RNA–Protein interactions for RNA: ENST00000433232.5

LINC01534-202, Transcript of long intergenic non-protein coding RNA 1534, humanhuman

TSL 3 BASIC

Gene LINC01534, Length 554 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01534-202ENST00000433232 MYT1Q01538 1121 aa24.82■■□□□ 1.56
LINC01534-202ENST00000433232 CCDC146Q8IYE0 955 aa24.82■■□□□ 1.56
LINC01534-202ENST00000433232 LRRC37A3O60309 1634 aa24.82■■□□□ 1.56
LINC01534-202ENST00000433232 BRWD3Q6RI45 1802 aa24.82■■□□□ 1.56
LINC01534-202ENST00000433232 SHANK3Q9BYB0 1731 aa24.81■■□□□ 1.56
LINC01534-202ENST00000433232 OVOS2A0A0G2JMS6 1433 aa24.81■■□□□ 1.56
LINC01534-202ENST00000433232 FCHSD2O94868 740 aa24.81■■□□□ 1.56
LINC01534-202ENST00000433232 PKD1L3Q7Z443 1732 aa24.81■■□□□ 1.56
LINC01534-202ENST00000433232 ONECUT3O60422 494 aaPredicted RBP24.8■■□□□ 1.56
LINC01534-202ENST00000433232 PHACTR3Q96KR7 559 aa24.8■■□□□ 1.56
LINC01534-202ENST00000433232 SEPT12Q8IYM1 358 aa24.79■■□□□ 1.56
LINC01534-202ENST00000433232 PLEKHF1Q96S99 279 aa24.79■■□□□ 1.56
LINC01534-202ENST00000433232 CDCA7Q9BWT1 371 aaPredicted RBP24.77■■□□□ 1.56
LINC01534-202ENST00000433232 RGS12O14924 1447 aa24.77■■□□□ 1.56
LINC01534-202ENST00000433232 SENP3-EIF4A1A0A087X0R7 540 aa24.76■■□□□ 1.55
LINC01534-202ENST00000433232 DDB1Q16531 1140 aa24.75■■□□□ 1.55
LINC01534-202ENST00000433232 ZCRB1Q8TBF4 217 aaKnown RBP24.75■■□□□ 1.55
LINC01534-202ENST00000433232 EXOC5O00471 708 aa24.74■■□□□ 1.55
LINC01534-202ENST00000433232 MTHFSDQ2M296 383 aaKnown RBP24.74■■□□□ 1.55
LINC01534-202ENST00000433232 PLEKHO1Q53GL0 409 aaPredicted RBP24.74■■□□□ 1.55
LINC01534-202ENST00000433232 TNS2Q63HR2 1409 aa24.74■■□□□ 1.55
LINC01534-202ENST00000433232 RUNDC1Q96C34 613 aa24.73■■□□□ 1.55
LINC01534-202ENST00000433232 DLG5Q8TDM6 1919 aa24.73■■□□□ 1.55
LINC01534-202ENST00000433232 DDX54Q8TDD1 881 aaKnown RBP24.72■■□□□ 1.55
LINC01534-202ENST00000433232 SPG7Q9UQ90 795 aa24.72■■□□□ 1.55
LINC01534-202ENST00000433232 ZNF530Q6P9A1 599 aaPredicted RBP24.71■■□□□ 1.55
LINC01534-202ENST00000433232 PNNQ9H307 717 aaKnown RBP24.71■■□□□ 1.55
LINC01534-202ENST00000433232 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.71■■□□□ 1.55
LINC01534-202ENST00000433232 MAPK8IP3Q9UPT6 1336 aa24.7■■□□□ 1.54
LINC01534-202ENST00000433232 CYP27B1O15528 508 aa24.7■■□□□ 1.54
LINC01534-202ENST00000433232 AMOTQ4VCS5 1084 aa24.7■■□□□ 1.54
LINC01534-202ENST00000433232 FAM182BQ5T319 152 aa24.7■■□□□ 1.54
LINC01534-202ENST00000433232 MARCH10Q8NA82 808 aaPredicted RBP24.69■■□□□ 1.54
LINC01534-202ENST00000433232 RRP7AQ9Y3A4 280 aaKnown RBP24.69■■□□□ 1.54
LINC01534-202ENST00000433232 PDE3BQ13370 1112 aa24.68■■□□□ 1.54
LINC01534-202ENST00000433232 VIRMAQ69YN4 1812 aaKnown RBP24.68■■□□□ 1.54
LINC01534-202ENST00000433232 PLEKHG2Q9H7P9 1386 aa24.67■■□□□ 1.54
LINC01534-202ENST00000433232 PCDH11XQ9BZA7 1347 aa24.67■■□□□ 1.54
LINC01534-202ENST00000433232 PCDH11YQ9BZA8 1340 aa24.67■■□□□ 1.54
LINC01534-202ENST00000433232 APAF1O14727 1248 aa24.67■■□□□ 1.54
LINC01534-202ENST00000433232 NEFMP07197 916 aa24.67■■□□□ 1.54
LINC01534-202ENST00000433232 PHKG2P15735 406 aa24.66■■□□□ 1.54
LINC01534-202ENST00000433232 TMPOP42166 694 aaKnown RBP24.65■■□□□ 1.54
LINC01534-202ENST00000433232 NFE2L2Q16236 605 aa24.65■■□□□ 1.54
LINC01534-202ENST00000433232 KRT27Q7Z3Y8 459 aa24.65■■□□□ 1.54
LINC01534-202ENST00000433232 GAS2L2Q8NHY3 880 aa24.65■■□□□ 1.54
LINC01534-202ENST00000433232 NEUROD2Q15784 382 aa24.64■■□□□ 1.54
LINC01534-202ENST00000433232 C1orf141Q5JVX7 400 aa24.64■■□□□ 1.54
LINC01534-202ENST00000433232 IFNL2Q8IZJ0 200 aa24.64■■□□□ 1.54
LINC01534-202ENST00000433232 KAT6BQ8WYB5 2073 aa24.63■■□□□ 1.53
LINC01534-202ENST00000433232 TOGARAM1Q9Y4F4 1720 aa24.62■■□□□ 1.53
LINC01534-202ENST00000433232 AKAP4Q5JQC9 854 aa24.62■■□□□ 1.53
LINC01534-202ENST00000433232 RIPK4P57078 832 aa24.61■■□□□ 1.53
LINC01534-202ENST00000433232 MAP3K5Q99683 1374 aa24.61■■□□□ 1.53
LINC01534-202ENST00000433232 SCN11AQ9UI33 1791 aa24.6■■□□□ 1.53
LINC01534-202ENST00000433232 MPRIPQ6WCQ1 1025 aa24.6■■□□□ 1.53
LINC01534-202ENST00000433232 SALL2Q9Y467 1007 aaPredicted RBP24.6■■□□□ 1.53
LINC01534-202ENST00000433232 DOT1LQ8TEK3 1739 aa24.6■■□□□ 1.53
LINC01534-202ENST00000433232 KDM6AO15550 1401 aaPredicted RBP24.6■■□□□ 1.53
LINC01534-202ENST00000433232 GNAT3A8MTJ3 354 aa24.59■■□□□ 1.53
LINC01534-202ENST00000433232 DCTN1Q14203 1278 aa24.59■■□□□ 1.53
LINC01534-202ENST00000433232 LGR6Q9HBX8 967 aa24.59■■□□□ 1.53
LINC01534-202ENST00000433232 SBF2Q86WG5 1849 aa24.58■■□□□ 1.53
LINC01534-202ENST00000433232 NKX1-1Q15270 411 aaPredicted RBP24.58■■□□□ 1.53
LINC01534-202ENST00000433232 ADAMTS7Q9UKP4 1686 aa24.57■■□□□ 1.52
LINC01534-202ENST00000433232 ITGB4P16144 1822 aa24.57■■□□□ 1.52
LINC01534-202ENST00000433232 MCM10Q7L590 875 aa24.57■■□□□ 1.52
LINC01534-202ENST00000433232 ACSBG1Q96GR2 724 aa24.57■■□□□ 1.52
LINC01534-202ENST00000433232 RNMTO43148 476 aaKnown RBP24.56■■□□□ 1.52
LINC01534-202ENST00000433232 IL17REQ8NFR9 667 aa24.56■■□□□ 1.52
LINC01534-202ENST00000433232 THUMPD2Q9BTF0 503 aaKnown RBP24.56■■□□□ 1.52
LINC01534-202ENST00000433232 TRIM35Q9UPQ4 493 aa24.56■■□□□ 1.52
LINC01534-202ENST00000433232 ILDR2Q71H61 639 aa24.54■■□□□ 1.52
LINC01534-202ENST00000433232 DCAF5Q96JK2 942 aa24.54■■□□□ 1.52
LINC01534-202ENST00000433232 HSP90AB1P08238 724 aaKnown RBP24.53■■□□□ 1.52
LINC01534-202ENST00000433232 RTF1Q92541 710 aaKnown RBP24.53■■□□□ 1.52
LINC01534-202ENST00000433232 PTF1AQ7RTS3 328 aa24.52■■□□□ 1.52
LINC01534-202ENST00000433232 KCNQ2O43526 872 aa24.51■■□□□ 1.51
LINC01534-202ENST00000433232 FAM196AQ6ZSG2 479 aa24.51■■□□□ 1.51
LINC01534-202ENST00000433232 HTATSF1O43719 755 aaKnown RBP24.5■■□□□ 1.51
LINC01534-202ENST00000433232 PRIM1P49642 420 aaKnown RBP24.5■■□□□ 1.51
LINC01534-202ENST00000433232 BCL9O00512 1426 aa24.5■■□□□ 1.51
LINC01534-202ENST00000433232 NHSQ6T4R5 1651 aa24.5■■□□□ 1.51
LINC01534-202ENST00000433232 SIPA1L3O60292 1781 aaPredicted RBP24.49■■□□□ 1.51
LINC01534-202ENST00000433232 HNRNPUQ00839 825 aaKnown RBP eCLIP24.49■■□□□ 1.51
LINC01534-202ENST00000433232 SYTL4Q96C24 671 aaPredicted RBP24.49■■□□□ 1.51
LINC01534-202ENST00000433232 CEMIPQ8WUJ3 1361 aa24.49■■□□□ 1.51
LINC01534-202ENST00000433232 LMOD3Q0VAK6 560 aa24.48■■□□□ 1.51
LINC01534-202ENST00000433232 MRC1P22897 1456 aa24.47■■□□□ 1.51
LINC01534-202ENST00000433232 WWC1Q8IX03 1113 aa24.47■■□□□ 1.51
LINC01534-202ENST00000433232 ERVV-2B6SEH9 535 aa24.46■■□□□ 1.51
LINC01534-202ENST00000433232 TRIM37O94972 964 aa24.46■■□□□ 1.51
LINC01534-202ENST00000433232 CABP4P57796 275 aa24.46■■□□□ 1.51
LINC01534-202ENST00000433232 NFATC2IPQ8NCF5 419 aa24.46■■□□□ 1.51
LINC01534-202ENST00000433232 SLC52A2Q9HAB3 445 aa24.46■■□□□ 1.51
LINC01534-202ENST00000433232 BTAF1O14981 1849 aa24.46■■□□□ 1.51
LINC01534-202ENST00000433232 CCDC27Q2M243 656 aa24.45■■□□□ 1.5
LINC01534-202ENST00000433232 TEFQ10587 303 aa24.44■■□□□ 1.5
LINC01534-202ENST00000433232 PIGBQ92521 554 aa24.44■■□□□ 1.5
LINC01534-202ENST00000433232 NCBP3Q53F19 620 aaKnown RBP24.43■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms