFF5 587 aa13.08□□□□□ -0.32
RFC4-207ENST00000433496 SGIP1Q9BQI5 828 aa13.08□□□□□ -0.32
RFC4-207ENST00000433496 CHD4Q14839 1912 aa13.07□□□□□ -0.32
RFC4-207ENST00000433496 CC2D1BQ5T0F9 858 aaKnown RBP13.07□□□□□ -0.32
RFC4-207ENST00000433496 DCAF5Q96JK2 942 aa13.07□□□□□ -0.32
RFC4-207ENST00000433496 SYT17Q9BSW7 474 aa13.07□□□□□ -0.32
RFC4-207ENST00000433496 SCN11AQ9UI33 1791 aa13.07□□□□□ -0.32
RFC4-207ENST00000433496 MAP3K5Q99683 1374 aa13.07□□□□□ -0.32
RFC4-207ENST00000433496 YY1P25490 414 aa13.06□□□□□ -0.32
RFC4-207ENST00000433496 SULT6B1Q6IMI4 303 aa13.06□□□□□ -0.32
RFC4-207ENST00000433496 ZNF831Q5JPB2 1677 aa13.05□□□□□ -0.32
RFC4-207ENST00000433496 LOC102724428A0A0B4J2F2 783 aa13.05□□□□□ -0.32
RFC4-207ENST00000433496 ERVV-2B6SEH9 535 aa13.05□□□□□ -0.32
RFC4-207ENST00000433496 MTHFSP49914 203 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms