RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 TREML4Q6UXN2 200 aa7.25□□□□□ -1.25
CLK1-204ENST00000432425 PHTF2Q8N3S3 785 aa7.25□□□□□ -1.25
CLK1-204ENST00000432425 SLC16A10Q8TF71 515 aa7.25□□□□□ -1.25
CLK1-204ENST00000432425 CLUAP1Q96AJ1 413 aa7.25□□□□□ -1.25
CLK1-204ENST00000432425 CDCA7Q9BWT1 371 aaPredicted RBP7.25□□□□□ -1.25
CLK1-204ENST00000432425 MEN1O00255 615 aa7.24□□□□□ -1.25
CLK1-204ENST00000432425 OXLD1Q5BKU9 147 aa7.24□□□□□ -1.25
CLK1-204ENST00000432425 KDF1Q8NAX2 398 aaPredicted RBP7.24□□□□□ -1.25
CLK1-204ENST00000432425 NFX1Q12986 1120 aaKnown RBP7.23□□□□□ -1.25
CLK1-204ENST00000432425 PROSER2Q86WR7 435 aaPredicted RBP7.23□□□□□ -1.25
CLK1-204ENST00000432425 NPAS3Q8IXF0 933 aa7.23□□□□□ -1.25
CLK1-204ENST00000432425 SIRT1Q96EB6 747 aa7.23□□□□□ -1.25
CLK1-204ENST00000432425 OSBPL3Q9H4L5 887 aa7.23□□□□□ -1.25
CLK1-204ENST00000432425 TRAK2O60296 914 aa7.22□□□□□ -1.25
CLK1-204ENST00000432425 USP4Q13107 963 aa7.22□□□□□ -1.25
CLK1-204ENST00000432425 MAP7D1Q3KQU3 841 aa7.22□□□□□ -1.25
CLK1-204ENST00000432425 PLPP7Q8NBV4 271 aa7.22□□□□□ -1.25
CLK1-204ENST00000432425 RNF217Q8TC41 542 aa7.22□□□□□ -1.25
CLK1-204ENST00000432425 NLRP3Q96P20 1036 aa7.22□□□□□ -1.25
CLK1-204ENST00000432425 ALG2Q9H553 416 aa7.22□□□□□ -1.25
CLK1-204ENST00000432425 A0A1W2PRU2 124 aa7.22□□□□□ -1.25
CLK1-204ENST00000432425 POM121CA8CG34 1229 aa7.22□□□□□ -1.25
CLK1-204ENST00000432425 VEGFBP49765 207 aa7.22□□□□□ -1.25
CLK1-204ENST00000432425 TSGA10IPQ3SY00 556 aa7.22□□□□□ -1.25
CLK1-204ENST00000432425 FOXD4L5Q5VV16 416 aaPredicted RBP7.22□□□□□ -1.25
CLK1-204ENST00000432425 ARHGEF10LQ9HCE6 1279 aa7.22□□□□□ -1.25
CLK1-204ENST00000432425 CHIC2Q9UKJ5 165 aa7.22□□□□□ -1.25
CLK1-204ENST00000432425 GNRH1P01148 92 aa7.21□□□□□ -1.26
CLK1-204ENST00000432425 H3BM21 787 aa7.2□□□□□ -1.26
CLK1-204ENST00000432425 RNF144AP50876 292 aaPredicted RBP7.2□□□□□ -1.26
CLK1-204ENST00000432425 LYSMD3Q7Z3D4 306 aa7.2□□□□□ -1.26
CLK1-204ENST00000432425 PIK3CDO00329 1044 aa7.19□□□□□ -1.26
CLK1-204ENST00000432425 SKIP12755 728 aa7.19□□□□□ -1.26
CLK1-204ENST00000432425 GPC1P35052 558 aa7.19□□□□□ -1.26
CLK1-204ENST00000432425 PTSQ03393 145 aa7.19□□□□□ -1.26
CLK1-204ENST00000432425 CLN3Q13286 438 aa7.19□□□□□ -1.26
CLK1-204ENST00000432425 SLC27A3Q5K4L6 730 aa7.19□□□□□ -1.26
CLK1-204ENST00000432425 RAB6BQ9NRW1 208 aa7.19□□□□□ -1.26
CLK1-204ENST00000432425 A6NJR5 290 aa7.19□□□□□ -1.26
CLK1-204ENST00000432425 PPFIA3O75145 1194 aa7.19□□□□□ -1.26
CLK1-204ENST00000432425 HDGFL1Q5TGJ6 251 aa7.19□□□□□ -1.26
CLK1-204ENST00000432425 IRF7Q92985 503 aa7.19□□□□□ -1.26
CLK1-204ENST00000432425 EML3Q32P44 896 aa7.18□□□□□ -1.26
CLK1-204ENST00000432425 ESCO1Q5FWF5 840 aa7.18□□□□□ -1.26
CLK1-204ENST00000432425 PRICKLE2Q7Z3G6 844 aa7.18□□□□□ -1.26
CLK1-204ENST00000432425 FNBP4Q8N3X1 1017 aaPredicted RBP7.18□□□□□ -1.26
CLK1-204ENST00000432425 NFATC2IPQ8NCF5 419 aa7.18□□□□□ -1.26
CLK1-204ENST00000432425 LCE2AQ5TA79 106 aaPredicted RBP7.17□□□□□ -1.26
CLK1-204ENST00000432425 ADAMTS19Q8TE59 1207 aa7.17□□□□□ -1.26
CLK1-204ENST00000432425 CNKSR1Q969H4 720 aa7.17□□□□□ -1.26
CLK1-204ENST00000432425 LZTS3O60299 673 aaPredicted RBP7.16□□□□□ -1.26
CLK1-204ENST00000432425 CCDC155Q8N6L0 562 aa7.16□□□□□ -1.26
CLK1-204ENST00000432425 ESYT1Q9BSJ8 1104 aa7.16□□□□□ -1.26
CLK1-204ENST00000432425 IL2RAP01589 272 aa7.16□□□□□ -1.26
CLK1-204ENST00000432425 GTF2E1P29083 439 aaPredicted RBP7.16□□□□□ -1.26
CLK1-204ENST00000432425 GLMNQ92990 594 aa7.16□□□□□ -1.26
CLK1-204ENST00000432425 NOD1Q9Y239 953 aa7.16□□□□□ -1.26
CLK1-204ENST00000432425 SLC35F4A4IF30 521 aa7.15□□□□□ -1.27
CLK1-204ENST00000432425 USP17L5A8MUK1 530 aa7.15□□□□□ -1.27
CLK1-204ENST00000432425 RHOQP17081 205 aa7.15□□□□□ -1.27
CLK1-204ENST00000432425 XAGE2Q96GT9 111 aa7.15□□□□□ -1.27
CLK1-204ENST00000432425 ERBB4Q15303 1308 aa7.14□□□□□ -1.27
CLK1-204ENST00000432425 CENPCQ03188 943 aa7.14□□□□□ -1.27
CLK1-204ENST00000432425 NCOA4Q13772 614 aa7.14□□□□□ -1.27
CLK1-204ENST00000432425 GRIP2Q9C0E4 1043 aa7.14□□□□□ -1.27
CLK1-204ENST00000432425 ETNK1Q9HBU6 452 aa7.14□□□□□ -1.27
CLK1-204ENST00000432425 GDF10P55107 478 aa7.13□□□□□ -1.27
CLK1-204ENST00000432425 LCE2CQ5TA81 110 aa7.13□□□□□ -1.27
CLK1-204ENST00000432425 DEPDC4Q8N2C3 294 aa7.13□□□□□ -1.27
CLK1-204ENST00000432425 ZSCAN10Q96SZ4 725 aaPredicted RBP7.13□□□□□ -1.27
CLK1-204ENST00000432425 SENP3-EIF4A1A0A087X0R7 540 aa7.12□□□□□ -1.27
CLK1-204ENST00000432425 ATP9BO43861 1147 aa7.12□□□□□ -1.27
CLK1-204ENST00000432425 STAU1O95793 577 aaKnown RBP7.12□□□□□ -1.27
CLK1-204ENST00000432425 VSIG8P0DPA2 414 aa7.12□□□□□ -1.27
CLK1-204ENST00000432425 ITGA6P23229 1130 aa7.12□□□□□ -1.27
CLK1-204ENST00000432425 POU4F2Q12837 409 aa7.12□□□□□ -1.27
CLK1-204ENST00000432425 TBC1D9Q6ZT07 1266 aa7.12□□□□□ -1.27
CLK1-204ENST00000432425 TAS1R3Q7RTX0 852 aa7.12□□□□□ -1.27
CLK1-204ENST00000432425 CALR3Q96L12 384 aaKnown RBP7.12□□□□□ -1.27
CLK1-204ENST00000432425 UCN2Q96RP3 112 aa7.12□□□□□ -1.27
CLK1-204ENST00000432425 SPATA31C2B4DYI2 1134 aa7.12□□□□□ -1.27
CLK1-204ENST00000432425 WASLO00401 505 aaPredicted RBP7.12□□□□□ -1.27
CLK1-204ENST00000432425 WIPF1O43516 503 aa7.12□□□□□ -1.27
CLK1-204ENST00000432425 GMPRP36959 345 aa7.12□□□□□ -1.27
CLK1-204ENST00000432425 GTF2IP78347 998 aa7.12□□□□□ -1.27
CLK1-204ENST00000432425 PSME1Q06323 249 aa7.12□□□□□ -1.27
CLK1-204ENST00000432425 TLR1Q15399 786 aa7.12□□□□□ -1.27
CLK1-204ENST00000432425 GNASQ5JWF2 1037 aa7.12□□□□□ -1.27
CLK1-204ENST00000432425 TMEM214Q6NUQ4 689 aaKnown RBP7.12□□□□□ -1.27
CLK1-204ENST00000432425 NBPF10Q6P3W6 841 aaKnown RBP7.12□□□□□ -1.27
CLK1-204ENST00000432425 PLEKHM2Q8IWE5 1019 aa7.12□□□□□ -1.27
CLK1-204ENST00000432425 NBPF15Q8N660 670 aa7.12□□□□□ -1.27
CLK1-204ENST00000432425 CDC14CA4D256 554 aa7.11□□□□□ -1.27
CLK1-204ENST00000432425 USP17L3A6NCW0 530 aa7.11□□□□□ -1.27
CLK1-204ENST00000432425 USP17L4A6NCW7 530 aa7.11□□□□□ -1.27
CLK1-204ENST00000432425 INHAP05111 366 aa7.11□□□□□ -1.27
CLK1-204ENST00000432425 SCNN1DP51172 638 aa7.11□□□□□ -1.27
CLK1-204ENST00000432425 USP17L2Q6R6M4 530 aa7.11□□□□□ -1.27
CLK1-204ENST00000432425 USP17L1Q7RTZ2 530 aa7.11□□□□□ -1.27
CLK1-204ENST00000432425 TRIM50Q86XT4 487 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms